RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 SLC12A5Q9H2X9 1139 aa18.12■□□□□ 0.49
MTHFD1-208ENST00000554739 TRPM3Q9HCF6 1732 aaPredicted RBP18.12■□□□□ 0.49
MTHFD1-208ENST00000554739 TMC1Q8TDI8 760 aa18.11■□□□□ 0.49
MTHFD1-208ENST00000554739 BRD4O60885 1362 aaPredicted RBP18.11■□□□□ 0.49
MTHFD1-208ENST00000554739 USP6P35125 1406 aa18.1■□□□□ 0.49
MTHFD1-208ENST00000554739 CPSF1Q10570 1443 aaKnown RBP18.1■□□□□ 0.49
MTHFD1-208ENST00000554739 SSH2Q76I76 1423 aa18.1■□□□□ 0.49
MTHFD1-208ENST00000554739 AFF2P51816 1311 aa18.1■□□□□ 0.49
MTHFD1-208ENST00000554739 EIF4G2P78344 907 aaKnown RBP eCLIP18.1■□□□□ 0.49
MTHFD1-208ENST00000554739 ZNF772Q68DY9 489 aaPredicted RBP18.1■□□□□ 0.49
MTHFD1-208ENST00000554739 FNBP4Q8N3X1 1017 aaPredicted RBP18.1■□□□□ 0.49
MTHFD1-208ENST00000554739 ABTB2Q8N961 1025 aa18.1■□□□□ 0.49
MTHFD1-208ENST00000554739 HSPA5P11021 654 aaKnown RBP18.09■□□□□ 0.49
MTHFD1-208ENST00000554739 HAP1P54257 671 aaPredicted RBP18.08■□□□□ 0.48
MTHFD1-208ENST00000554739 NUTM2GQ5VZR2 741 aa18.08■□□□□ 0.48
MTHFD1-208ENST00000554739 ALS2Q96Q42 1657 aa18.07■□□□□ 0.48
MTHFD1-208ENST00000554739 CDCA8Q53HL2 280 aa18.07■□□□□ 0.48
MTHFD1-208ENST00000554739 KTN1Q86UP2 1357 aaKnown RBP18.06■□□□□ 0.48
MTHFD1-208ENST00000554739 TTC21BQ7Z4L5 1316 aa18.06■□□□□ 0.48
MTHFD1-208ENST00000554739 CD163L1Q9NR16 1453 aa18.06■□□□□ 0.48
MTHFD1-208ENST00000554739 FAM83GA6ND36 823 aa18.05■□□□□ 0.48
MTHFD1-208ENST00000554739 NLRP13Q86W25 1043 aa18.05■□□□□ 0.48
MTHFD1-208ENST00000554739 TERF2IPQ9NYB0 399 aa18.05■□□□□ 0.48
MTHFD1-208ENST00000554739 USP21Q9UK80 565 aa18.05■□□□□ 0.48
MTHFD1-208ENST00000554739 HDGFL2Q7Z4V5 671 aaPredicted RBP18.04■□□□□ 0.48
MTHFD1-208ENST00000554739 QTRT2Q9H974 415 aaKnown RBP18.04■□□□□ 0.48
MTHFD1-208ENST00000554739 NINLQ9Y2I6 1382 aa18.04■□□□□ 0.48
MTHFD1-208ENST00000554739 NLRP6P59044 892 aa18.03■□□□□ 0.48
MTHFD1-208ENST00000554739 USP19O94966 1318 aa18.02■□□□□ 0.48
MTHFD1-208ENST00000554739 TTC21AQ8NDW8 1320 aa18.02■□□□□ 0.48
MTHFD1-208ENST00000554739 BCL9LQ86UU0 1499 aa18.01■□□□□ 0.47
MTHFD1-208ENST00000554739 A0A1W2PP64 1363 aa18.01■□□□□ 0.47
MTHFD1-208ENST00000554739 GCP02774 474 aa18■□□□□ 0.47
MTHFD1-208ENST00000554739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18■□□□□ 0.47
MTHFD1-208ENST00000554739 SLIT2O94813 1529 aa17.99■□□□□ 0.47
MTHFD1-208ENST00000554739 RXRBP28702 533 aa17.99■□□□□ 0.47
MTHFD1-208ENST00000554739 ZC3H6P61129 1189 aaKnown RBP17.99■□□□□ 0.47
MTHFD1-208ENST00000554739 UNC5CLQ8IV45 518 aa17.99■□□□□ 0.47
MTHFD1-208ENST00000554739 TRPC5Q9UL62 973 aaPredicted RBP17.99■□□□□ 0.47
MTHFD1-208ENST00000554739 C11orf95C9JLR9 678 aaPredicted RBP17.98■□□□□ 0.47
MTHFD1-208ENST00000554739 ANKRD36BQ8N2N9 1353 aa17.97■□□□□ 0.47
MTHFD1-208ENST00000554739 KIAA0232Q92628 1395 aa17.97■□□□□ 0.47
MTHFD1-208ENST00000554739 RBM6P78332 1123 aaKnown RBP17.97■□□□□ 0.47
MTHFD1-208ENST00000554739 NME9Q86XW9 330 aa17.97■□□□□ 0.47
MTHFD1-208ENST00000554739 PRDM11Q9NQV5 511 aa17.97■□□□□ 0.47
MTHFD1-208ENST00000554739 ZRANB1Q9UGI0 708 aa17.97■□□□□ 0.47
MTHFD1-208ENST00000554739 EDC4Q6P2E9 1401 aaKnown RBP17.97■□□□□ 0.47
MTHFD1-208ENST00000554739 AKAP12Q02952 1782 aa17.96■□□□□ 0.47
MTHFD1-208ENST00000554739 ABCA3Q99758 1704 aa17.96■□□□□ 0.47
MTHFD1-208ENST00000554739 BTG4Q9NY30 223 aa17.96■□□□□ 0.47
MTHFD1-208ENST00000554739 CRYBG1Q9Y4K1 1723 aa17.95■□□□□ 0.46
MTHFD1-208ENST00000554739 USP31Q70CQ4 1352 aa17.95■□□□□ 0.46
MTHFD1-208ENST00000554739 CHRNA2Q15822 529 aa17.95■□□□□ 0.46
MTHFD1-208ENST00000554739 ATRNO75882 1429 aa17.95■□□□□ 0.46
MTHFD1-208ENST00000554739 CPDO75976 1380 aa17.94■□□□□ 0.46
MTHFD1-208ENST00000554739 CARD14Q9BXL6 1004 aa17.94■□□□□ 0.46
MTHFD1-208ENST00000554739 MARF1Q9Y4F3 1742 aaKnown RBP17.94■□□□□ 0.46
MTHFD1-208ENST00000554739 PIK3C2AO00443 1686 aa17.93■□□□□ 0.46
MTHFD1-208ENST00000554739 MON2Q7Z3U7 1717 aa17.93■□□□□ 0.46
MTHFD1-208ENST00000554739 NRKQ7Z2Y5 1582 aa17.93■□□□□ 0.46
MTHFD1-208ENST00000554739 VPS72Q15906 364 aa17.93■□□□□ 0.46
MTHFD1-208ENST00000554739 KCNH5Q8NCM2 988 aa17.93■□□□□ 0.46
MTHFD1-208ENST00000554739 GJD4Q96KN9 370 aaPredicted RBP17.93■□□□□ 0.46
MTHFD1-208ENST00000554739 POLR3GLQ9BT43 218 aa17.93■□□□□ 0.46
MTHFD1-208ENST00000554739 SLIT3O75094 1523 aa17.92■□□□□ 0.46
MTHFD1-208ENST00000554739 SOCS7O14512 581 aa17.91■□□□□ 0.46
MTHFD1-208ENST00000554739 ARHGEF25Q86VW2 580 aa17.91■□□□□ 0.46
MTHFD1-208ENST00000554739 PHRF1Q9P1Y6 1649 aaKnown RBP17.9■□□□□ 0.46
MTHFD1-208ENST00000554739 FYB1O15117 783 aa17.9■□□□□ 0.46
MTHFD1-208ENST00000554739 SOX12O15370 315 aa17.89■□□□□ 0.45
MTHFD1-208ENST00000554739 COL14A1Q05707 1796 aaKnown RBP17.89■□□□□ 0.45
MTHFD1-208ENST00000554739 AATKQ6ZMQ8 1374 aa17.88■□□□□ 0.45
MTHFD1-208ENST00000554739 CDK12Q9NYV4 1490 aaPredicted RBP17.88■□□□□ 0.45
MTHFD1-208ENST00000554739 COG3Q96JB2 828 aa17.87■□□□□ 0.45
MTHFD1-208ENST00000554739 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
MTHFD1-208ENST00000554739 KIF7Q2M1P5 1343 aa17.87■□□□□ 0.45
MTHFD1-208ENST00000554739 OVOS2A0A0J9YW53 1432 aa17.87■□□□□ 0.45
MTHFD1-208ENST00000554739 OVOS2Q6IE36 1432 aa17.87■□□□□ 0.45
MTHFD1-208ENST00000554739 ZBTB7CA1YPR0 619 aa17.86■□□□□ 0.45
MTHFD1-208ENST00000554739 ONECUT3O60422 494 aaPredicted RBP17.86■□□□□ 0.45
MTHFD1-208ENST00000554739 EVA1CP58658 441 aa17.86■□□□□ 0.45
MTHFD1-208ENST00000554739 GGNBP2Q9H3C7 697 aa17.86■□□□□ 0.45
MTHFD1-208ENST00000554739 PANK3Q9H999 370 aa17.86■□□□□ 0.45
MTHFD1-208ENST00000554739 STRN4Q9NRL3 753 aa17.86■□□□□ 0.45
MTHFD1-208ENST00000554739 AXIN2Q9Y2T1 843 aa17.86■□□□□ 0.45
MTHFD1-208ENST00000554739 CAMTA1Q9Y6Y1 1673 aa17.86■□□□□ 0.45
MTHFD1-208ENST00000554739 NWD2Q9ULI1 1742 aa17.86■□□□□ 0.45
MTHFD1-208ENST00000554739 PLCH1Q4KWH8 1693 aa17.85■□□□□ 0.45
MTHFD1-208ENST00000554739 SPATA31A5Q5VU36 1347 aa17.85■□□□□ 0.45
MTHFD1-208ENST00000554739 SPATA31A7Q8IWB4 1347 aa17.85■□□□□ 0.45
MTHFD1-208ENST00000554739 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.85■□□□□ 0.45
MTHFD1-208ENST00000554739 MYOM1P52179 1685 aa17.84■□□□□ 0.45
MTHFD1-208ENST00000554739 RGS12O14924 1447 aa17.84■□□□□ 0.45
MTHFD1-208ENST00000554739 NSD3Q9BZ95 1437 aa17.84■□□□□ 0.45
MTHFD1-208ENST00000554739 NFAT5O94916 1531 aa17.83■□□□□ 0.45
MTHFD1-208ENST00000554739 LARP1Q6PKG0 1096 aaKnown RBP17.83■□□□□ 0.44
MTHFD1-208ENST00000554739 SPATA31A1Q5TZJ5 1347 aa17.82■□□□□ 0.44
MTHFD1-208ENST00000554739 FBLN1P23142 703 aa17.82■□□□□ 0.44
MTHFD1-208ENST00000554739 GLI3P10071 1580 aa17.82■□□□□ 0.44
MTHFD1-208ENST00000554739 USP54Q70EL1 1684 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 854.5 ms