RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 ABTB2Q8N961 1025 aa19.27■□□□□ 0.68
NUMB-209ENST00000554315 HDGFL2Q7Z4V5 671 aaPredicted RBP19.25■□□□□ 0.67
NUMB-209ENST00000554315 TERF2IPQ9NYB0 399 aa19.25■□□□□ 0.67
NUMB-209ENST00000554315 NLRP13Q86W25 1043 aa19.25■□□□□ 0.67
NUMB-209ENST00000554315 CABLES1Q8TDN4 633 aa19.25■□□□□ 0.67
NUMB-209ENST00000554315 AFF2P51816 1311 aa19.25■□□□□ 0.67
NUMB-209ENST00000554315 COL22A1Q8NFW1 1626 aaPredicted RBP19.24■□□□□ 0.67
NUMB-209ENST00000554315 PLEKHG5O94827 1062 aa19.24■□□□□ 0.67
NUMB-209ENST00000554315 FNBP4Q8N3X1 1017 aaPredicted RBP19.24■□□□□ 0.67
NUMB-209ENST00000554315 SLC12A5Q9H2X9 1139 aa19.22■□□□□ 0.67
NUMB-209ENST00000554315 POTEAQ6S8J7 498 aa19.22■□□□□ 0.67
NUMB-209ENST00000554315 ILDR2Q71H61 639 aa19.22■□□□□ 0.67
NUMB-209ENST00000554315 USP21Q9UK80 565 aa19.22■□□□□ 0.67
NUMB-209ENST00000554315 TOPAZ1Q8N9V7 1692 aa19.21■□□□□ 0.67
NUMB-209ENST00000554315 NINLQ9Y2I6 1382 aa19.21■□□□□ 0.67
NUMB-209ENST00000554315 QTRT2Q9H974 415 aaKnown RBP19.21■□□□□ 0.67
NUMB-209ENST00000554315 USP6P35125 1406 aa19.2■□□□□ 0.66
NUMB-209ENST00000554315 KTN1Q86UP2 1357 aaKnown RBP19.2■□□□□ 0.66
NUMB-209ENST00000554315 TTC21AQ8NDW8 1320 aa19.2■□□□□ 0.66
NUMB-209ENST00000554315 NLRP6P59044 892 aa19.2■□□□□ 0.66
NUMB-209ENST00000554315 TTC21BQ7Z4L5 1316 aa19.19■□□□□ 0.66
NUMB-209ENST00000554315 RXRBP28702 533 aa19.19■□□□□ 0.66
NUMB-209ENST00000554315 NUTM2GQ5VZR2 741 aa19.19■□□□□ 0.66
NUMB-209ENST00000554315 CPSF1Q10570 1443 aaKnown RBP19.19■□□□□ 0.66
NUMB-209ENST00000554315 HSPA5P11021 654 aaKnown RBP19.18■□□□□ 0.66
NUMB-209ENST00000554315 TRPC5Q9UL62 973 aaPredicted RBP19.18■□□□□ 0.66
NUMB-209ENST00000554315 TRPM3Q9HCF6 1732 aaPredicted RBP19.18■□□□□ 0.66
NUMB-209ENST00000554315 FAM83GA6ND36 823 aa19.16■□□□□ 0.66
NUMB-209ENST00000554315 RBM6P78332 1123 aaKnown RBP19.15■□□□□ 0.66
NUMB-209ENST00000554315 UNC5CLQ8IV45 518 aa19.15■□□□□ 0.66
NUMB-209ENST00000554315 SSH2Q76I76 1423 aa19.15■□□□□ 0.66
NUMB-209ENST00000554315 GCP02774 474 aa19.14■□□□□ 0.66
NUMB-209ENST00000554315 ALS2Q96Q42 1657 aa19.14■□□□□ 0.65
NUMB-209ENST00000554315 PRDM11Q9NQV5 511 aa19.14■□□□□ 0.65
NUMB-209ENST00000554315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.13■□□□□ 0.651e-7■■□□□ 14.4
NUMB-209ENST00000554315 KCNH5Q8NCM2 988 aa19.13■□□□□ 0.65
NUMB-209ENST00000554315 ZC3H6P61129 1189 aaKnown RBP19.12■□□□□ 0.65
NUMB-209ENST00000554315 USP19O94966 1318 aa19.12■□□□□ 0.65
NUMB-209ENST00000554315 EDC4Q6P2E9 1401 aaKnown RBP19.1■□□□□ 0.65
NUMB-209ENST00000554315 BTG4Q9NY30 223 aa19.1■□□□□ 0.65
NUMB-209ENST00000554315 POLR3GLQ9BT43 218 aa19.09■□□□□ 0.65
NUMB-209ENST00000554315 BCL9LQ86UU0 1499 aa19.09■□□□□ 0.65
NUMB-209ENST00000554315 A0A1W2PP64 1363 aa19.09■□□□□ 0.65
NUMB-209ENST00000554315 ANKRD36BQ8N2N9 1353 aa19.09■□□□□ 0.65
NUMB-209ENST00000554315 SOCS7O14512 581 aa19.08■□□□□ 0.65
NUMB-209ENST00000554315 GJD4Q96KN9 370 aaPredicted RBP19.08■□□□□ 0.65
NUMB-209ENST00000554315 SLIT2O94813 1529 aa19.08■□□□□ 0.65
NUMB-209ENST00000554315 KIAA0232Q92628 1395 aa19.08■□□□□ 0.65
NUMB-209ENST00000554315 CD163L1Q9NR16 1453 aa19.08■□□□□ 0.64
NUMB-209ENST00000554315 VPS72Q15906 364 aa19.08■□□□□ 0.64
NUMB-209ENST00000554315 EVA1CP58658 441 aa19.07■□□□□ 0.64
NUMB-209ENST00000554315 CCDC9Q9Y3X0 531 aaKnown RBP19.07■□□□□ 0.64
NUMB-209ENST00000554315 CPDO75976 1380 aa19.07■□□□□ 0.64
NUMB-209ENST00000554315 USP31Q70CQ4 1352 aa19.06■□□□□ 0.64
NUMB-209ENST00000554315 MARF1Q9Y4F3 1742 aaKnown RBP19.06■□□□□ 0.64
NUMB-209ENST00000554315 NME9Q86XW9 330 aa19.05■□□□□ 0.64
NUMB-209ENST00000554315 ATRNO75882 1429 aa19.05■□□□□ 0.64
NUMB-209ENST00000554315 AKAP12Q02952 1782 aa19.05■□□□□ 0.64
NUMB-209ENST00000554315 CHRNA2Q15822 529 aa19.05■□□□□ 0.64
NUMB-209ENST00000554315 COG3Q96JB2 828 aa19.04■□□□□ 0.64
NUMB-209ENST00000554315 ZBTB7CA1YPR0 619 aa19.03■□□□□ 0.64
NUMB-209ENST00000554315 CDK12Q9NYV4 1490 aaPredicted RBP19.02■□□□□ 0.64
NUMB-209ENST00000554315 ARHGEF25Q86VW2 580 aa19.02■□□□□ 0.63
NUMB-209ENST00000554315 SOX12O15370 315 aa19.01■□□□□ 0.63
NUMB-209ENST00000554315 ZRANB1Q9UGI0 708 aa19.01■□□□□ 0.63
NUMB-209ENST00000554315 COL14A1Q05707 1796 aaKnown RBP19.01■□□□□ 0.63
NUMB-209ENST00000554315 AATKQ6ZMQ8 1374 aa19.01■□□□□ 0.63
NUMB-209ENST00000554315 STRN4Q9NRL3 753 aa19■□□□□ 0.63
NUMB-209ENST00000554315 MON2Q7Z3U7 1717 aa19■□□□□ 0.63
NUMB-209ENST00000554315 ABCA3Q99758 1704 aa19■□□□□ 0.63
NUMB-209ENST00000554315 FYB1O15117 783 aa19■□□□□ 0.63
NUMB-209ENST00000554315 SLIT3O75094 1523 aa18.98■□□□□ 0.63
NUMB-209ENST00000554315 C11orf95C9JLR9 678 aaPredicted RBP18.98■□□□□ 0.63
NUMB-209ENST00000554315 ONECUT3O60422 494 aaPredicted RBP18.98■□□□□ 0.63
NUMB-209ENST00000554315 CARD14Q9BXL6 1004 aa18.98■□□□□ 0.63
NUMB-209ENST00000554315 NWD2Q9ULI1 1742 aa18.98■□□□□ 0.63
NUMB-209ENST00000554315 PIK3C2AO00443 1686 aa18.98■□□□□ 0.63
NUMB-209ENST00000554315 PHRF1Q9P1Y6 1649 aaKnown RBP18.98■□□□□ 0.63
NUMB-209ENST00000554315 CRYBG1Q9Y4K1 1723 aa18.97■□□□□ 0.63
NUMB-209ENST00000554315 PANK3Q9H999 370 aa18.97■□□□□ 0.63
NUMB-209ENST00000554315 CGNL1Q0VF96 1302 aa18.96■□□□□ 0.63
NUMB-209ENST00000554315 SPATA31A5Q5VU36 1347 aa18.96■□□□□ 0.63
NUMB-209ENST00000554315 SPATA31A7Q8IWB4 1347 aa18.96■□□□□ 0.63
NUMB-209ENST00000554315 NRKQ7Z2Y5 1582 aa18.96■□□□□ 0.63
NUMB-209ENST00000554315 ZEB1P37275 1124 aaPredicted RBP18.96■□□□□ 0.63
NUMB-209ENST00000554315 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.95■□□□□ 0.62
NUMB-209ENST00000554315 GGNBP2Q9H3C7 697 aa18.95■□□□□ 0.62
NUMB-209ENST00000554315 THRAP3Q9Y2W1 955 aaKnown RBP18.94■□□□□ 0.62
NUMB-209ENST00000554315 KIF7Q2M1P5 1343 aa18.93■□□□□ 0.62
NUMB-209ENST00000554315 SEPT12Q8IYM1 358 aa18.93■□□□□ 0.62
NUMB-209ENST00000554315 AXIN2Q9Y2T1 843 aa18.93■□□□□ 0.62
NUMB-209ENST00000554315 PLCH1Q4KWH8 1693 aa18.93■□□□□ 0.62
NUMB-209ENST00000554315 SPATA31A1Q5TZJ5 1347 aa18.93■□□□□ 0.62
NUMB-209ENST00000554315 A0A0G2JS52 829 aa18.92■□□□□ 0.62
NUMB-209ENST00000554315 MYT1Q01538 1121 aa18.92■□□□□ 0.62
NUMB-209ENST00000554315 FAM98CQ17RN3 349 aaKnown RBP18.92■□□□□ 0.62
NUMB-209ENST00000554315 LARP1Q6PKG0 1096 aaKnown RBP18.92■□□□□ 0.62
NUMB-209ENST00000554315 OVOS2A0A0J9YW53 1432 aa18.92■□□□□ 0.62
NUMB-209ENST00000554315 OVOS2Q6IE36 1432 aa18.92■□□□□ 0.62
NUMB-209ENST00000554315 NSD3Q9BZ95 1437 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms