RNA–Protein interactions for RNA: ENST00000553964.5

CALM1-207, Transcript of calmodulin 1, humanhuman

TSL 1 (best)

Gene CALM1, Length 2,670 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-207ENST00000553964 CABP1Q9NZU7 370 aa24.69■■□□□ 1.54
CALM1-207ENST00000553964 YTHDC2Q9H6S0 1430 aaKnown RBP24.69■■□□□ 1.54
CALM1-207ENST00000553964 CDK19Q9BWU1 502 aa24.69■■□□□ 1.54
CALM1-207ENST00000553964 VIRMAQ69YN4 1812 aaKnown RBP24.68■■□□□ 1.54
CALM1-207ENST00000553964 USP32Q8NFA0 1604 aa24.68■■□□□ 1.54
CALM1-207ENST00000553964 WDR63Q8IWG1 891 aa24.68■■□□□ 1.54
CALM1-207ENST00000553964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.68■■□□□ 1.54
CALM1-207ENST00000553964 ABCC11Q96J66 1382 aa24.67■■□□□ 1.54
CALM1-207ENST00000553964 NLRP1Q9C000 1473 aa24.66■■□□□ 1.54
CALM1-207ENST00000553964 BECN1Q14457 450 aa24.66■■□□□ 1.54
CALM1-207ENST00000553964 PUS7Q96PZ0 661 aaKnown RBP24.66■■□□□ 1.54
CALM1-207ENST00000553964 ZFYVE9O95405 1425 aa24.65■■□□□ 1.54
CALM1-207ENST00000553964 CD163L1Q9NR16 1453 aa24.64■■□□□ 1.54
CALM1-207ENST00000553964 SPRYD3Q8NCJ5 442 aa24.63■■□□□ 1.53
CALM1-207ENST00000553964 TERF2IPQ9NYB0 399 aa24.62■■□□□ 1.53
CALM1-207ENST00000553964 NSD2O96028 1365 aa24.62■■□□□ 1.53
CALM1-207ENST00000553964 PLEKHF1Q96S99 279 aa24.62■■□□□ 1.53
CALM1-207ENST00000553964 UPF2Q9HAU5 1272 aaKnown RBP24.61■■□□□ 1.53
CALM1-207ENST00000553964 RWDD1Q9H446 243 aaPredicted RBP24.61■■□□□ 1.53
CALM1-207ENST00000553964 MYH16Q9H6N6 1097 aa24.61■■□□□ 1.53
CALM1-207ENST00000553964 FTSJ3Q8IY81 847 aaKnown RBP24.6■■□□□ 1.53
CALM1-207ENST00000553964 ALKQ9UM73 1620 aa24.6■■□□□ 1.53
CALM1-207ENST00000553964 TMPOP42166 694 aaKnown RBP24.6■■□□□ 1.53
CALM1-207ENST00000553964 TRIM35Q9UPQ4 493 aa24.6■■□□□ 1.53
CALM1-207ENST00000553964 MVPQ14764 893 aaKnown RBP24.59■■□□□ 1.53
CALM1-207ENST00000553964 CCDC27Q2M243 656 aa24.59■■□□□ 1.53
CALM1-207ENST00000553964 TBC1D32Q96NH3 1257 aa24.59■■□□□ 1.53
CALM1-207ENST00000553964 EXOSC9Q06265 439 aaKnown RBP24.59■■□□□ 1.53
CALM1-207ENST00000553964 TBC1D2Q9BYX2 928 aa24.58■■□□□ 1.53
CALM1-207ENST00000553964 ATAD2Q6PL18 1390 aa24.58■■□□□ 1.53
CALM1-207ENST00000553964 NCKAP5LQ9HCH0 1330 aa24.57■■□□□ 1.52
CALM1-207ENST00000553964 ZKSCAN2Q63HK3 967 aa24.57■■□□□ 1.52
CALM1-207ENST00000553964 HDGFL2Q7Z4V5 671 aaPredicted RBP24.57■■□□□ 1.52
CALM1-207ENST00000553964 DZIP1LQ8IYY4 767 aaKnown RBP24.57■■□□□ 1.52
CALM1-207ENST00000553964 SMC4Q9NTJ3 1288 aa24.57■■□□□ 1.52
CALM1-207ENST00000553964 ANTXR1Q9H6X2 564 aa24.56■■□□□ 1.52
CALM1-207ENST00000553964 COL3A1P02461 1466 aaPredicted RBP24.55■■□□□ 1.52
CALM1-207ENST00000553964 RIPK4P57078 832 aa24.55■■□□□ 1.52
CALM1-207ENST00000553964 ZRANB1Q9UGI0 708 aa24.54■■□□□ 1.52
CALM1-207ENST00000553964 AAMPQ13685 434 aa24.54■■□□□ 1.52
CALM1-207ENST00000553964 DIAPH1O60610 1272 aaKnown RBP24.53■■□□□ 1.52
CALM1-207ENST00000553964 ARHGEF40Q8TER5 1519 aa24.53■■□□□ 1.52
CALM1-207ENST00000553964 TRIM27P14373 513 aa24.52■■□□□ 1.52
CALM1-207ENST00000553964 ITPRIPQ8IWB1 547 aa24.52■■□□□ 1.52
CALM1-207ENST00000553964 PANK2Q9BZ23 570 aa24.52■■□□□ 1.52
CALM1-207ENST00000553964 CLTCQ00610 1675 aaKnown RBP24.52■■□□□ 1.52
CALM1-207ENST00000553964 MFAP1P55081 439 aaKnown RBP24.52■■□□□ 1.52
CALM1-207ENST00000553964 SSH1Q8WYL5 1049 aa24.52■■□□□ 1.52
CALM1-207ENST00000553964 HMOX1P09601 288 aa24.51■■□□□ 1.51
CALM1-207ENST00000553964 ADGRB2O60241 1585 aa24.51■■□□□ 1.51
CALM1-207ENST00000553964 TXNDC2Q86VQ3 553 aa24.51■■□□□ 1.51
CALM1-207ENST00000553964 DIP2BQ9P265 1576 aa24.51■■□□□ 1.51
CALM1-207ENST00000553964 A2ML1A8K2U0 1454 aa24.5■■□□□ 1.51
CALM1-207ENST00000553964 XRCC6P12956 609 aaKnown RBP eCLIP24.49■■□□□ 1.51
CALM1-207ENST00000553964 RIMBP3CA6NJZ7 1639 aa24.49■■□□□ 1.51
CALM1-207ENST00000553964 RIMBP3BA6NNM3 1639 aa24.49■■□□□ 1.51
CALM1-207ENST00000553964 RIMBP3Q9UFD9 1639 aa24.49■■□□□ 1.51
CALM1-207ENST00000553964 PKNOX2Q96KN3 472 aa24.49■■□□□ 1.51
CALM1-207ENST00000553964 RIMS2Q9UQ26 1411 aa24.49■■□□□ 1.51
CALM1-207ENST00000553964 THUMPD2Q9BTF0 503 aaKnown RBP24.48■■□□□ 1.51
CALM1-207ENST00000553964 POLKQ9UBT6 870 aa24.48■■□□□ 1.51
CALM1-207ENST00000553964 GZF1Q9H116 711 aaPredicted RBP24.48■■□□□ 1.51
CALM1-207ENST00000553964 EMILIN1Q9Y6C2 1016 aa24.48■■□□□ 1.51
CALM1-207ENST00000553964 NME9Q86XW9 330 aa24.47■■□□□ 1.51
CALM1-207ENST00000553964 NOB1Q9ULX3 412 aaKnown RBP24.47■■□□□ 1.51
CALM1-207ENST00000553964 PRKAR2BP31323 418 aa24.47■■□□□ 1.51
CALM1-207ENST00000553964 METP08581 1390 aa24.46■■□□□ 1.51
CALM1-207ENST00000553964 PHACTR3Q96KR7 559 aa24.46■■□□□ 1.51
CALM1-207ENST00000553964 C22orf23Q9BZE7 217 aa24.45■■□□□ 1.5
CALM1-207ENST00000553964 ATF7IPQ6VMQ6 1270 aa24.44■■□□□ 1.5
CALM1-207ENST00000553964 TMEM57Q8N5G2 664 aa24.44■■□□□ 1.5
CALM1-207ENST00000553964 NAP1L5Q96NT1 182 aaPredicted RBP24.43■■□□□ 1.5
CALM1-207ENST00000553964 DNAJC5Q9H3Z4 198 aa24.42■■□□□ 1.5
CALM1-207ENST00000553964 NUTM2FA1L443 756 aa24.41■■□□□ 1.5
CALM1-207ENST00000553964 DDX19BQ9UMR2 479 aa24.41■■□□□ 1.5
CALM1-207ENST00000553964 PNPLA6Q8IY17 1366 aa24.41■■□□□ 1.5
CALM1-207ENST00000553964 RRS1Q15050 365 aaKnown RBP24.41■■□□□ 1.5
CALM1-207ENST00000553964 ZMYM3Q14202 1370 aa24.41■■□□□ 1.5
CALM1-207ENST00000553964 ANKRD26Q9UPS8 1709 aa24.4■■□□□ 1.5
CALM1-207ENST00000553964 L1TD1Q5T7N2 865 aaKnown RBP24.4■■□□□ 1.5
CALM1-207ENST00000553964 VSIG10Q8N0Z9 540 aa24.39■■□□□ 1.5
CALM1-207ENST00000553964 WASLO00401 505 aaPredicted RBP24.39■■□□□ 1.49
CALM1-207ENST00000553964 HDAC1Q13547 482 aaPredicted RBP24.39■■□□□ 1.49
CALM1-207ENST00000553964 MED14O60244 1454 aa24.39■■□□□ 1.49
CALM1-207ENST00000553964 ELL2O00472 640 aaPredicted RBP24.38■■□□□ 1.49
CALM1-207ENST00000553964 LRRC7Q96NW7 1537 aa24.38■■□□□ 1.49
CALM1-207ENST00000553964 CT47B1P0C2W7 299 aaPredicted RBP24.38■■□□□ 1.49
CALM1-207ENST00000553964 PPIP5K1Q6PFW1 1433 aa24.38■■□□□ 1.49
CALM1-207ENST00000553964 ESF1Q9H501 851 aaKnown RBP24.38■■□□□ 1.49
CALM1-207ENST00000553964 KIF20BQ96Q89 1820 aa24.37■■□□□ 1.49
CALM1-207ENST00000553964 PLPPR3Q6T4P5 718 aa24.37■■□□□ 1.49
CALM1-207ENST00000553964 LNPKQ9C0E8 428 aa24.37■■□□□ 1.49
CALM1-207ENST00000553964 ZMYND15Q9H091 742 aa24.37■■□□□ 1.49
CALM1-207ENST00000553964 NCBP3Q53F19 620 aaKnown RBP24.36■■□□□ 1.49
CALM1-207ENST00000553964 FSD2A1L4K1 749 aa24.36■■□□□ 1.49
CALM1-207ENST00000553964 FCHSD2O94868 740 aa24.36■■□□□ 1.49
CALM1-207ENST00000553964 NUDT16Q96DE0 195 aaKnown RBP24.36■■□□□ 1.49
CALM1-207ENST00000553964 ZBTB40Q9NUA8 1239 aa24.36■■□□□ 1.49
CALM1-207ENST00000553964 SPATA31D1Q6ZQQ2 1576 aa24.35■■□□□ 1.49
CALM1-207ENST00000553964 SMC5Q8IY18 1101 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms