RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 CDCA8Q53HL2 280 aa16.33■□□□□ 0.2
PSMC6-204ENST00000553798 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.2
PSMC6-204ENST00000553798 ARHGEF10O15013 1369 aa16.33■□□□□ 0.2
PSMC6-204ENST00000553798 CPSF1Q10570 1443 aaKnown RBP16.33■□□□□ 0.2
PSMC6-204ENST00000553798 NINLQ9Y2I6 1382 aa16.32■□□□□ 0.2
PSMC6-204ENST00000553798 ALS2Q96Q42 1657 aa16.31■□□□□ 0.2
PSMC6-204ENST00000553798 LRP6O75581 1613 aa16.31■□□□□ 0.2
PSMC6-204ENST00000553798 USP6P35125 1406 aa16.31■□□□□ 0.2
PSMC6-204ENST00000553798 SSH2Q76I76 1423 aa16.31■□□□□ 0.2
PSMC6-204ENST00000553798 SLC12A5Q9H2X9 1139 aa16.3■□□□□ 0.2
PSMC6-204ENST00000553798 CD163L1Q9NR16 1453 aa16.29■□□□□ 0.2
PSMC6-204ENST00000553798 NUTM2BA6NNL0 878 aaPredicted RBP16.28■□□□□ 0.2
PSMC6-204ENST00000553798 NUTM2EB1AL46 878 aaPredicted RBP16.28■□□□□ 0.2
PSMC6-204ENST00000553798 PAK3O75914 559 aaPredicted RBP16.28■□□□□ 0.2
PSMC6-204ENST00000553798 NUTM2AQ8IVF1 878 aaPredicted RBP16.28■□□□□ 0.2
PSMC6-204ENST00000553798 AKAP12Q02952 1782 aa16.28■□□□□ 0.2
PSMC6-204ENST00000553798 TMC1Q8TDI8 760 aa16.27■□□□□ 0.2
PSMC6-204ENST00000553798 TERF2IPQ9NYB0 399 aa16.27■□□□□ 0.2
PSMC6-204ENST00000553798 LMOD2Q6P5Q4 547 aa16.26■□□□□ 0.19
PSMC6-204ENST00000553798 KTN1Q86UP2 1357 aaKnown RBP16.26■□□□□ 0.19
PSMC6-204ENST00000553798 HDGFL2Q7Z4V5 671 aaPredicted RBP16.25■□□□□ 0.19
PSMC6-204ENST00000553798 TTC21BQ7Z4L5 1316 aa16.24■□□□□ 0.19
PSMC6-204ENST00000553798 TTC21AQ8NDW8 1320 aa16.24■□□□□ 0.19
PSMC6-204ENST00000553798 NCBP3Q53F19 620 aaKnown RBP16.24■□□□□ 0.19
PSMC6-204ENST00000553798 ABTB2Q8N961 1025 aa16.24■□□□□ 0.19
PSMC6-204ENST00000553798 CABLES1Q8TDN4 633 aa16.24■□□□□ 0.19
PSMC6-204ENST00000553798 MON2Q7Z3U7 1717 aa16.24■□□□□ 0.19
PSMC6-204ENST00000553798 A0A1W2PP64 1363 aa16.24■□□□□ 0.19
PSMC6-204ENST00000553798 NRKQ7Z2Y5 1582 aa16.23■□□□□ 0.19
PSMC6-204ENST00000553798 ADAMTS2O95450 1211 aa16.23■□□□□ 0.19
PSMC6-204ENST00000553798 MEX3CQ5U5Q3 659 aaKnown RBP16.23■□□□□ 0.19
PSMC6-204ENST00000553798 RGS17Q9UGC6 210 aaPredicted RBP16.23■□□□□ 0.19
PSMC6-204ENST00000553798 ANKRD36BQ8N2N9 1353 aa16.23■□□□□ 0.19
PSMC6-204ENST00000553798 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
PSMC6-204ENST00000553798 C11orf95C9JLR9 678 aaPredicted RBP16.22■□□□□ 0.19
PSMC6-204ENST00000553798 NLRP13Q86W25 1043 aa16.22■□□□□ 0.19
PSMC6-204ENST00000553798 ABCA3Q99758 1704 aa16.22■□□□□ 0.19
PSMC6-204ENST00000553798 CRYBG1Q9Y4K1 1723 aa16.22■□□□□ 0.19
PSMC6-204ENST00000553798 USP19O94966 1318 aa16.21■□□□□ 0.19
PSMC6-204ENST00000553798 MARF1Q9Y4F3 1742 aaKnown RBP16.2■□□□□ 0.18
PSMC6-204ENST00000553798 FNBP4Q8N3X1 1017 aaPredicted RBP16.2■□□□□ 0.18
PSMC6-204ENST00000553798 PIK3C2AO00443 1686 aa16.19■□□□□ 0.18
PSMC6-204ENST00000553798 MYOM1P52179 1685 aa16.19■□□□□ 0.18
PSMC6-204ENST00000553798 ZEB1P37275 1124 aaPredicted RBP16.19■□□□□ 0.18
PSMC6-204ENST00000553798 HAP1P54257 671 aaPredicted RBP16.19■□□□□ 0.18
PSMC6-204ENST00000553798 NLRP6P59044 892 aa16.19■□□□□ 0.18
PSMC6-204ENST00000553798 NUTM2GQ5VZR2 741 aa16.19■□□□□ 0.18
PSMC6-204ENST00000553798 NGLY1Q96IV0 654 aa16.19■□□□□ 0.18
PSMC6-204ENST00000553798 C8orf37Q96NL8 207 aa16.19■□□□□ 0.18
PSMC6-204ENST00000553798 USP31Q70CQ4 1352 aa16.18■□□□□ 0.18
PSMC6-204ENST00000553798 ZNF772Q68DY9 489 aaPredicted RBP16.18■□□□□ 0.18
PSMC6-204ENST00000553798 AFF2P51816 1311 aa16.18■□□□□ 0.18
PSMC6-204ENST00000553798 GCP02774 474 aa16.17■□□□□ 0.18
PSMC6-204ENST00000553798 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.17■□□□□ 0.18
PSMC6-204ENST00000553798 PHRF1Q9P1Y6 1649 aaKnown RBP16.16■□□□□ 0.18
PSMC6-204ENST00000553798 FAM83GA6ND36 823 aa16.16■□□□□ 0.18
PSMC6-204ENST00000553798 CARD14Q9BXL6 1004 aa16.16■□□□□ 0.18
PSMC6-204ENST00000553798 KIF7Q2M1P5 1343 aa16.16■□□□□ 0.18
PSMC6-204ENST00000553798 CPDO75976 1380 aa16.15■□□□□ 0.18
PSMC6-204ENST00000553798 SLIT3O75094 1523 aa16.15■□□□□ 0.18
PSMC6-204ENST00000553798 SLIT2O94813 1529 aa16.15■□□□□ 0.18
PSMC6-204ENST00000553798 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
PSMC6-204ENST00000553798 NME9Q86XW9 330 aa16.15■□□□□ 0.18
PSMC6-204ENST00000553798 USP54Q70EL1 1684 aa16.14■□□□□ 0.18
PSMC6-204ENST00000553798 POTEAQ6S8J7 498 aa16.14■□□□□ 0.17
PSMC6-204ENST00000553798 BCL9LQ86UU0 1499 aa16.14■□□□□ 0.17
PSMC6-204ENST00000553798 KCNH5Q8NCM2 988 aa16.13■□□□□ 0.17
PSMC6-204ENST00000553798 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
PSMC6-204ENST00000553798 USP21Q9UK80 565 aa16.13■□□□□ 0.17
PSMC6-204ENST00000553798 KIAA0232Q92628 1395 aa16.13■□□□□ 0.17
PSMC6-204ENST00000553798 FYB1O15117 783 aa16.12■□□□□ 0.17
PSMC6-204ENST00000553798 POLR3GLQ9BT43 218 aa16.12■□□□□ 0.17
PSMC6-204ENST00000553798 PRDM11Q9NQV5 511 aa16.12■□□□□ 0.17
PSMC6-204ENST00000553798 OVOS2A0A0J9YW53 1432 aa16.11■□□□□ 0.17
PSMC6-204ENST00000553798 OVOS2Q6IE36 1432 aa16.11■□□□□ 0.17
PSMC6-204ENST00000553798 COL14A1Q05707 1796 aaKnown RBP16.11■□□□□ 0.17
PSMC6-204ENST00000553798 ZC3H6P61129 1189 aaKnown RBP16.11■□□□□ 0.17
PSMC6-204ENST00000553798 UNC5CLQ8IV45 518 aa16.11■□□□□ 0.17
PSMC6-204ENST00000553798 WASHC2AQ641Q2 1341 aa16.11■□□□□ 0.17
PSMC6-204ENST00000553798 CCDC7Q96M83 1385 aa16.11■□□□□ 0.17
PSMC6-204ENST00000553798 NWD2Q9ULI1 1742 aa16.11■□□□□ 0.17
PSMC6-204ENST00000553798 QTRT2Q9H974 415 aaKnown RBP16.1■□□□□ 0.17
PSMC6-204ENST00000553798 PANK3Q9H999 370 aa16.1■□□□□ 0.17
PSMC6-204ENST00000553798 ATRNO75882 1429 aa16.1■□□□□ 0.17
PSMC6-204ENST00000553798 NSD3Q9BZ95 1437 aa16.1■□□□□ 0.17
PSMC6-204ENST00000553798 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.09■□□□□ 0.17
PSMC6-204ENST00000553798 ARHGEF25Q86VW2 580 aa16.09■□□□□ 0.17
PSMC6-204ENST00000553798 TRPC5Q9UL62 973 aaPredicted RBP16.09■□□□□ 0.17
PSMC6-204ENST00000553798 NFAT5O94916 1531 aa16.09■□□□□ 0.17
PSMC6-204ENST00000553798 PLCH1Q4KWH8 1693 aa16.08■□□□□ 0.17
PSMC6-204ENST00000553798 COG3Q96JB2 828 aa16.08■□□□□ 0.16
PSMC6-204ENST00000553798 BTG4Q9NY30 223 aa16.08■□□□□ 0.16
PSMC6-204ENST00000553798 AATKQ6ZMQ8 1374 aa16.08■□□□□ 0.16
PSMC6-204ENST00000553798 CHRNA2Q15822 529 aa16.07■□□□□ 0.16
PSMC6-204ENST00000553798 ILDR2Q71H61 639 aa16.07■□□□□ 0.16
PSMC6-204ENST00000553798 CGNL1Q0VF96 1302 aa16.07■□□□□ 0.16
PSMC6-204ENST00000553798 LMO7Q8WWI1 1683 aa16.06■□□□□ 0.16
PSMC6-204ENST00000553798 RXRBP28702 533 aa16.06■□□□□ 0.16
PSMC6-204ENST00000553798 RBM6P78332 1123 aaKnown RBP16.06■□□□□ 0.16
PSMC6-204ENST00000553798 VPS72Q15906 364 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms