RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 COL22A1Q8NFW1 1626 aaPredicted RBP20.64■□□□□ 0.89
MTHFD1-204ENST00000553405 ZNF692Q9BU19 519 aaPredicted RBP20.63■□□□□ 0.89
MTHFD1-204ENST00000553405 CARD14Q9BXL6 1004 aa20.63■□□□□ 0.89
MTHFD1-204ENST00000553405 KTN1Q86UP2 1357 aaKnown RBP20.62■□□□□ 0.89
MTHFD1-204ENST00000553405 PNPLA6Q8IY17 1366 aa20.62■□□□□ 0.89
MTHFD1-204ENST00000553405 PIK3C2AO00443 1686 aa20.62■□□□□ 0.89
MTHFD1-204ENST00000553405 EDC4Q6P2E9 1401 aaKnown RBP20.61■□□□□ 0.89
MTHFD1-204ENST00000553405 MARF1Q9Y4F3 1742 aaKnown RBP20.61■□□□□ 0.89
MTHFD1-204ENST00000553405 CRYBG1Q9Y4K1 1723 aa20.61■□□□□ 0.89
MTHFD1-204ENST00000553405 TERF2IPQ9NYB0 399 aa20.61■□□□□ 0.89
MTHFD1-204ENST00000553405 MED1Q15648 1581 aaPredicted RBP20.6■□□□□ 0.89
MTHFD1-204ENST00000553405 TTC21BQ7Z4L5 1316 aa20.6■□□□□ 0.89
MTHFD1-204ENST00000553405 LRRC59Q96AG4 307 aaKnown RBP20.6■□□□□ 0.89
MTHFD1-204ENST00000553405 USP54Q70EL1 1684 aa20.6■□□□□ 0.89
MTHFD1-204ENST00000553405 HDGFL2Q7Z4V5 671 aaPredicted RBP20.59■□□□□ 0.89
MTHFD1-204ENST00000553405 POLR3GLQ9BT43 218 aa20.59■□□□□ 0.89
MTHFD1-204ENST00000553405 JCADQ9P266 1359 aa20.59■□□□□ 0.89
MTHFD1-204ENST00000553405 ABCA3Q99758 1704 aa20.57■□□□□ 0.88
MTHFD1-204ENST00000553405 PANK3Q9H999 370 aa20.57■□□□□ 0.88
MTHFD1-204ENST00000553405 ARHGEF10O15013 1369 aa20.56■□□□□ 0.88
MTHFD1-204ENST00000553405 TTC21AQ8NDW8 1320 aa20.55■□□□□ 0.88
MTHFD1-204ENST00000553405 NSD3Q9BZ95 1437 aa20.55■□□□□ 0.88
MTHFD1-204ENST00000553405 PER1O15534 1290 aaPredicted RBP20.54■□□□□ 0.88
MTHFD1-204ENST00000553405 USP31Q70CQ4 1352 aa20.54■□□□□ 0.88
MTHFD1-204ENST00000553405 USP19O94966 1318 aa20.53■□□□□ 0.88
MTHFD1-204ENST00000553405 LRP6O75581 1613 aa20.53■□□□□ 0.88
MTHFD1-204ENST00000553405 SLIT3O75094 1523 aa20.53■□□□□ 0.88
MTHFD1-204ENST00000553405 OVOS2A0A0J9YW53 1432 aa20.53■□□□□ 0.88
MTHFD1-204ENST00000553405 OVOS2Q6IE36 1432 aa20.53■□□□□ 0.88
MTHFD1-204ENST00000553405 ZNF316A6NFI3 1004 aaPredicted RBP20.52■□□□□ 0.88
MTHFD1-204ENST00000553405 PAK3O75914 559 aaPredicted RBP20.52■□□□□ 0.88
MTHFD1-204ENST00000553405 NME9Q86XW9 330 aa20.52■□□□□ 0.88
MTHFD1-204ENST00000553405 PHRF1Q9P1Y6 1649 aaKnown RBP20.52■□□□□ 0.88
MTHFD1-204ENST00000553405 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.51■□□□□ 0.87
MTHFD1-204ENST00000553405 ZRANB1Q9UGI0 708 aa20.51■□□□□ 0.87
MTHFD1-204ENST00000553405 KIF20BQ96Q89 1820 aa20.5■□□□□ 0.87
MTHFD1-204ENST00000553405 FYB1O15117 783 aa20.5■□□□□ 0.87
MTHFD1-204ENST00000553405 ABTB2Q8N961 1025 aa20.49■□□□□ 0.87
MTHFD1-204ENST00000553405 SPATA31A6Q5VVP1 1343 aa20.49■□□□□ 0.87
MTHFD1-204ENST00000553405 NUTM2GQ5VZR2 741 aa20.48■□□□□ 0.87
MTHFD1-204ENST00000553405 NFAT5O94916 1531 aa20.48■□□□□ 0.87
MTHFD1-204ENST00000553405 AMER1Q5JTC6 1135 aaPredicted RBP20.47■□□□□ 0.87
MTHFD1-204ENST00000553405 CABLES1Q8TDN4 633 aa20.47■□□□□ 0.87
MTHFD1-204ENST00000553405 ANKRD26Q9UPS8 1709 aa20.46■□□□□ 0.87
MTHFD1-204ENST00000553405 NLRP6P59044 892 aa20.45■□□□□ 0.86
MTHFD1-204ENST00000553405 LMOD2Q6P5Q4 547 aa20.45■□□□□ 0.86
MTHFD1-204ENST00000553405 NLRP13Q86W25 1043 aa20.44■□□□□ 0.86
MTHFD1-204ENST00000553405 CGNL1Q0VF96 1302 aa20.44■□□□□ 0.86
MTHFD1-204ENST00000553405 NPC1L1Q9UHC9 1359 aa20.44■□□□□ 0.86
MTHFD1-204ENST00000553405 GGNBP2Q9H3C7 697 aa20.42■□□□□ 0.86
MTHFD1-204ENST00000553405 NSD2O96028 1365 aa20.42■□□□□ 0.86
MTHFD1-204ENST00000553405 DDX10Q13206 875 aaKnown RBP20.41■□□□□ 0.86
MTHFD1-204ENST00000553405 GCP02774 474 aa20.4■□□□□ 0.86
MTHFD1-204ENST00000553405 KNSTRNQ9Y448 316 aa20.4■□□□□ 0.86
MTHFD1-204ENST00000553405 CPDO75976 1380 aa20.39■□□□□ 0.85
MTHFD1-204ENST00000553405 COL18A1P39060 1754 aa20.38■□□□□ 0.85
MTHFD1-204ENST00000553405 LMO7Q8WWI1 1683 aa20.38■□□□□ 0.85
MTHFD1-204ENST00000553405 NUTM2BA6NNL0 878 aaPredicted RBP20.37■□□□□ 0.85
MTHFD1-204ENST00000553405 NUTM2EB1AL46 878 aaPredicted RBP20.37■□□□□ 0.85
MTHFD1-204ENST00000553405 NUTM2AQ8IVF1 878 aaPredicted RBP20.37■□□□□ 0.85
MTHFD1-204ENST00000553405 COG3Q96JB2 828 aa20.37■□□□□ 0.85
MTHFD1-204ENST00000553405 KIAA0232Q92628 1395 aa20.36■□□□□ 0.85
MTHFD1-204ENST00000553405 PLEKHG5O94827 1062 aa20.35■□□□□ 0.85
MTHFD1-204ENST00000553405 FBLN1P23142 703 aa20.35■□□□□ 0.85
MTHFD1-204ENST00000553405 ARHGEF25Q86VW2 580 aa20.35■□□□□ 0.85
MTHFD1-204ENST00000553405 SLIT2O94813 1529 aa20.34■□□□□ 0.85
MTHFD1-204ENST00000553405 KCNH5Q8NCM2 988 aa20.34■□□□□ 0.85
MTHFD1-204ENST00000553405 LTN1O94822 1766 aa20.34■□□□□ 0.85
MTHFD1-204ENST00000553405 COL14A1Q05707 1796 aaKnown RBP20.34■□□□□ 0.85
MTHFD1-204ENST00000553405 PLCH1Q4KWH8 1693 aa20.33■□□□□ 0.85
MTHFD1-204ENST00000553405 FAM83GA6ND36 823 aa20.33■□□□□ 0.85
MTHFD1-204ENST00000553405 ADAMTS2O95450 1211 aa20.33■□□□□ 0.85
MTHFD1-204ENST00000553405 PEAK1Q9H792 1746 aa20.33■□□□□ 0.84
MTHFD1-204ENST00000553405 AATKQ6ZMQ8 1374 aa20.33■□□□□ 0.84
MTHFD1-204ENST00000553405 ABCC6O95255 1503 aa20.32■□□□□ 0.84
MTHFD1-204ENST00000553405 ZC3H6P61129 1189 aaKnown RBP20.32■□□□□ 0.84
MTHFD1-204ENST00000553405 NRAPQ86VF7 1730 aa20.31■□□□□ 0.84
MTHFD1-204ENST00000553405 SMG6Q86US8 1419 aaKnown RBP20.31■□□□□ 0.84
MTHFD1-204ENST00000553405 BCL9LQ86UU0 1499 aa20.3■□□□□ 0.84
MTHFD1-204ENST00000553405 NWD2Q9ULI1 1742 aa20.3■□□□□ 0.84
MTHFD1-204ENST00000553405 CAMTA1Q9Y6Y1 1673 aa20.3■□□□□ 0.84
MTHFD1-204ENST00000553405 CC2D1BQ5T0F9 858 aaKnown RBP20.3■□□□□ 0.84
MTHFD1-204ENST00000553405 FNBP4Q8N3X1 1017 aaPredicted RBP20.3■□□□□ 0.84
MTHFD1-204ENST00000553405 MAP3K19Q56UN5 1328 aa20.29■□□□□ 0.84
MTHFD1-204ENST00000553405 SOX12O15370 315 aa20.29■□□□□ 0.84
MTHFD1-204ENST00000553405 PARD3Q8TEW0 1356 aa20.29■□□□□ 0.84
MTHFD1-204ENST00000553405 CHRNA2Q15822 529 aa20.28■□□□□ 0.84
MTHFD1-204ENST00000553405 PRDM11Q9NQV5 511 aa20.28■□□□□ 0.84
MTHFD1-204ENST00000553405 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.27■□□□□ 0.84
MTHFD1-204ENST00000553405 MAP2P11137 1827 aaKnown RBP20.27■□□□□ 0.84
MTHFD1-204ENST00000553405 HAP1P54257 671 aaPredicted RBP20.27■□□□□ 0.84
MTHFD1-204ENST00000553405 RRS1Q15050 365 aaKnown RBP20.27■□□□□ 0.84
MTHFD1-204ENST00000553405 MORC1Q86VD1 984 aa20.27■□□□□ 0.84
MTHFD1-204ENST00000553405 C8orf37Q96NL8 207 aa20.27■□□□□ 0.84
MTHFD1-204ENST00000553405 AXIN2Q9Y2T1 843 aa20.27■□□□□ 0.84
MTHFD1-204ENST00000553405 RGPD5Q99666 1765 aa20.26■□□□□ 0.83
MTHFD1-204ENST00000553405 POLKQ9UBT6 870 aa20.26■□□□□ 0.83
MTHFD1-204ENST00000553405 RGS17Q9UGC6 210 aaPredicted RBP20.26■□□□□ 0.83
MTHFD1-204ENST00000553405 RTL1A6NKG5 1358 aa20.25■□□□□ 0.83
MTHFD1-204ENST00000553405 KIF24Q5T7B8 1368 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms