RNA–Protein interactions for RNA: ENST00000553355.1

ARID4A-211, Transcript of AT-rich interaction domain 4A, human

TSL 3

Gene ARID4A, Length 619 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID4A-211	ENST00000553355	TNNT2	P45379	298 aa	Predicted RBP	10.92	□□□□□ -0.66
ARID4A-211	ENST00000553355	CDK19	Q9BWU1	502 aa		10.92	□□□□□ -0.66
ARID4A-211	ENST00000553355	PNPLA6	Q8IY17	1366 aa		10.91	□□□□□ -0.66
ARID4A-211	ENST00000553355	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.91	□□□□□ -0.66
ARID4A-211	ENST00000553355	ESF1	Q9H501	851 aa	Known RBP	10.91	□□□□□ -0.66
ARID4A-211	ENST00000553355	EDC4	Q6P2E9	1401 aa	Known RBP	10.91	□□□□□ -0.66
ARID4A-211	ENST00000553355	ZMYM3	Q14202	1370 aa		10.9	□□□□□ -0.66
ARID4A-211	ENST00000553355	TNR	Q92752	1358 aa		10.9	□□□□□ -0.66
ARID4A-211	ENST00000553355	IL16	Q14005	1332 aa		10.9	□□□□□ -0.66
ARID4A-211	ENST00000553355	FYB1	O15117	783 aa		10.9	□□□□□ -0.66
ARID4A-211	ENST00000553355	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.9	□□□□□ -0.66
ARID4A-211	ENST00000553355	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
ARID4A-211	ENST00000553355	MON2	Q7Z3U7	1717 aa		10.89	□□□□□ -0.67
ARID4A-211	ENST00000553355	UBR1	Q8IWV7	1749 aa		10.89	□□□□□ -0.67
ARID4A-211	ENST00000553355	MAPK8IP3	Q9UPT6	1336 aa		10.89	□□□□□ -0.67
ARID4A-211	ENST00000553355	CANX	P27824	592 aa	Known RBP	10.89	□□□□□ -0.67
ARID4A-211	ENST00000553355	CPSF1	Q10570	1443 aa	Known RBP	10.89	□□□□□ -0.67
ARID4A-211	ENST00000553355	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.88	□□□□□ -0.67
ARID4A-211	ENST00000553355	BCAR3	O75815	825 aa		10.88	□□□□□ -0.67
ARID4A-211	ENST00000553355	RARS	P54136	660 aa	Known RBP	10.88	□□□□□ -0.67
ARID4A-211	ENST00000553355	GGNBP2	Q9H3C7	697 aa		10.88	□□□□□ -0.67
ARID4A-211	ENST00000553355	AKAP12	Q02952	1782 aa		10.88	□□□□□ -0.67
ARID4A-211	ENST00000553355	ITSN1	Q15811	1721 aa		10.87	□□□□□ -0.67
ARID4A-211	ENST00000553355	DIAPH1	O60610	1272 aa	Known RBP	10.87	□□□□□ -0.67
ARID4A-211	ENST00000553355	DDRGK1	Q96HY6	314 aa		10.87	□□□□□ -0.67
ARID4A-211	ENST00000553355	PLEKHF1	Q96S99	279 aa		10.87	□□□□□ -0.67
ARID4A-211	ENST00000553355	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.87	□□□□□ -0.67
ARID4A-211	ENST00000553355	AATK	Q6ZMQ8	1374 aa		10.87	□□□□□ -0.67
ARID4A-211	ENST00000553355	TMEM2	Q9UHN6	1383 aa		10.87	□□□□□ -0.67
ARID4A-211	ENST00000553355	PPIP5K1	Q6PFW1	1433 aa		10.86	□□□□□ -0.67
ARID4A-211	ENST00000553355	LRRC7	Q96NW7	1537 aa		10.86	□□□□□ -0.67
ARID4A-211	ENST00000553355	WASL	O00401	505 aa	Predicted RBP	10.86	□□□□□ -0.67
ARID4A-211	ENST00000553355	TMPO	P42166	694 aa	Known RBP	10.86	□□□□□ -0.67
ARID4A-211	ENST00000553355	CLUAP1	Q96AJ1	413 aa		10.86	□□□□□ -0.67
ARID4A-211	ENST00000553355	CABP1	Q9NZU7	370 aa		10.86	□□□□□ -0.67
ARID4A-211	ENST00000553355	RRP7A	Q9Y3A4	280 aa	Known RBP	10.86	□□□□□ -0.67
ARID4A-211	ENST00000553355	VIRMA	Q69YN4	1812 aa	Known RBP	10.86	□□□□□ -0.67
ARID4A-211	ENST00000553355	NEUROD2	Q15784	382 aa		10.85	□□□□□ -0.67
ARID4A-211	ENST00000553355	FAM161A	Q3B820	660 aa		10.85	□□□□□ -0.67
ARID4A-211	ENST00000553355	PMFBP1	Q8TBY8	1022 aa		10.85	□□□□□ -0.67
ARID4A-211	ENST00000553355	MET	P08581	1390 aa		10.85	□□□□□ -0.67
ARID4A-211	ENST00000553355	PLEKHG1	Q9ULL1	1385 aa		10.85	□□□□□ -0.67
ARID4A-211	ENST00000553355	C3	P01024	1663 aa		10.85	□□□□□ -0.67
ARID4A-211	ENST00000553355	TOPAZ1	Q8N9V7	1692 aa		10.85	□□□□□ -0.67
ARID4A-211	ENST00000553355	U2SURP	O15042	1029 aa	Known RBP	10.84	□□□□□ -0.67
ARID4A-211	ENST00000553355	FCHSD2	O94868	740 aa		10.84	□□□□□ -0.67
ARID4A-211	ENST00000553355	MLEC	Q14165	292 aa		10.84	□□□□□ -0.67
ARID4A-211	ENST00000553355	NRK	Q7Z2Y5	1582 aa		10.83	□□□□□ -0.68
ARID4A-211	ENST00000553355	NEFM	P07197	916 aa		10.83	□□□□□ -0.68
ARID4A-211	ENST00000553355	ADAMTS13	Q76LX8	1427 aa		10.83	□□□□□ -0.68
ARID4A-211	ENST00000553355	DIP2A	Q14689	1571 aa		10.82	□□□□□ -0.68
ARID4A-211	ENST00000553355	CALD1	Q05682	793 aa	Known RBP	10.82	□□□□□ -0.68
ARID4A-211	ENST00000553355	ZKSCAN2	Q63HK3	967 aa		10.82	□□□□□ -0.68
ARID4A-211	ENST00000553355	WAPL	Q7Z5K2	1190 aa		10.82	□□□□□ -0.68
ARID4A-211	ENST00000553355	ZNF428	Q96B54	188 aa		10.82	□□□□□ -0.68
ARID4A-211	ENST00000553355	TRIM35	Q9UPQ4	493 aa		10.82	□□□□□ -0.68
ARID4A-211	ENST00000553355	CCDC61	Q9Y6R9	512 aa		10.82	□□□□□ -0.68
ARID4A-211	ENST00000553355	SLIT1	O75093	1534 aa		10.81	□□□□□ -0.68
ARID4A-211	ENST00000553355	PANK1	Q8TE04	598 aa		10.81	□□□□□ -0.68
ARID4A-211	ENST00000553355	ZNF692	Q9BU19	519 aa	Predicted RBP	10.81	□□□□□ -0.68
ARID4A-211	ENST00000553355	COG6	Q9Y2V7	657 aa		10.81	□□□□□ -0.68
ARID4A-211	ENST00000553355	KIF16B	Q96L93	1317 aa		10.81	□□□□□ -0.68
ARID4A-211	ENST00000553355	ARHGAP23	Q9P227	1491 aa		10.81	□□□□□ -0.68
ARID4A-211	ENST00000553355	PAK3	O75914	559 aa	Predicted RBP	10.8	□□□□□ -0.68
ARID4A-211	ENST00000553355	C8orf34	Q49A92	452 aa		10.8	□□□□□ -0.68
ARID4A-211	ENST00000553355	FRAT1	Q92837	279 aa	Predicted RBP	10.8	□□□□□ -0.68
ARID4A-211	ENST00000553355	NUDT16	Q96DE0	195 aa	Known RBP	10.8	□□□□□ -0.68
ARID4A-211	ENST00000553355	RSPH6A	Q9H0K4	717 aa		10.8	□□□□□ -0.68
ARID4A-211	ENST00000553355	POLK	Q9UBT6	870 aa		10.8	□□□□□ -0.68
ARID4A-211	ENST00000553355	MAP2	P11137	1827 aa	Known RBP	10.79	□□□□□ -0.68
ARID4A-211	ENST00000553355	RIMS1	Q86UR5	1692 aa	Known RBP	10.79	□□□□□ -0.68
ARID4A-211	ENST00000553355	RIPK4	P57078	832 aa		10.79	□□□□□ -0.68
ARID4A-211	ENST00000553355	LMOD3	Q0VAK6	560 aa		10.79	□□□□□ -0.68
ARID4A-211	ENST00000553355	MVP	Q14764	893 aa	Known RBP	10.79	□□□□□ -0.68
ARID4A-211	ENST00000553355	NPM2	Q86SE8	214 aa	Known RBP	10.79	□□□□□ -0.68
ARID4A-211	ENST00000553355	NALCN	Q8IZF0	1738 aa		10.78	□□□□□ -0.68
ARID4A-211	ENST00000553355	PTCH1	Q13635	1447 aa		10.78	□□□□□ -0.68
ARID4A-211	ENST00000553355	IGHD	P01880	384 aa		10.78	□□□□□ -0.68
ARID4A-211	ENST00000553355	EXOSC9	Q06265	439 aa	Known RBP	10.78	□□□□□ -0.68
ARID4A-211	ENST00000553355	NFE2L2	Q16236	605 aa		10.78	□□□□□ -0.68
ARID4A-211	ENST00000553355	ALDH1L2	Q3SY69	923 aa		10.78	□□□□□ -0.68
ARID4A-211	ENST00000553355	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
ARID4A-211	ENST00000553355	FTSJ3	Q8IY81	847 aa	Known RBP	10.78	□□□□□ -0.68
ARID4A-211	ENST00000553355	DZIP1L	Q8IYY4	767 aa	Known RBP	10.78	□□□□□ -0.68
ARID4A-211	ENST00000553355	COG3	Q96JB2	828 aa		10.78	□□□□□ -0.68
ARID4A-211	ENST00000553355	RWDD1	Q9H446	243 aa	Predicted RBP	10.78	□□□□□ -0.68
ARID4A-211	ENST00000553355	ROBO2	Q9HCK4	1378 aa		10.77	□□□□□ -0.68
ARID4A-211	ENST00000553355	IPO8	O15397	1037 aa	Known RBP	10.77	□□□□□ -0.69
ARID4A-211	ENST00000553355	PRKAR2B	P31323	418 aa		10.77	□□□□□ -0.69
ARID4A-211	ENST00000553355	DSG3	P32926	999 aa		10.77	□□□□□ -0.69
ARID4A-211	ENST00000553355	BRPF1	P55201	1214 aa	Predicted RBP	10.77	□□□□□ -0.69
ARID4A-211	ENST00000553355	TXNDC2	Q86VQ3	553 aa		10.77	□□□□□ -0.69
ARID4A-211	ENST00000553355	SMC4	Q9NTJ3	1288 aa		10.77	□□□□□ -0.69
ARID4A-211	ENST00000553355	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.77	□□□□□ -0.69
ARID4A-211	ENST00000553355	FER1L4	A9Z1Z3	1794 aa		10.77	□□□□□ -0.69
ARID4A-211	ENST00000553355	OVOS2	A0A0J9YW53	1432 aa		10.76	□□□□□ -0.69
ARID4A-211	ENST00000553355	OVOS2	Q6IE36	1432 aa		10.76	□□□□□ -0.69
ARID4A-211	ENST00000553355	RLBP1	P12271	317 aa		10.76	□□□□□ -0.69
ARID4A-211	ENST00000553355	IL13	P35225	146 aa		10.76	□□□□□ -0.69
ARID4A-211	ENST00000553355	RGS3	P49796	1198 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms