RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 PARD3Q8TEW0 1356 aa6.66□□□□□ -1.34
PFDN5-219ENST00000553171 SAMD9Q5K651 1589 aa6.65□□□□□ -1.34
PFDN5-219ENST00000553171 TET3O43151 1660 aa6.65□□□□□ -1.34
PFDN5-219ENST00000553171 HNRNPMP52272 730 aaKnown RBP eCLIP6.65□□□□□ -1.34
PFDN5-219ENST00000553171 UNC5CLQ8IV45 518 aa6.65□□□□□ -1.34
PFDN5-219ENST00000553171 FHDC1Q9C0D6 1143 aaPredicted RBP6.65□□□□□ -1.34
PFDN5-219ENST00000553171 ASXL1Q8IXJ9 1541 aa6.65□□□□□ -1.35
PFDN5-219ENST00000553171 SAMD9LQ8IVG5 1584 aa6.65□□□□□ -1.35
PFDN5-219ENST00000553171 PTGER2P43116 358 aa6.64□□□□□ -1.35
PFDN5-219ENST00000553171 TMED8Q6PL24 325 aaPredicted RBP6.64□□□□□ -1.35
PFDN5-219ENST00000553171 ZNF692Q9BU19 519 aaPredicted RBP6.64□□□□□ -1.35
PFDN5-219ENST00000553171 GPBP1L1Q9HC44 474 aaPredicted RBP6.64□□□□□ -1.35
PFDN5-219ENST00000553171 CWC22Q9HCG8 908 aaKnown RBP6.64□□□□□ -1.35
PFDN5-219ENST00000553171 RGPD1P0DJD0 1748 aa6.63□□□□□ -1.35
PFDN5-219ENST00000553171 RGS19P49795 217 aa6.63□□□□□ -1.35
PFDN5-219ENST00000553171 MLLT1Q03111 559 aaPredicted RBP6.63□□□□□ -1.35
PFDN5-219ENST00000553171 UBR1Q8IWV7 1749 aa6.63□□□□□ -1.35
PFDN5-219ENST00000553171 PRDM10Q9NQV6 1147 aa6.63□□□□□ -1.35
PFDN5-219ENST00000553171 WASHC2CQ9Y4E1 1318 aa6.63□□□□□ -1.35
PFDN5-219ENST00000553171 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.62□□□□□ -1.35
PFDN5-219ENST00000553171 NRKQ7Z2Y5 1582 aa6.62□□□□□ -1.35
PFDN5-219ENST00000553171 ATP10DQ9P241 1426 aa6.62□□□□□ -1.35
PFDN5-219ENST00000553171 MAFGO15525 162 aa6.62□□□□□ -1.35
PFDN5-219ENST00000553171 RAD21O60216 631 aa6.62□□□□□ -1.35
PFDN5-219ENST00000553171 PPP1R15AO75807 674 aaPredicted RBP6.62□□□□□ -1.35
PFDN5-219ENST00000553171 GPR162Q16538 588 aa6.62□□□□□ -1.35
PFDN5-219ENST00000553171 RTL5Q5HYW3 569 aaPredicted RBP6.62□□□□□ -1.35
PFDN5-219ENST00000553171 LCE2DQ5TA82 110 aaPredicted RBP6.62□□□□□ -1.35
PFDN5-219ENST00000553171 DDX17Q92841 729 aaKnown RBP6.62□□□□□ -1.35
PFDN5-219ENST00000553171 SECISBP2LQ93073 1101 aaKnown RBP6.62□□□□□ -1.35
PFDN5-219ENST00000553171 PCNTO95613 3336 aa6.61□□□□□ -1.35
PFDN5-219ENST00000553171 TMEM2Q9UHN6 1383 aa6.61□□□□□ -1.35
PFDN5-219ENST00000553171 CLCN6P51797 869 aa6.61□□□□□ -1.35
PFDN5-219ENST00000553171 FAM177A1Q8N128 213 aaPredicted RBP6.61□□□□□ -1.35
PFDN5-219ENST00000553171 KCTD17Q8N5Z5 321 aa6.61□□□□□ -1.35
PFDN5-219ENST00000553171 PRDM16Q9HAZ2 1276 aa6.61□□□□□ -1.35
PFDN5-219ENST00000553171 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.61□□□□□ -1.35
PFDN5-219ENST00000553171 ANAPC15P60006 121 aa6.6□□□□□ -1.35
PFDN5-219ENST00000553171 PPARGC1BQ86YN6 1023 aaKnown RBP6.6□□□□□ -1.35
PFDN5-219ENST00000553171 WWC1Q8IX03 1113 aa6.6□□□□□ -1.35
PFDN5-219ENST00000553171 DNAJC2Q99543 621 aaKnown RBP6.6□□□□□ -1.35
PFDN5-219ENST00000553171 SSUH2Q9Y2M2 353 aa6.6□□□□□ -1.35
PFDN5-219ENST00000553171 DLC1Q96QB1 1528 aa6.6□□□□□ -1.35
PFDN5-219ENST00000553171 GPATCH8Q9UKJ3 1502 aaKnown RBP6.6□□□□□ -1.35
PFDN5-219ENST00000553171 CDC42BPBQ9Y5S2 1711 aa6.59□□□□□ -1.35
PFDN5-219ENST00000553171 MAP3K5Q99683 1374 aa6.59□□□□□ -1.35
PFDN5-219ENST00000553171 PDE4DIPQ5VU43 2346 aa6.59□□□□□ -1.35
PFDN5-219ENST00000553171 KIF3CO14782 793 aa6.59□□□□□ -1.35
PFDN5-219ENST00000553171 RGS22Q8NE09 1264 aa6.59□□□□□ -1.35
PFDN5-219ENST00000553171 SLIT2O94813 1529 aa6.59□□□□□ -1.35
PFDN5-219ENST00000553171 SOS2Q07890 1332 aaPredicted RBP6.58□□□□□ -1.36
PFDN5-219ENST00000553171 VGFO15240 615 aaPredicted RBP6.58□□□□□ -1.36
PFDN5-219ENST00000553171 PPM1GO15355 546 aaPredicted RBP6.58□□□□□ -1.36
PFDN5-219ENST00000553171 HSPA1AP0DMV8 641 aaKnown RBP6.58□□□□□ -1.36
PFDN5-219ENST00000553171 HSPA1BP0DMV9 641 aaKnown RBP6.58□□□□□ -1.36
PFDN5-219ENST00000553171 CNGB1Q14028 1251 aaPredicted RBP6.58□□□□□ -1.36
PFDN5-219ENST00000553171 VPS72Q15906 364 aa6.58□□□□□ -1.36
PFDN5-219ENST00000553171 CCDC27Q2M243 656 aa6.58□□□□□ -1.36
PFDN5-219ENST00000553171 GPATCH11Q8N954 259 aa6.58□□□□□ -1.36
PFDN5-219ENST00000553171 USP35Q9P2H5 1018 aa6.58□□□□□ -1.36
PFDN5-219ENST00000553171 TNS1Q9HBL0 1735 aaKnown RBP6.58□□□□□ -1.36
PFDN5-219ENST00000553171 MYOM2P54296 1465 aa6.58□□□□□ -1.36
PFDN5-219ENST00000553171 MYOM1P52179 1685 aa6.58□□□□□ -1.36
PFDN5-219ENST00000553171 DCCP43146 1447 aa6.58□□□□□ -1.36
PFDN5-219ENST00000553171 DHX29Q7Z478 1369 aaKnown RBP6.57□□□□□ -1.36
PFDN5-219ENST00000553171 KIF3BO15066 747 aa6.57□□□□□ -1.36
PFDN5-219ENST00000553171 APBA3O96018 575 aa6.57□□□□□ -1.36
PFDN5-219ENST00000553171 RBM25P49756 843 aaKnown RBP6.57□□□□□ -1.36
PFDN5-219ENST00000553171 ZNF526Q8TF50 670 aaPredicted RBP6.57□□□□□ -1.36
PFDN5-219ENST00000553171 BBXQ8WY36 941 aaPredicted RBP6.57□□□□□ -1.36
PFDN5-219ENST00000553171 SGIP1Q9BQI5 828 aa6.57□□□□□ -1.36
PFDN5-219ENST00000553171 ERVK-7P63135 1459 aa6.57□□□□□ -1.36
PFDN5-219ENST00000553171 RREB1Q92766 1687 aa6.57□□□□□ -1.36
PFDN5-219ENST00000553171 MST1RQ04912 1400 aa6.57□□□□□ -1.36
PFDN5-219ENST00000553171 FMN1Q68DA7 1419 aa6.57□□□□□ -1.36
PFDN5-219ENST00000553171 CHD2O14647 1828 aaKnown RBP6.57□□□□□ -1.36
PFDN5-219ENST00000553171 KIAA1210Q9ULL0 1709 aa6.56□□□□□ -1.36
PFDN5-219ENST00000553171 CLGNO14967 610 aa6.56□□□□□ -1.36
PFDN5-219ENST00000553171 CANXP27824 592 aaKnown RBP6.56□□□□□ -1.36
PFDN5-219ENST00000553171 TSHZ2Q9NRE2 1034 aa6.56□□□□□ -1.36
PFDN5-219ENST00000553171 FARP1Q9Y4F1 1045 aaPredicted RBP6.56□□□□□ -1.36
PFDN5-219ENST00000553171 INO80Q9ULG1 1556 aaPredicted RBP6.56□□□□□ -1.36
PFDN5-219ENST00000553171 NUP188Q5SRE5 1749 aa6.56□□□□□ -1.36
PFDN5-219ENST00000553171 USP19O94966 1318 aa6.55□□□□□ -1.36
PFDN5-219ENST00000553171 COL22A1Q8NFW1 1626 aaPredicted RBP6.55□□□□□ -1.36
PFDN5-219ENST00000553171 GALR2O43603 387 aaPredicted RBP6.55□□□□□ -1.36
PFDN5-219ENST00000553171 PHF14O94880 888 aa6.55□□□□□ -1.36
PFDN5-219ENST00000553171 TRIM37O94972 964 aa6.55□□□□□ -1.36
PFDN5-219ENST00000553171 ZBTB7AO95365 584 aa6.55□□□□□ -1.36
PFDN5-219ENST00000553171 PRR29P0C7W0 189 aa6.55□□□□□ -1.36
PFDN5-219ENST00000553171 FAM182BQ5T319 152 aa6.55□□□□□ -1.36
PFDN5-219ENST00000553171 ZNF579Q8NAF0 562 aaKnown RBP6.55□□□□□ -1.36
PFDN5-219ENST00000553171 CHMP4BQ9H444 224 aaKnown RBP6.55□□□□□ -1.36
PFDN5-219ENST00000553171 WDR90Q96KV7 1748 aa6.54□□□□□ -1.36
PFDN5-219ENST00000553171 ADGRB2O60241 1585 aa6.54□□□□□ -1.36
PFDN5-219ENST00000553171 TROQ12816 1431 aaPredicted RBP6.54□□□□□ -1.36
PFDN5-219ENST00000553171 GRIN3BO60391 1043 aa6.54□□□□□ -1.36
PFDN5-219ENST00000553171 FAM193AP78312 1265 aa6.54□□□□□ -1.36
PFDN5-219ENST00000553171 HTRA3P83110 453 aa6.54□□□□□ -1.36
PFDN5-219ENST00000553171 ZNF622Q969S3 477 aaKnown RBP eCLIP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms