RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 MON2Q7Z3U7 1717 aa11.92□□□□□ -0.5
RAB3IP-218ENST00000553099 SLFN5Q08AF3 891 aa11.92□□□□□ -0.5
RAB3IP-218ENST00000553099 NME9Q86XW9 330 aa11.92□□□□□ -0.5
RAB3IP-218ENST00000553099 CPSF1Q10570 1443 aaKnown RBP11.92□□□□□ -0.5
RAB3IP-218ENST00000553099 EDC4Q6P2E9 1401 aaKnown RBP11.92□□□□□ -0.5
RAB3IP-218ENST00000553099 AKAP12Q02952 1782 aa11.92□□□□□ -0.5
RAB3IP-218ENST00000553099 DMRT2Q9Y5R5 561 aa11.92□□□□□ -0.5
RAB3IP-218ENST00000553099 TBX22Q9Y458 520 aa11.91□□□□□ -0.5
RAB3IP-218ENST00000553099 ADGRB2O60241 1585 aa11.91□□□□□ -0.5
RAB3IP-218ENST00000553099 WWC1Q8IX03 1113 aa11.91□□□□□ -0.5
RAB3IP-218ENST00000553099 EXOC6Q8TAG9 804 aa11.91□□□□□ -0.5
RAB3IP-218ENST00000553099 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
RAB3IP-218ENST00000553099 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
RAB3IP-218ENST00000553099 E9PSI1 815 aa11.9□□□□□ -0.5
RAB3IP-218ENST00000553099 NGEFQ8N5V2 710 aa11.9□□□□□ -0.5
RAB3IP-218ENST00000553099 IQSEC2Q5JU85 1478 aa11.9□□□□□ -0.5
RAB3IP-218ENST00000553099 DIP2AQ14689 1571 aa11.9□□□□□ -0.51
RAB3IP-218ENST00000553099 COL3A1P02461 1466 aaPredicted RBP11.89□□□□□ -0.51
RAB3IP-218ENST00000553099 DIAPH1O60610 1272 aaKnown RBP11.89□□□□□ -0.51
RAB3IP-218ENST00000553099 NKTRP30414 1462 aaKnown RBP11.89□□□□□ -0.51
RAB3IP-218ENST00000553099 COG3Q96JB2 828 aa11.89□□□□□ -0.51
RAB3IP-218ENST00000553099 RGPD8O14715 1765 aaPredicted RBP11.89□□□□□ -0.51
RAB3IP-218ENST00000553099 ADAMTSL3P82987 1691 aa11.89□□□□□ -0.51
RAB3IP-218ENST00000553099 TOPAZ1Q8N9V7 1692 aa11.88□□□□□ -0.51
RAB3IP-218ENST00000553099 SETD1BQ9UPS6 1966 aaKnown RBP11.88□□□□□ -0.51
RAB3IP-218ENST00000553099 MAPK8IP3Q9UPT6 1336 aa11.88□□□□□ -0.51
RAB3IP-218ENST00000553099 PTCH1Q13635 1447 aa11.88□□□□□ -0.51
RAB3IP-218ENST00000553099 ACEP12821 1306 aa11.87□□□□□ -0.51
RAB3IP-218ENST00000553099 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
RAB3IP-218ENST00000553099 POLKQ9UBT6 870 aa11.87□□□□□ -0.51
RAB3IP-218ENST00000553099 EMILIN1Q9Y6C2 1016 aa11.87□□□□□ -0.51
RAB3IP-218ENST00000553099 KCNA6P17658 529 aa11.87□□□□□ -0.51
RAB3IP-218ENST00000553099 PMFBP1Q8TBY8 1022 aa11.87□□□□□ -0.51
RAB3IP-218ENST00000553099 XRN1Q8IZH2 1706 aaKnown RBP11.87□□□□□ -0.51
RAB3IP-218ENST00000553099 ZNF142P52746 1687 aaPredicted RBP11.86□□□□□ -0.51
RAB3IP-218ENST00000553099 ANKLE2Q86XL3 938 aa11.86□□□□□ -0.51
RAB3IP-218ENST00000553099 TRMT2AQ8IZ69 625 aaKnown RBP11.86□□□□□ -0.51
RAB3IP-218ENST00000553099 RRS1Q15050 365 aaKnown RBP11.86□□□□□ -0.51
RAB3IP-218ENST00000553099 C20orf194Q5TEA3 1177 aa11.85□□□□□ -0.51
RAB3IP-218ENST00000553099 CRBNQ96SW2 442 aa11.85□□□□□ -0.51
RAB3IP-218ENST00000553099 NRKQ7Z2Y5 1582 aa11.85□□□□□ -0.51
RAB3IP-218ENST00000553099 PNPLA6Q8IY17 1366 aa11.84□□□□□ -0.51
RAB3IP-218ENST00000553099 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.84□□□□□ -0.51
RAB3IP-218ENST00000553099 SOX12O15370 315 aa11.84□□□□□ -0.51
RAB3IP-218ENST00000553099 TTC21BQ7Z4L5 1316 aa11.84□□□□□ -0.51
RAB3IP-218ENST00000553099 BCAR3O75815 825 aa11.83□□□□□ -0.51
RAB3IP-218ENST00000553099 NGDNQ8NEJ9 315 aaKnown RBP11.83□□□□□ -0.51
RAB3IP-218ENST00000553099 PLEKHF1Q96S99 279 aa11.83□□□□□ -0.51
RAB3IP-218ENST00000553099 USP6P35125 1406 aa11.83□□□□□ -0.51
RAB3IP-218ENST00000553099 LRRC7Q96NW7 1537 aa11.83□□□□□ -0.52
RAB3IP-218ENST00000553099 HMOX1P09601 288 aa11.83□□□□□ -0.52
RAB3IP-218ENST00000553099 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
RAB3IP-218ENST00000553099 PLEKHG3A1L390 1219 aa11.83□□□□□ -0.52
RAB3IP-218ENST00000553099 NEFMP07197 916 aa11.83□□□□□ -0.52
RAB3IP-218ENST00000553099 TMPOP42166 694 aaKnown RBP11.83□□□□□ -0.52
RAB3IP-218ENST00000553099 CCDC27Q2M243 656 aa11.83□□□□□ -0.52
RAB3IP-218ENST00000553099 WDR63Q8IWG1 891 aa11.83□□□□□ -0.52
RAB3IP-218ENST00000553099 CHD2O14647 1828 aaKnown RBP11.82□□□□□ -0.52
RAB3IP-218ENST00000553099 CDK12Q9NYV4 1490 aaPredicted RBP11.82□□□□□ -0.52
RAB3IP-218ENST00000553099 PRKAR2BP31323 418 aa11.82□□□□□ -0.52
RAB3IP-218ENST00000553099 PNNQ9H307 717 aaKnown RBP11.82□□□□□ -0.52
RAB3IP-218ENST00000553099 PIK3R4Q99570 1358 aa11.81□□□□□ -0.52
RAB3IP-218ENST00000553099 CANXP27824 592 aaKnown RBP11.81□□□□□ -0.52
RAB3IP-218ENST00000553099 RIPK4P57078 832 aa11.81□□□□□ -0.52
RAB3IP-218ENST00000553099 AATKQ6ZMQ8 1374 aa11.81□□□□□ -0.52
RAB3IP-218ENST00000553099 FCHSD2O94868 740 aa11.8□□□□□ -0.52
RAB3IP-218ENST00000553099 MYH16Q9H6N6 1097 aa11.8□□□□□ -0.52
RAB3IP-218ENST00000553099 RBM19Q9Y4C8 960 aaKnown RBP11.8□□□□□ -0.52
RAB3IP-218ENST00000553099 NALCNQ8IZF0 1738 aa11.8□□□□□ -0.52
RAB3IP-218ENST00000553099 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
RAB3IP-218ENST00000553099 RSPH6AQ9H0K4 717 aa11.79□□□□□ -0.52
RAB3IP-218ENST00000553099 FMN2Q9NZ56 1722 aa11.79□□□□□ -0.52
RAB3IP-218ENST00000553099 OVOS2A0A0J9YW53 1432 aa11.79□□□□□ -0.52
RAB3IP-218ENST00000553099 OVOS2Q6IE36 1432 aa11.79□□□□□ -0.52
RAB3IP-218ENST00000553099 FRAT1Q92837 279 aaPredicted RBP11.79□□□□□ -0.52
RAB3IP-218ENST00000553099 BCL2L13Q9BXK5 485 aa11.79□□□□□ -0.52
RAB3IP-218ENST00000553099 TRIM35Q9UPQ4 493 aa11.79□□□□□ -0.52
RAB3IP-218ENST00000553099 IL13P35225 146 aa11.78□□□□□ -0.52
RAB3IP-218ENST00000553099 C14orf37Q86TY3 774 aa11.78□□□□□ -0.52
RAB3IP-218ENST00000553099 NPHP4O75161 1426 aaPredicted RBP11.77□□□□□ -0.53
RAB3IP-218ENST00000553099 FANCIQ9NVI1 1328 aa11.77□□□□□ -0.53
RAB3IP-218ENST00000553099 PHACTR3Q96KR7 559 aa11.77□□□□□ -0.53
RAB3IP-218ENST00000553099 TTC21AQ8NDW8 1320 aa11.76□□□□□ -0.53
RAB3IP-218ENST00000553099 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
RAB3IP-218ENST00000553099 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
RAB3IP-218ENST00000553099 NUTM2GQ5VZR2 741 aa11.76□□□□□ -0.53
RAB3IP-218ENST00000553099 ANKARQ7Z5J8 1434 aa11.76□□□□□ -0.53
RAB3IP-218ENST00000553099 DLG5Q8TDM6 1919 aa11.76□□□□□ -0.53
RAB3IP-218ENST00000553099 RARSP54136 660 aaKnown RBP11.75□□□□□ -0.53
RAB3IP-218ENST00000553099 LAS1LQ9Y4W2 734 aaKnown RBP11.75□□□□□ -0.53
RAB3IP-218ENST00000553099 SSH2Q76I76 1423 aa11.75□□□□□ -0.53
RAB3IP-218ENST00000553099 PIK3C2AO00443 1686 aa11.75□□□□□ -0.53
RAB3IP-218ENST00000553099 PEAK1Q9H792 1746 aa11.75□□□□□ -0.53
RAB3IP-218ENST00000553099 NLRP6P59044 892 aa11.74□□□□□ -0.53
RAB3IP-218ENST00000553099 EXOSC9Q06265 439 aaKnown RBP11.74□□□□□ -0.53
RAB3IP-218ENST00000553099 EIF4A2Q14240 407 aaKnown RBP11.74□□□□□ -0.53
RAB3IP-218ENST00000553099 HSP90AB2PQ58FF8 381 aa11.74□□□□□ -0.53
RAB3IP-218ENST00000553099 NFE2L2Q16236 605 aa11.74□□□□□ -0.53
RAB3IP-218ENST00000553099 PANK1Q8TE04 598 aa11.73□□□□□ -0.53
RAB3IP-218ENST00000553099 THUMPD2Q9BTF0 503 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms