RNA–Protein interactions for RNA: ENST00000552346.1

USP15-218, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-218ENST00000552346 TLL2Q9Y6L7 1015 aa11.28□□□□□ -0.6
USP15-218ENST00000552346 SPTLC1O15269 473 aa11.27□□□□□ -0.61
USP15-218ENST00000552346 BMP1P13497 986 aa11.27□□□□□ -0.61
USP15-218ENST00000552346 VARSP26640 1264 aaKnown RBP11.27□□□□□ -0.61
USP15-218ENST00000552346 LYPD8Q6UX82 237 aa11.27□□□□□ -0.61
USP15-218ENST00000552346 CFAP99D6REC4 459 aa11.26□□□□□ -0.61
USP15-218ENST00000552346 TRIM46Q7Z4K8 759 aa11.26□□□□□ -0.61
USP15-218ENST00000552346 ZBTB3Q9H5J0 574 aa11.26□□□□□ -0.61
USP15-218ENST00000552346 PLEKHG3A1L390 1219 aa11.25□□□□□ -0.61
USP15-218ENST00000552346 HRCP23327 699 aa11.25□□□□□ -0.61
USP15-218ENST00000552346 WIPF1O43516 503 aa11.24□□□□□ -0.61
USP15-218ENST00000552346 RIC3Q7Z5B4 369 aa11.24□□□□□ -0.61
USP15-218ENST00000552346 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
USP15-218ENST00000552346 LCE2CQ5TA81 110 aa11.22□□□□□ -0.61
USP15-218ENST00000552346 PRPF38BQ5VTL8 546 aaKnown RBP11.22□□□□□ -0.61
USP15-218ENST00000552346 MPNDQ8N594 471 aa11.22□□□□□ -0.61
USP15-218ENST00000552346 CABLES1Q8TDN4 633 aa11.22□□□□□ -0.61
USP15-218ENST00000552346 INSM1Q01101 510 aaPredicted RBP11.21□□□□□ -0.61
USP15-218ENST00000552346 NNTQ13423 1086 aa11.21□□□□□ -0.61
USP15-218ENST00000552346 MAP10Q9P2G4 905 aa11.21□□□□□ -0.61
USP15-218ENST00000552346 FAM174AQ8TBP5 190 aa11.2□□□□□ -0.62
USP15-218ENST00000552346 F12P00748 615 aaPredicted RBP11.19□□□□□ -0.62
USP15-218ENST00000552346 PDE4DQ08499 809 aa11.18□□□□□ -0.62
USP15-218ENST00000552346 SLC16A10Q8TF71 515 aa11.18□□□□□ -0.62
USP15-218ENST00000552346 FOXJ1Q92949 421 aa11.18□□□□□ -0.62
USP15-218ENST00000552346 NXF1Q9UBU9 619 aaKnown RBP11.18□□□□□ -0.62
USP15-218ENST00000552346 TSC1Q92574 1164 aa11.17□□□□□ -0.62
USP15-218ENST00000552346 ZFP42Q96MM3 310 aa11.17□□□□□ -0.62
USP15-218ENST00000552346 STK17AQ9UEE5 414 aa11.17□□□□□ -0.62
USP15-218ENST00000552346 LIMD1Q9UGP4 676 aa11.17□□□□□ -0.62
USP15-218ENST00000552346 NUTM2BA6NNL0 878 aaPredicted RBP11.16□□□□□ -0.62
USP15-218ENST00000552346 NUTM2EB1AL46 878 aaPredicted RBP11.16□□□□□ -0.62
USP15-218ENST00000552346 ADH1CP00326 375 aa11.16□□□□□ -0.62
USP15-218ENST00000552346 WDR4P57081 412 aaKnown RBP11.16□□□□□ -0.62
USP15-218ENST00000552346 NUTM2DQ5VT03 806 aaPredicted RBP11.16□□□□□ -0.62
USP15-218ENST00000552346 MYSM1Q5VVJ2 828 aa11.16□□□□□ -0.62
USP15-218ENST00000552346 NUTM2AQ8IVF1 878 aaPredicted RBP11.16□□□□□ -0.62
USP15-218ENST00000552346 PER1O15534 1290 aaPredicted RBP11.15□□□□□ -0.62
USP15-218ENST00000552346 TIMP2P16035 220 aa11.15□□□□□ -0.62
USP15-218ENST00000552346 ARID5BQ14865 1188 aa11.15□□□□□ -0.62
USP15-218ENST00000552346 AGERQ15109 404 aa11.15□□□□□ -0.62
USP15-218ENST00000552346 QPCTQ16769 361 aa11.15□□□□□ -0.62
USP15-218ENST00000552346 MRPL14Q6P1L8 145 aaKnown RBP11.14□□□□□ -0.63
USP15-218ENST00000552346 CDK15Q96Q40 435 aa11.14□□□□□ -0.63
USP15-218ENST00000552346 SCARF1Q14162 830 aa11.13□□□□□ -0.63
USP15-218ENST00000552346 TUSC1Q2TAM9 212 aa11.13□□□□□ -0.63
USP15-218ENST00000552346 SLC24A3Q9HC58 644 aa11.13□□□□□ -0.63
USP15-218ENST00000552346 NPAS3Q8IXF0 933 aa11.12□□□□□ -0.63
USP15-218ENST00000552346 LILRB3O75022 631 aa11.11□□□□□ -0.63
USP15-218ENST00000552346 VEGFBP49765 207 aa11.11□□□□□ -0.63
USP15-218ENST00000552346 C4orf48Q5BLP8 95 aa11.11□□□□□ -0.63
USP15-218ENST00000552346 BPHLQ86WA6 291 aaPredicted RBP11.11□□□□□ -0.63
USP15-218ENST00000552346 PURBQ96QR8 312 aaKnown RBP11.11□□□□□ -0.63
USP15-218ENST00000552346 KLF16Q9BXK1 252 aaPredicted RBP11.11□□□□□ -0.63
USP15-218ENST00000552346 ARMC2Q8NEN0 867 aa11.09□□□□□ -0.63
USP15-218ENST00000552346 HELBQ8NG08 1087 aaPredicted RBP11.09□□□□□ -0.63
USP15-218ENST00000552346 IRF7Q92985 503 aa11.09□□□□□ -0.63
USP15-218ENST00000552346 ZIC2O95409 532 aaPredicted RBP11.08□□□□□ -0.64
USP15-218ENST00000552346 GMPRP36959 345 aa11.08□□□□□ -0.64
USP15-218ENST00000552346 NR5A1Q13285 461 aa11.08□□□□□ -0.64
USP15-218ENST00000552346 ZFAND3Q9H8U3 227 aa11.08□□□□□ -0.64
USP15-218ENST00000552346 H3BM21 787 aa11.07□□□□□ -0.64
USP15-218ENST00000552346 NR3C2P08235 984 aa11.07□□□□□ -0.64
USP15-218ENST00000552346 CLK2P49760 499 aaKnown RBP11.07□□□□□ -0.64
USP15-218ENST00000552346 RTL5Q5HYW3 569 aaPredicted RBP11.07□□□□□ -0.64
USP15-218ENST00000552346 GRM5P41594 1212 aa11.06□□□□□ -0.64
USP15-218ENST00000552346 ITPKCQ96DU7 683 aa11.06□□□□□ -0.64
USP15-218ENST00000552346 NBPF14Q5TI25 921 aa11.05□□□□□ -0.64
USP15-218ENST00000552346 RSPH6AQ9H0K4 717 aa11.05□□□□□ -0.64
USP15-218ENST00000552346 SOBPA7XYQ1 873 aa11.04□□□□□ -0.64
USP15-218ENST00000552346 POLR3EQ9NVU0 708 aa11.04□□□□□ -0.64
USP15-218ENST00000552346 C6orf118Q5T5N4 469 aa11.03□□□□□ -0.64
USP15-218ENST00000552346 SH3RF1Q7Z6J0 888 aa11.03□□□□□ -0.64
USP15-218ENST00000552346 C1QTNF2Q9BXJ5 285 aa11.03□□□□□ -0.64
USP15-218ENST00000552346 ERBB4Q15303 1308 aa11.03□□□□□ -0.64
USP15-218ENST00000552346 MAGEB6P1A0A0J9YX57 407 aa11.01□□□□□ -0.65
USP15-218ENST00000552346 FSHRP23945 695 aa11.01□□□□□ -0.65
USP15-218ENST00000552346 SH3BP5LQ7L8J4 393 aa11.01□□□□□ -0.65
USP15-218ENST00000552346 VASH1Q7L8A9 365 aaPredicted RBP11□□□□□ -0.65
USP15-218ENST00000552346 MAP4K5Q9Y4K4 846 aa11□□□□□ -0.65
USP15-218ENST00000552346 FAM181BA6NEQ2 426 aa10.99□□□□□ -0.65
USP15-218ENST00000552346 MAN1A2O60476 641 aa10.99□□□□□ -0.65
USP15-218ENST00000552346 UPP2O95045 317 aa10.99□□□□□ -0.65
USP15-218ENST00000552346 TRMT44Q8IYL2 757 aaKnown RBP10.99□□□□□ -0.65
USP15-218ENST00000552346 ZSCAN1Q8NBB4 408 aa10.99□□□□□ -0.65
USP15-218ENST00000552346 BMP2P12643 396 aa10.98□□□□□ -0.65
USP15-218ENST00000552346 LINC00528Q8N1L1 170 aa10.98□□□□□ -0.65
USP15-218ENST00000552346 MEIOBQ8N635 442 aa10.98□□□□□ -0.65
USP15-218ENST00000552346 GPKOWQ92917 476 aaPredicted RBP eCLIP10.98□□□□□ -0.65
USP15-218ENST00000552346 CARD14Q9BXL6 1004 aa10.98□□□□□ -0.65
USP15-218ENST00000552346 CTDSPL2Q05D32 466 aa10.97□□□□□ -0.65
USP15-218ENST00000552346 LORP23490 312 aaPredicted RBP10.96□□□□□ -0.65
USP15-218ENST00000552346 CCDC116Q8IYX3 515 aa10.95□□□□□ -0.66
USP15-218ENST00000552346 EMILIN1Q9Y6C2 1016 aa10.95□□□□□ -0.66
USP15-218ENST00000552346 ERFEQ4G0M1 354 aa10.94□□□□□ -0.66
USP15-218ENST00000552346 VSIG8P0DPA2 414 aa10.92□□□□□ -0.66
USP15-218ENST00000552346 LRRN4Q8WUT4 740 aa10.92□□□□□ -0.66
USP15-218ENST00000552346 TSEN34Q9BSV6 310 aaKnown RBP10.92□□□□□ -0.66
USP15-218ENST00000552346 SOS2Q07890 1332 aaPredicted RBP10.91□□□□□ -0.66
USP15-218ENST00000552346 SKIV2LQ15477 1246 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms