RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 NUTM2BA6NNL0 878 aaPredicted RBP13.98□□□□□ -0.17
PFDN5-213ENST00000550964 NUTM2EB1AL46 878 aaPredicted RBP13.98□□□□□ -0.17
PFDN5-213ENST00000550964 XPCQ01831 940 aaPredicted RBP13.98□□□□□ -0.17
PFDN5-213ENST00000550964 NUTM2AQ8IVF1 878 aaPredicted RBP13.98□□□□□ -0.17
PFDN5-213ENST00000550964 TESK2Q96S53 571 aa13.98□□□□□ -0.17
PFDN5-213ENST00000550964 TTC21AQ8NDW8 1320 aa13.97□□□□□ -0.17
PFDN5-213ENST00000550964 NLRP13Q86W25 1043 aa13.97□□□□□ -0.17
PFDN5-213ENST00000550964 TMC1Q8TDI8 760 aa13.96□□□□□ -0.17
PFDN5-213ENST00000550964 ABTB2Q8N961 1025 aa13.95□□□□□ -0.18
PFDN5-213ENST00000550964 NGLY1Q96IV0 654 aa13.95□□□□□ -0.18
PFDN5-213ENST00000550964 USP6P35125 1406 aa13.95□□□□□ -0.18
PFDN5-213ENST00000550964 MON2Q7Z3U7 1717 aa13.95□□□□□ -0.18
PFDN5-213ENST00000550964 KTN1Q86UP2 1357 aaKnown RBP13.95□□□□□ -0.18
PFDN5-213ENST00000550964 CPSF1Q10570 1443 aaKnown RBP13.93□□□□□ -0.18
PFDN5-213ENST00000550964 ABCA3Q99758 1704 aa13.93□□□□□ -0.18
PFDN5-213ENST00000550964 NWD2Q9ULI1 1742 aa13.93□□□□□ -0.18
PFDN5-213ENST00000550964 ADAMTS2O95450 1211 aa13.92□□□□□ -0.18
PFDN5-213ENST00000550964 ZEB1P37275 1124 aaPredicted RBP13.92□□□□□ -0.18
PFDN5-213ENST00000550964 C8orf37Q96NL8 207 aa13.92□□□□□ -0.18
PFDN5-213ENST00000550964 LRP6O75581 1613 aa13.92□□□□□ -0.18
PFDN5-213ENST00000550964 EDC4Q6P2E9 1401 aaKnown RBP13.91□□□□□ -0.18
PFDN5-213ENST00000550964 KCNH5Q8NCM2 988 aa13.91□□□□□ -0.18
PFDN5-213ENST00000550964 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.9□□□□□ -0.18
PFDN5-213ENST00000550964 HSPA5P11021 654 aaKnown RBP13.9□□□□□ -0.18
PFDN5-213ENST00000550964 FNBP4Q8N3X1 1017 aaPredicted RBP13.9□□□□□ -0.18
PFDN5-213ENST00000550964 COL14A1Q05707 1796 aaKnown RBP13.9□□□□□ -0.18
PFDN5-213ENST00000550964 AFF2P51816 1311 aa13.9□□□□□ -0.19
PFDN5-213ENST00000550964 TTC21BQ7Z4L5 1316 aa13.9□□□□□ -0.19
PFDN5-213ENST00000550964 ANKRD36BQ8N2N9 1353 aa13.89□□□□□ -0.19
PFDN5-213ENST00000550964 NLRP6P59044 892 aa13.89□□□□□ -0.19
PFDN5-213ENST00000550964 SLC12A5Q9H2X9 1139 aa13.89□□□□□ -0.19
PFDN5-213ENST00000550964 TRPC5Q9UL62 973 aaPredicted RBP13.89□□□□□ -0.19
PFDN5-213ENST00000550964 CRYBG1Q9Y4K1 1723 aa13.89□□□□□ -0.19
PFDN5-213ENST00000550964 PHRF1Q9P1Y6 1649 aaKnown RBP13.89□□□□□ -0.19
PFDN5-213ENST00000550964 USP21Q9UK80 565 aa13.88□□□□□ -0.19
PFDN5-213ENST00000550964 SSH2Q76I76 1423 aa13.88□□□□□ -0.19
PFDN5-213ENST00000550964 NRKQ7Z2Y5 1582 aa13.88□□□□□ -0.19
PFDN5-213ENST00000550964 USP54Q70EL1 1684 aa13.87□□□□□ -0.19
PFDN5-213ENST00000550964 USP19O94966 1318 aa13.87□□□□□ -0.19
PFDN5-213ENST00000550964 RXRBP28702 533 aa13.86□□□□□ -0.19
PFDN5-213ENST00000550964 PRDM11Q9NQV5 511 aa13.86□□□□□ -0.19
PFDN5-213ENST00000550964 PIK3C2AO00443 1686 aa13.85□□□□□ -0.19
PFDN5-213ENST00000550964 PLCH1Q4KWH8 1693 aa13.85□□□□□ -0.19
PFDN5-213ENST00000550964 A0A1W2PP64 1363 aa13.85□□□□□ -0.19
PFDN5-213ENST00000550964 CPDO75976 1380 aa13.85□□□□□ -0.19
PFDN5-213ENST00000550964 USP31Q70CQ4 1352 aa13.85□□□□□ -0.19
PFDN5-213ENST00000550964 GCP02774 474 aa13.85□□□□□ -0.19
PFDN5-213ENST00000550964 RBM6P78332 1123 aaKnown RBP13.85□□□□□ -0.19
PFDN5-213ENST00000550964 UNC5CLQ8IV45 518 aa13.85□□□□□ -0.19
PFDN5-213ENST00000550964 CABLES1Q8TDN4 633 aa13.85□□□□□ -0.19
PFDN5-213ENST00000550964 QTRT2Q9H974 415 aaKnown RBP13.85□□□□□ -0.19
PFDN5-213ENST00000550964 CDK12Q9NYV4 1490 aaPredicted RBP13.85□□□□□ -0.19
PFDN5-213ENST00000550964 CD163L1Q9NR16 1453 aa13.84□□□□□ -0.19
PFDN5-213ENST00000550964 SLIT2O94813 1529 aa13.84□□□□□ -0.19
PFDN5-213ENST00000550964 COG3Q96JB2 828 aa13.83□□□□□ -0.2
PFDN5-213ENST00000550964 RGS17Q9UGC6 210 aaPredicted RBP13.83□□□□□ -0.2
PFDN5-213ENST00000550964 SLIT3O75094 1523 aa13.83□□□□□ -0.2
PFDN5-213ENST00000550964 MYOM1P52179 1685 aa13.82□□□□□ -0.2
PFDN5-213ENST00000550964 ABCC6O95255 1503 aa13.82□□□□□ -0.2
PFDN5-213ENST00000550964 NUTM2GQ5VZR2 741 aa13.82□□□□□ -0.2
PFDN5-213ENST00000550964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.82□□□□□ -0.2
PFDN5-213ENST00000550964 KIF20BQ96Q89 1820 aa13.82□□□□□ -0.2
PFDN5-213ENST00000550964 FAM83GA6ND36 823 aa13.81□□□□□ -0.2
PFDN5-213ENST00000550964 POLR3GLQ9BT43 218 aa13.81□□□□□ -0.2
PFDN5-213ENST00000550964 CGNL1Q0VF96 1302 aa13.81□□□□□ -0.2
PFDN5-213ENST00000550964 KIAA0232Q92628 1395 aa13.81□□□□□ -0.2
PFDN5-213ENST00000550964 BCL9LQ86UU0 1499 aa13.8□□□□□ -0.2
PFDN5-213ENST00000550964 PLEKHG5O94827 1062 aa13.8□□□□□ -0.2
PFDN5-213ENST00000550964 EVA1CP58658 441 aa13.8□□□□□ -0.2
PFDN5-213ENST00000550964 VPS72Q15906 364 aa13.8□□□□□ -0.2
PFDN5-213ENST00000550964 BTG4Q9NY30 223 aa13.8□□□□□ -0.2
PFDN5-213ENST00000550964 AATKQ6ZMQ8 1374 aa13.8□□□□□ -0.2
PFDN5-213ENST00000550964 ATRNO75882 1429 aa13.8□□□□□ -0.2
PFDN5-213ENST00000550964 ZC3H6P61129 1189 aaKnown RBP13.79□□□□□ -0.2
PFDN5-213ENST00000550964 POTEAQ6S8J7 498 aa13.79□□□□□ -0.2
PFDN5-213ENST00000550964 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
PFDN5-213ENST00000550964 CCDC9Q9Y3X0 531 aaKnown RBP13.78□□□□□ -0.2
PFDN5-213ENST00000550964 NRAPQ86VF7 1730 aa13.78□□□□□ -0.2
PFDN5-213ENST00000550964 LTN1O94822 1766 aa13.78□□□□□ -0.2
PFDN5-213ENST00000550964 NSD2O96028 1365 aa13.77□□□□□ -0.21
PFDN5-213ENST00000550964 ARHGEF25Q86VW2 580 aa13.76□□□□□ -0.21
PFDN5-213ENST00000550964 NME9Q86XW9 330 aa13.76□□□□□ -0.21
PFDN5-213ENST00000550964 THRAP3Q9Y2W1 955 aaKnown RBP13.76□□□□□ -0.21
PFDN5-213ENST00000550964 KNSTRNQ9Y448 316 aa13.76□□□□□ -0.21
PFDN5-213ENST00000550964 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
PFDN5-213ENST00000550964 OVOS2A0A0J9YW53 1432 aa13.75□□□□□ -0.21
PFDN5-213ENST00000550964 OVOS2Q6IE36 1432 aa13.75□□□□□ -0.21
PFDN5-213ENST00000550964 KIF24Q5T7B8 1368 aa13.75□□□□□ -0.21
PFDN5-213ENST00000550964 FYB1O15117 783 aa13.75□□□□□ -0.21
PFDN5-213ENST00000550964 LMO7Q8WWI1 1683 aa13.75□□□□□ -0.21
PFDN5-213ENST00000550964 NSD3Q9BZ95 1437 aa13.74□□□□□ -0.21
PFDN5-213ENST00000550964 PANK3Q9H999 370 aa13.74□□□□□ -0.21
PFDN5-213ENST00000550964 FAM208AQ9UK61 1670 aaKnown RBP13.74□□□□□ -0.21
PFDN5-213ENST00000550964 NFAT5O94916 1531 aa13.74□□□□□ -0.21
PFDN5-213ENST00000550964 KIF7Q2M1P5 1343 aa13.73□□□□□ -0.21
PFDN5-213ENST00000550964 C11orf95C9JLR9 678 aaPredicted RBP13.73□□□□□ -0.21
PFDN5-213ENST00000550964 CDCA7Q9BWT1 371 aaPredicted RBP13.73□□□□□ -0.21
PFDN5-213ENST00000550964 COL18A1P39060 1754 aa13.73□□□□□ -0.21
PFDN5-213ENST00000550964 BLMP54132 1417 aaPredicted RBP13.73□□□□□ -0.21
PFDN5-213ENST00000550964 SPATA31A5Q5VU36 1347 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms