RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 WIPF1O43516 503 aa7.15□□□□□ -1.26
CCNT1-203ENST00000550457 HRCP23327 699 aa7.14□□□□□ -1.27
CCNT1-203ENST00000550457 CABLES1Q8TDN4 633 aa7.14□□□□□ -1.27
CCNT1-203ENST00000550457 AK7Q96M32 723 aa7.14□□□□□ -1.27
CCNT1-203ENST00000550457 MAP10Q9P2G4 905 aa7.13□□□□□ -1.27
CCNT1-203ENST00000550457 F12P00748 615 aaPredicted RBP7.12□□□□□ -1.27
CCNT1-203ENST00000550457 VARSP26640 1264 aaKnown RBP7.12□□□□□ -1.27
CCNT1-203ENST00000550457 CTHP32929 405 aa7.12□□□□□ -1.27
CCNT1-203ENST00000550457 DIXDC1Q155Q3 683 aa7.12□□□□□ -1.27
CCNT1-203ENST00000550457 RIC3Q7Z5B4 369 aa7.12□□□□□ -1.27
CCNT1-203ENST00000550457 MPNDQ8N594 471 aa7.12□□□□□ -1.27
CCNT1-203ENST00000550457 ZBTB3Q9H5J0 574 aa7.12□□□□□ -1.27
CCNT1-203ENST00000550457 PER1O15534 1290 aaPredicted RBP7.11□□□□□ -1.27
CCNT1-203ENST00000550457 NNTQ13423 1086 aa7.11□□□□□ -1.27
CCNT1-203ENST00000550457 FOXJ1Q92949 421 aa7.11□□□□□ -1.27
CCNT1-203ENST00000550457 LIMD1Q9UGP4 676 aa7.11□□□□□ -1.27
CCNT1-203ENST00000550457 QPCTQ16769 361 aa7.1□□□□□ -1.27
CCNT1-203ENST00000550457 CSPP1Q1MSJ5 1256 aa7.1□□□□□ -1.27
CCNT1-203ENST00000550457 PRPF38BQ5VTL8 546 aaKnown RBP7.1□□□□□ -1.27
CCNT1-203ENST00000550457 PLEKHG3A1L390 1219 aa7.09□□□□□ -1.27
CCNT1-203ENST00000550457 TIMP2P16035 220 aa7.09□□□□□ -1.27
CCNT1-203ENST00000550457 PDE4DQ08499 809 aa7.09□□□□□ -1.27
CCNT1-203ENST00000550457 C4orf48Q5BLP8 95 aa7.09□□□□□ -1.27
CCNT1-203ENST00000550457 MYSM1Q5VVJ2 828 aa7.09□□□□□ -1.27
CCNT1-203ENST00000550457 ZFP42Q96MM3 310 aa7.09□□□□□ -1.27
CCNT1-203ENST00000550457 KLF16Q9BXK1 252 aaPredicted RBP7.09□□□□□ -1.27
CCNT1-203ENST00000550457 FAM174AQ8TBP5 190 aa7.08□□□□□ -1.28
CCNT1-203ENST00000550457 NXF1Q9UBU9 619 aaKnown RBP7.08□□□□□ -1.28
CCNT1-203ENST00000550457 ADH1CP00326 375 aa7.07□□□□□ -1.28
CCNT1-203ENST00000550457 VEGFBP49765 207 aa7.07□□□□□ -1.28
CCNT1-203ENST00000550457 WDR4P57081 412 aaKnown RBP7.07□□□□□ -1.28
CCNT1-203ENST00000550457 CDK15Q96Q40 435 aa7.07□□□□□ -1.28
CCNT1-203ENST00000550457 STK17AQ9UEE5 414 aa7.07□□□□□ -1.28
CCNT1-203ENST00000550457 LILRB3O75022 631 aa7.06□□□□□ -1.28
CCNT1-203ENST00000550457 INSM1Q01101 510 aaPredicted RBP7.06□□□□□ -1.28
CCNT1-203ENST00000550457 MRPL14Q6P1L8 145 aaKnown RBP7.06□□□□□ -1.28
CCNT1-203ENST00000550457 SLC24A3Q9HC58 644 aa7.06□□□□□ -1.28
CCNT1-203ENST00000550457 NR3C2P08235 984 aa7.05□□□□□ -1.28
CCNT1-203ENST00000550457 GMPRP36959 345 aa7.05□□□□□ -1.28
CCNT1-203ENST00000550457 ARID5BQ14865 1188 aa7.05□□□□□ -1.28
CCNT1-203ENST00000550457 TUSC1Q2TAM9 212 aa7.05□□□□□ -1.28
CCNT1-203ENST00000550457 RTL5Q5HYW3 569 aaPredicted RBP7.05□□□□□ -1.28
CCNT1-203ENST00000550457 PURBQ96QR8 312 aaKnown RBP7.05□□□□□ -1.28
CCNT1-203ENST00000550457 ERBB4Q15303 1308 aa7.04□□□□□ -1.28
CCNT1-203ENST00000550457 NUTM2BA6NNL0 878 aaPredicted RBP7.04□□□□□ -1.28
CCNT1-203ENST00000550457 SOBPA7XYQ1 873 aa7.04□□□□□ -1.28
CCNT1-203ENST00000550457 NUTM2EB1AL46 878 aaPredicted RBP7.04□□□□□ -1.28
CCNT1-203ENST00000550457 H3BM21 787 aa7.04□□□□□ -1.28
CCNT1-203ENST00000550457 GRM5P41594 1212 aa7.04□□□□□ -1.28
CCNT1-203ENST00000550457 NUTM2DQ5VT03 806 aaPredicted RBP7.04□□□□□ -1.28
CCNT1-203ENST00000550457 NUTM2AQ8IVF1 878 aaPredicted RBP7.04□□□□□ -1.28
CCNT1-203ENST00000550457 TSC1Q92574 1164 aa7.04□□□□□ -1.28
CCNT1-203ENST00000550457 ZFAND3Q9H8U3 227 aa7.04□□□□□ -1.28
CCNT1-203ENST00000550457 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
CCNT1-203ENST00000550457 NPAS3Q8IXF0 933 aa7.03□□□□□ -1.28
CCNT1-203ENST00000550457 SLC16A10Q8TF71 515 aa7.03□□□□□ -1.28
CCNT1-203ENST00000550457 ITPKCQ96DU7 683 aa7.03□□□□□ -1.28
CCNT1-203ENST00000550457 ZIC2O95409 532 aaPredicted RBP7.02□□□□□ -1.29
CCNT1-203ENST00000550457 AGERQ15109 404 aa7.02□□□□□ -1.29
CCNT1-203ENST00000550457 SH3RF1Q7Z6J0 888 aa7.02□□□□□ -1.29
CCNT1-203ENST00000550457 BPHLQ86WA6 291 aaPredicted RBP7.02□□□□□ -1.29
CCNT1-203ENST00000550457 C1QTNF2Q9BXJ5 285 aa7.02□□□□□ -1.29
CCNT1-203ENST00000550457 CLK2P49760 499 aaKnown RBP7.01□□□□□ -1.29
CCNT1-203ENST00000550457 NR5A1Q13285 461 aa7.01□□□□□ -1.29
CCNT1-203ENST00000550457 SCARF1Q14162 830 aa7.01□□□□□ -1.29
CCNT1-203ENST00000550457 POLR3EQ9NVU0 708 aa7.01□□□□□ -1.29
CCNT1-203ENST00000550457 SH3BP5LQ7L8J4 393 aa7□□□□□ -1.29
CCNT1-203ENST00000550457 IRF7Q92985 503 aa7□□□□□ -1.29
CCNT1-203ENST00000550457 C6orf118Q5T5N4 469 aa6.99□□□□□ -1.29
CCNT1-203ENST00000550457 FBXO31Q5XUX0 539 aaPredicted RBP6.99□□□□□ -1.29
CCNT1-203ENST00000550457 ARMC2Q8NEN0 867 aa6.98□□□□□ -1.29
CCNT1-203ENST00000550457 HELBQ8NG08 1087 aaPredicted RBP6.98□□□□□ -1.29
CCNT1-203ENST00000550457 MAGEB6P1A0A0J9YX57 407 aa6.97□□□□□ -1.29
CCNT1-203ENST00000550457 FSHRP23945 695 aa6.97□□□□□ -1.29
CCNT1-203ENST00000550457 CTDSPL2Q05D32 466 aa6.97□□□□□ -1.29
CCNT1-203ENST00000550457 NBPF14Q5TI25 921 aa6.97□□□□□ -1.29
CCNT1-203ENST00000550457 TRMT44Q8IYL2 757 aaKnown RBP6.97□□□□□ -1.29
CCNT1-203ENST00000550457 MEIOBQ8N635 442 aa6.97□□□□□ -1.29
CCNT1-203ENST00000550457 LINC00528Q8N1L1 170 aa6.96□□□□□ -1.3
CCNT1-203ENST00000550457 CARD14Q9BXL6 1004 aa6.96□□□□□ -1.3
CCNT1-203ENST00000550457 RSPH6AQ9H0K4 717 aa6.96□□□□□ -1.3
CCNT1-203ENST00000550457 MAP4K5Q9Y4K4 846 aa6.96□□□□□ -1.3
CCNT1-203ENST00000550457 MAN1A2O60476 641 aa6.95□□□□□ -1.3
CCNT1-203ENST00000550457 VASH1Q7L8A9 365 aaPredicted RBP6.95□□□□□ -1.3
CCNT1-203ENST00000550457 ZSCAN1Q8NBB4 408 aa6.95□□□□□ -1.3
CCNT1-203ENST00000550457 LRRN4Q8WUT4 740 aa6.95□□□□□ -1.3
CCNT1-203ENST00000550457 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
CCNT1-203ENST00000550457 VSIG8P0DPA2 414 aa6.94□□□□□ -1.3
CCNT1-203ENST00000550457 BMP2P12643 396 aa6.94□□□□□ -1.3
CCNT1-203ENST00000550457 ERFEQ4G0M1 354 aa6.94□□□□□ -1.3
CCNT1-203ENST00000550457 KRTAP4-6Q9BYQ5 205 aa6.94□□□□□ -1.3
CCNT1-203ENST00000550457 PROCA1Q8NCQ7 364 aaPredicted RBP6.93□□□□□ -1.3
CCNT1-203ENST00000550457 GPKOWQ92917 476 aaPredicted RBP eCLIP6.93□□□□□ -1.3
CCNT1-203ENST00000550457 DNMT3LQ9UJW3 386 aa6.93□□□□□ -1.3
CCNT1-203ENST00000550457 SOS2Q07890 1332 aaPredicted RBP6.93□□□□□ -1.3
CCNT1-203ENST00000550457 PPFIA3O75145 1194 aa6.92□□□□□ -1.3
CCNT1-203ENST00000550457 CCDC116Q8IYX3 515 aa6.92□□□□□ -1.3
CCNT1-203ENST00000550457 GPBP1L1Q9HC44 474 aaPredicted RBP6.92□□□□□ -1.3
CCNT1-203ENST00000550457 UPP2O95045 317 aa6.91□□□□□ -1.3
CCNT1-203ENST00000550457 CBLBQ13191 982 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms