RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 ARHGEF12Q9NZN5 1544 aa12.43□□□□□ -0.42
SMARCC2-209ENST00000550164 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
SMARCC2-209ENST00000550164 UBE2Q2Q8WVN8 375 aa12.43□□□□□ -0.42
SMARCC2-209ENST00000550164 RRAGDQ9NQL2 400 aaPredicted RBP12.43□□□□□ -0.42
SMARCC2-209ENST00000550164 SMC3Q9UQE7 1217 aa12.43□□□□□ -0.42
SMARCC2-209ENST00000550164 FAM135AQ9P2D6 1515 aa12.42□□□□□ -0.42
SMARCC2-209ENST00000550164 HTATSF1O43719 755 aaKnown RBP12.42□□□□□ -0.42
SMARCC2-209ENST00000550164 CCDC27Q2M243 656 aa12.42□□□□□ -0.42
SMARCC2-209ENST00000550164 CARD14Q9BXL6 1004 aa12.42□□□□□ -0.42
SMARCC2-209ENST00000550164 CWC22Q9HCG8 908 aaKnown RBP12.42□□□□□ -0.42
SMARCC2-209ENST00000550164 GCC2Q8IWJ2 1684 aa12.41□□□□□ -0.42
SMARCC2-209ENST00000550164 COL17A1Q9UMD9 1497 aaPredicted RBP12.41□□□□□ -0.42
SMARCC2-209ENST00000550164 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.41□□□□□ -0.42
SMARCC2-209ENST00000550164 A0A0G2JS52 829 aa12.41□□□□□ -0.42
SMARCC2-209ENST00000550164 ERC2O15083 957 aa12.41□□□□□ -0.42
SMARCC2-209ENST00000550164 CLCN1P35523 988 aa12.41□□□□□ -0.42
SMARCC2-209ENST00000550164 TBC1D9Q6ZT07 1266 aa12.41□□□□□ -0.42
SMARCC2-209ENST00000550164 CDK19Q9BWU1 502 aa12.41□□□□□ -0.42
SMARCC2-209ENST00000550164 TSPY26PQ9H489 355 aa12.41□□□□□ -0.42
SMARCC2-209ENST00000550164 SYCE3A1L190 88 aa12.41□□□□□ -0.42
SMARCC2-209ENST00000550164 FCHSD2O94868 740 aa12.41□□□□□ -0.42
SMARCC2-209ENST00000550164 SLC4A2P04920 1241 aa12.41□□□□□ -0.42
SMARCC2-209ENST00000550164 ZNF592Q92610 1267 aa12.4□□□□□ -0.42
SMARCC2-209ENST00000550164 BCL11BQ9C0K0 894 aaPredicted RBP12.4□□□□□ -0.42
SMARCC2-209ENST00000550164 ATP10BO94823 1461 aa12.4□□□□□ -0.42
SMARCC2-209ENST00000550164 MAP7D2Q96T17 732 aa12.4□□□□□ -0.42
SMARCC2-209ENST00000550164 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
SMARCC2-209ENST00000550164 ZMYM4Q5VZL5 1548 aa12.4□□□□□ -0.42
SMARCC2-209ENST00000550164 FIBPO43427 364 aa12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 SMARCA5O60264 1052 aaPredicted RBP12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 UQCRHLA0A096LP55 91 aa12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 UQCRHP07919 91 aa12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 DCTN1Q14203 1278 aa12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 BMP2KLQ5H9B9 411 aa12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 SULT6B1Q6IMI4 303 aa12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 SAMD9Q5K651 1589 aa12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 HDAC1Q13547 482 aaPredicted RBP12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 BLMP54132 1417 aaPredicted RBP12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 ZKSCAN1P17029 563 aaPredicted RBP12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 XPCQ01831 940 aaPredicted RBP12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 NFE2L2Q16236 605 aa12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 CCDC9Q9Y3X0 531 aaKnown RBP12.39□□□□□ -0.43
SMARCC2-209ENST00000550164 ZNF428Q96B54 188 aa12.38□□□□□ -0.43
SMARCC2-209ENST00000550164 BAG4O95429 457 aaKnown RBP12.38□□□□□ -0.43
SMARCC2-209ENST00000550164 RRS1Q15050 365 aaKnown RBP12.38□□□□□ -0.43
SMARCC2-209ENST00000550164 ITSN2Q9NZM3 1697 aa12.38□□□□□ -0.43
SMARCC2-209ENST00000550164 MCM2P49736 904 aa12.38□□□□□ -0.43
SMARCC2-209ENST00000550164 ALDH1L2Q3SY69 923 aa12.38□□□□□ -0.43
SMARCC2-209ENST00000550164 PIK3C2GO75747 1445 aa12.38□□□□□ -0.43
SMARCC2-209ENST00000550164 GOLGA6L19H0YKK7 550 aa12.37□□□□□ -0.43
SMARCC2-209ENST00000550164 H3BQV1 296 aa12.37□□□□□ -0.43
SMARCC2-209ENST00000550164 IFFO2Q5TF58 517 aa12.37□□□□□ -0.43
SMARCC2-209ENST00000550164 RUFY2Q8WXA3 655 aa12.37□□□□□ -0.43
SMARCC2-209ENST00000550164 SURF6O75683 361 aaKnown RBP12.37□□□□□ -0.43
SMARCC2-209ENST00000550164 A2MP01023 1474 aa12.37□□□□□ -0.43
SMARCC2-209ENST00000550164 BECN2A8MW95 431 aa12.37□□□□□ -0.43
SMARCC2-209ENST00000550164 UBTFL1P0CB47 393 aaPredicted RBP12.36□□□□□ -0.43
SMARCC2-209ENST00000550164 FBLN1P23142 703 aa12.36□□□□□ -0.43
SMARCC2-209ENST00000550164 NUCB1Q02818 461 aa12.36□□□□□ -0.43
SMARCC2-209ENST00000550164 BICD2Q8TD16 824 aa12.36□□□□□ -0.43
SMARCC2-209ENST00000550164 CHMP4AQ9BY43 222 aa12.36□□□□□ -0.43
SMARCC2-209ENST00000550164 UPF3BQ9BZI7 483 aaKnown RBP12.36□□□□□ -0.43
SMARCC2-209ENST00000550164 C9orf78Q9NZ63 289 aaPredicted RBP12.36□□□□□ -0.43
SMARCC2-209ENST00000550164 EXOC6BQ9Y2D4 811 aa12.36□□□□□ -0.43
SMARCC2-209ENST00000550164 NUP160Q12769 1436 aa12.36□□□□□ -0.43
SMARCC2-209ENST00000550164 GNL2Q13823 731 aaKnown RBP12.36□□□□□ -0.43
SMARCC2-209ENST00000550164 GNAI2P04899 355 aa12.35□□□□□ -0.43
SMARCC2-209ENST00000550164 IFIT2P09913 472 aaKnown RBP12.35□□□□□ -0.43
SMARCC2-209ENST00000550164 FAM184AQ8NB25 1140 aa12.35□□□□□ -0.43
SMARCC2-209ENST00000550164 HDAC5Q9UQL6 1122 aa12.35□□□□□ -0.43
SMARCC2-209ENST00000550164 GNAI3P08754 354 aa12.35□□□□□ -0.43
SMARCC2-209ENST00000550164 MTERF4Q7Z6M4 381 aaKnown RBP12.35□□□□□ -0.43
SMARCC2-209ENST00000550164 IFT57Q9NWB7 429 aa12.35□□□□□ -0.43
SMARCC2-209ENST00000550164 POLR3AO14802 1390 aaPredicted RBP12.35□□□□□ -0.43
SMARCC2-209ENST00000550164 ABCC11Q96J66 1382 aa12.35□□□□□ -0.43
SMARCC2-209ENST00000550164 RPAP2Q8IXW5 612 aaPredicted RBP12.35□□□□□ -0.43
SMARCC2-209ENST00000550164 SPC24Q8NBT2 197 aa12.35□□□□□ -0.43
SMARCC2-209ENST00000550164 MAP4K4O95819 1239 aaPredicted RBP12.35□□□□□ -0.43
SMARCC2-209ENST00000550164 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
SMARCC2-209ENST00000550164 KIAA0556O60303 1618 aa12.34□□□□□ -0.43
SMARCC2-209ENST00000550164 NOS1P29475 1434 aa12.34□□□□□ -0.43
SMARCC2-209ENST00000550164 TEFQ10587 303 aa12.34□□□□□ -0.43
SMARCC2-209ENST00000550164 SF3A1Q15459 793 aaKnown RBP12.34□□□□□ -0.43
SMARCC2-209ENST00000550164 KLHL40Q2TBA0 621 aa12.34□□□□□ -0.43
SMARCC2-209ENST00000550164 ADGRL2O95490 1459 aa12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 ATAD2Q6PL18 1390 aa12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 ZNF771Q7L3S4 317 aaPredicted RBP12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 LRRCC1Q9C099 1032 aa12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 IL1RAPL2Q9NP60 686 aa12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 MIS18AQ9NYP9 233 aa12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 SYCP2Q9BX26 1530 aa12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 KDM5CP41229 1560 aa12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 GAS2L2Q8NHY3 880 aa12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 EMILIN1Q9Y6C2 1016 aa12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 DENND4BO75064 1496 aaPredicted RBP12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 TXNDC2Q86VQ3 553 aa12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 SMC5Q8IY18 1101 aa12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 FBXW7Q969H0 707 aa12.33□□□□□ -0.44
SMARCC2-209ENST00000550164 RPGRIP1LQ68CZ1 1315 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms