RNA–Protein interactions for RNA: ENST00000550082.5

NR4A1-213, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5 BASIC

Gene NR4A1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-213ENST00000550082 SUPT16HQ9Y5B9 1047 aaKnown RBP20.33■□□□□ 0.85
NR4A1-213ENST00000550082 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.32■□□□□ 0.84
NR4A1-213ENST00000550082 POLR3AO14802 1390 aaPredicted RBP20.32■□□□□ 0.84
NR4A1-213ENST00000550082 NPHP3Q7Z494 1330 aa20.32■□□□□ 0.84
NR4A1-213ENST00000550082 SENP3-EIF4A1A0A087X0R7 540 aa20.32■□□□□ 0.84
NR4A1-213ENST00000550082 NHSL1Q5SYE7 1610 aa20.31■□□□□ 0.84
NR4A1-213ENST00000550082 PHLPP1O60346 1717 aa20.31■□□□□ 0.84
NR4A1-213ENST00000550082 PXDNQ92626 1479 aa20.31■□□□□ 0.84
NR4A1-213ENST00000550082 KIF1AQ12756 1690 aa20.31■□□□□ 0.84
NR4A1-213ENST00000550082 KTN1Q86UP2 1357 aaKnown RBP20.31■□□□□ 0.84
NR4A1-213ENST00000550082 HNRNPUQ00839 825 aaKnown RBP eCLIP20.31■□□□□ 0.843e-6■□□□□ 8.3
NR4A1-213ENST00000550082 ZRANB1Q9UGI0 708 aa20.31■□□□□ 0.84
NR4A1-213ENST00000550082 SOS2Q07890 1332 aaPredicted RBP20.3■□□□□ 0.84
NR4A1-213ENST00000550082 ILDR1Q86SU0 546 aaPredicted RBP20.3■□□□□ 0.84
NR4A1-213ENST00000550082 CPSF1Q10570 1443 aaKnown RBP20.3■□□□□ 0.84
NR4A1-213ENST00000550082 HDGFL2Q7Z4V5 671 aaPredicted RBP20.29■□□□□ 0.84
NR4A1-213ENST00000550082 TERF2IPQ9NYB0 399 aa20.29■□□□□ 0.84
NR4A1-213ENST00000550082 PARD3Q8TEW0 1356 aa20.28■□□□□ 0.84
NR4A1-213ENST00000550082 USP6P35125 1406 aa20.28■□□□□ 0.84
NR4A1-213ENST00000550082 AKAP12Q02952 1782 aa20.28■□□□□ 0.84
NR4A1-213ENST00000550082 AHDC1Q5TGY3 1603 aaPredicted RBP20.27■□□□□ 0.84
NR4A1-213ENST00000550082 ANKRD36BQ8N2N9 1353 aa20.27■□□□□ 0.83
NR4A1-213ENST00000550082 COL16A1Q07092 1604 aaPredicted RBP20.26■□□□□ 0.83
NR4A1-213ENST00000550082 CABLES1Q8TDN4 633 aa20.26■□□□□ 0.83
NR4A1-213ENST00000550082 NME9Q86XW9 330 aa20.26■□□□□ 0.83
NR4A1-213ENST00000550082 ZNF692Q9BU19 519 aaPredicted RBP20.26■□□□□ 0.83
NR4A1-213ENST00000550082 TTC21BQ7Z4L5 1316 aa20.25■□□□□ 0.83
NR4A1-213ENST00000550082 TRPM3Q9HCF6 1732 aaPredicted RBP20.25■□□□□ 0.83
NR4A1-213ENST00000550082 MYBBP1AQ9BQG0 1328 aaKnown RBP20.25■□□□□ 0.83
NR4A1-213ENST00000550082 ABTB2Q8N961 1025 aa20.24■□□□□ 0.83
NR4A1-213ENST00000550082 SPATA31A3Q5VYP0 1347 aa20.24■□□□□ 0.83
NR4A1-213ENST00000550082 SSH2Q76I76 1423 aa20.24■□□□□ 0.83
NR4A1-213ENST00000550082 NSD3Q9BZ95 1437 aa20.24■□□□□ 0.83
NR4A1-213ENST00000550082 MON2Q7Z3U7 1717 aa20.23■□□□□ 0.83
NR4A1-213ENST00000550082 LRRC59Q96AG4 307 aaKnown RBP20.23■□□□□ 0.83
NR4A1-213ENST00000550082 NINLQ9Y2I6 1382 aa20.23■□□□□ 0.83
NR4A1-213ENST00000550082 RALBP1Q15311 655 aa20.22■□□□□ 0.83
NR4A1-213ENST00000550082 AMER1Q5JTC6 1135 aaPredicted RBP20.22■□□□□ 0.83
NR4A1-213ENST00000550082 SOX12O15370 315 aa20.21■□□□□ 0.83
NR4A1-213ENST00000550082 FBLN1P23142 703 aa20.21■□□□□ 0.83
NR4A1-213ENST00000550082 GGNBP2Q9H3C7 697 aa20.21■□□□□ 0.83
NR4A1-213ENST00000550082 NRKQ7Z2Y5 1582 aa20.2■□□□□ 0.82
NR4A1-213ENST00000550082 TNS3Q68CZ2 1445 aa20.2■□□□□ 0.82
NR4A1-213ENST00000550082 NUTM2BA6NNL0 878 aaPredicted RBP20.19■□□□□ 0.82
NR4A1-213ENST00000550082 NUTM2EB1AL46 878 aaPredicted RBP20.19■□□□□ 0.82
NR4A1-213ENST00000550082 NLRP6P59044 892 aa20.19■□□□□ 0.82
NR4A1-213ENST00000550082 NUTM2AQ8IVF1 878 aaPredicted RBP20.19■□□□□ 0.82
NR4A1-213ENST00000550082 PNISRQ8TF01 805 aaKnown RBP20.19■□□□□ 0.82
NR4A1-213ENST00000550082 FYB1O15117 783 aa20.19■□□□□ 0.82
NR4A1-213ENST00000550082 KNSTRNQ9Y448 316 aa20.19■□□□□ 0.82
NR4A1-213ENST00000550082 EDC4Q6P2E9 1401 aaKnown RBP20.18■□□□□ 0.82
NR4A1-213ENST00000550082 SBNO1A3KN83 1393 aa20.18■□□□□ 0.82
NR4A1-213ENST00000550082 PNPLA6Q8IY17 1366 aa20.18■□□□□ 0.82
NR4A1-213ENST00000550082 PIK3C2AO00443 1686 aa20.18■□□□□ 0.82
NR4A1-213ENST00000550082 ALS2Q96Q42 1657 aa20.18■□□□□ 0.82
NR4A1-213ENST00000550082 BRD4O60885 1362 aaPredicted RBP20.16■□□□□ 0.82
NR4A1-213ENST00000550082 TNNT2P45379 298 aaPredicted RBP20.14■□□□□ 0.81
NR4A1-213ENST00000550082 NLRP13Q86W25 1043 aa20.14■□□□□ 0.81
NR4A1-213ENST00000550082 TTC21AQ8NDW8 1320 aa20.13■□□□□ 0.81
NR4A1-213ENST00000550082 JCADQ9P266 1359 aa20.13■□□□□ 0.81
NR4A1-213ENST00000550082 ADAMTS2O95450 1211 aa20.13■□□□□ 0.81
NR4A1-213ENST00000550082 MED1Q15648 1581 aaPredicted RBP20.13■□□□□ 0.81
NR4A1-213ENST00000550082 MARF1Q9Y4F3 1742 aaKnown RBP20.11■□□□□ 0.81
NR4A1-213ENST00000550082 ZBTB7CA1YPR0 619 aa20.11■□□□□ 0.81
NR4A1-213ENST00000550082 ZC3H6P61129 1189 aaKnown RBP20.11■□□□□ 0.81
NR4A1-213ENST00000550082 CGNL1Q0VF96 1302 aa20.11■□□□□ 0.81
NR4A1-213ENST00000550082 ARHGEF10O15013 1369 aa20.11■□□□□ 0.81
NR4A1-213ENST00000550082 PPP2R1AP30153 589 aa20.1■□□□□ 0.81
NR4A1-213ENST00000550082 HAP1P54257 671 aaPredicted RBP20.1■□□□□ 0.81
NR4A1-213ENST00000550082 GCP02774 474 aa20.09■□□□□ 0.81
NR4A1-213ENST00000550082 COG3Q96JB2 828 aa20.09■□□□□ 0.81
NR4A1-213ENST00000550082 KIF20BQ96Q89 1820 aa20.08■□□□□ 0.81
NR4A1-213ENST00000550082 LRP6O75581 1613 aa20.08■□□□□ 0.81
NR4A1-213ENST00000550082 SHPRHQ149N8 1683 aa20.08■□□□□ 0.81
NR4A1-213ENST00000550082 CHRNA2Q15822 529 aa20.07■□□□□ 0.8
NR4A1-213ENST00000550082 OVOS2A0A0J9YW53 1432 aa20.06■□□□□ 0.8
NR4A1-213ENST00000550082 OVOS2Q6IE36 1432 aa20.06■□□□□ 0.8
NR4A1-213ENST00000550082 RRS1Q15050 365 aaKnown RBP20.06■□□□□ 0.8
NR4A1-213ENST00000550082 CRYBG1Q9Y4K1 1723 aa20.06■□□□□ 0.8
NR4A1-213ENST00000550082 USP31Q70CQ4 1352 aa20.05■□□□□ 0.8
NR4A1-213ENST00000550082 USP19O94966 1318 aa20.05■□□□□ 0.8
NR4A1-213ENST00000550082 ZBED9Q6R2W3 1325 aa20.05■□□□□ 0.8
NR4A1-213ENST00000550082 NEFLP07196 543 aa20.05■□□□□ 0.8
NR4A1-213ENST00000550082 COL22A1Q8NFW1 1626 aaPredicted RBP20.05■□□□□ 0.8
NR4A1-213ENST00000550082 ABCA3Q99758 1704 aa20.04■□□□□ 0.8
NR4A1-213ENST00000550082 PHRF1Q9P1Y6 1649 aaKnown RBP20.04■□□□□ 0.8
NR4A1-213ENST00000550082 MORC1Q86VD1 984 aa20.03■□□□□ 0.8
NR4A1-213ENST00000550082 NPC1L1Q9UHC9 1359 aa20.03■□□□□ 0.8
NR4A1-213ENST00000550082 FAM83GA6ND36 823 aa20.03■□□□□ 0.8
NR4A1-213ENST00000550082 KIAA0232Q92628 1395 aa20.03■□□□□ 0.8
NR4A1-213ENST00000550082 C8orf37Q96NL8 207 aa20.02■□□□□ 0.8
NR4A1-213ENST00000550082 SALL2Q9Y467 1007 aaPredicted RBP20.02■□□□□ 0.8
NR4A1-213ENST00000550082 SPATA31A6Q5VVP1 1343 aa20.02■□□□□ 0.8
NR4A1-213ENST00000550082 PPM1GO15355 546 aaPredicted RBP20■□□□□ 0.79
NR4A1-213ENST00000550082 EMILIN1Q9Y6C2 1016 aa20■□□□□ 0.79
NR4A1-213ENST00000550082 SLIT3O75094 1523 aa20■□□□□ 0.79
NR4A1-213ENST00000550082 MEX3CQ5U5Q3 659 aaKnown RBP20■□□□□ 0.79
NR4A1-213ENST00000550082 PRDM11Q9NQV5 511 aa19.99■□□□□ 0.79
NR4A1-213ENST00000550082 AXIN2Q9Y2T1 843 aa19.99■□□□□ 0.79
NR4A1-213ENST00000550082 NFAT5O94916 1531 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms