RNA–Protein interactions for RNA: ENST00000549559.2

SYT1-207, Transcript of synaptotagmin 1, humanhuman

TSL 4

Gene SYT1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-207ENST00000549559 TERF2IPQ9NYB0 399 aa17.16■□□□□ 0.34
SYT1-207ENST00000549559 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
SYT1-207ENST00000549559 COL16A1Q07092 1604 aaPredicted RBP17.15■□□□□ 0.34
SYT1-207ENST00000549559 HDGFL2Q7Z4V5 671 aaPredicted RBP17.15■□□□□ 0.34
SYT1-207ENST00000549559 ZNF692Q9BU19 519 aaPredicted RBP17.15■□□□□ 0.34
SYT1-207ENST00000549559 SOS2Q07890 1332 aaPredicted RBP17.15■□□□□ 0.34
SYT1-207ENST00000549559 BRD4O60885 1362 aaPredicted RBP17.15■□□□□ 0.34
SYT1-207ENST00000549559 ANKRD36BQ8N2N9 1353 aa17.15■□□□□ 0.34
SYT1-207ENST00000549559 CPSF1Q10570 1443 aaKnown RBP17.14■□□□□ 0.33
SYT1-207ENST00000549559 KRT28Q7Z3Y7 464 aa17.14■□□□□ 0.33
SYT1-207ENST00000549559 USP6P35125 1406 aa17.13■□□□□ 0.33
SYT1-207ENST00000549559 CD163L1Q9NR16 1453 aa17.13■□□□□ 0.33
SYT1-207ENST00000549559 HSPA1LP34931 641 aa17.13■□□□□ 0.33
SYT1-207ENST00000549559 XPCQ01831 940 aaPredicted RBP17.13■□□□□ 0.33
SYT1-207ENST00000549559 WASHC2AQ641Q2 1341 aa17.13■□□□□ 0.33
SYT1-207ENST00000549559 SBNO1A3KN83 1393 aa17.13■□□□□ 0.33
SYT1-207ENST00000549559 KTN1Q86UP2 1357 aaKnown RBP17.13■□□□□ 0.33
SYT1-207ENST00000549559 MON2Q7Z3U7 1717 aa17.13■□□□□ 0.33
SYT1-207ENST00000549559 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
SYT1-207ENST00000549559 TRPM3Q9HCF6 1732 aaPredicted RBP17.12■□□□□ 0.33
SYT1-207ENST00000549559 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
SYT1-207ENST00000549559 LRRC59Q96AG4 307 aaKnown RBP17.11■□□□□ 0.33
SYT1-207ENST00000549559 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
SYT1-207ENST00000549559 TNS3Q68CZ2 1445 aa17.11■□□□□ 0.33
SYT1-207ENST00000549559 EDC4Q6P2E9 1401 aaKnown RBP17.1■□□□□ 0.33
SYT1-207ENST00000549559 NRKQ7Z2Y5 1582 aa17.1■□□□□ 0.33
SYT1-207ENST00000549559 SSH2Q76I76 1423 aa17.08■□□□□ 0.32
SYT1-207ENST00000549559 ARHGEF10O15013 1369 aa17.08■□□□□ 0.32
SYT1-207ENST00000549559 SPATA31A3Q5VYP0 1347 aa17.08■□□□□ 0.32
SYT1-207ENST00000549559 ABCB7O75027 752 aa17.08■□□□□ 0.32
SYT1-207ENST00000549559 PAK3O75914 559 aaPredicted RBP17.08■□□□□ 0.32
SYT1-207ENST00000549559 ALS2Q96Q42 1657 aa17.07■□□□□ 0.32
SYT1-207ENST00000549559 JCADQ9P266 1359 aa17.07■□□□□ 0.32
SYT1-207ENST00000549559 TTC21AQ8NDW8 1320 aa17.07■□□□□ 0.32
SYT1-207ENST00000549559 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
SYT1-207ENST00000549559 TTC21BQ7Z4L5 1316 aa17.06■□□□□ 0.32
SYT1-207ENST00000549559 PNPLA6Q8IY17 1366 aa17.05■□□□□ 0.32
SYT1-207ENST00000549559 ZNF316A6NFI3 1004 aaPredicted RBP17.05■□□□□ 0.32
SYT1-207ENST00000549559 ILDR1Q86SU0 546 aaPredicted RBP17.05■□□□□ 0.32
SYT1-207ENST00000549559 PANK3Q9H999 370 aa17.05■□□□□ 0.32
SYT1-207ENST00000549559 NSD3Q9BZ95 1437 aa17.04■□□□□ 0.32
SYT1-207ENST00000549559 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
SYT1-207ENST00000549559 LMOD2Q6P5Q4 547 aa17.04■□□□□ 0.32
SYT1-207ENST00000549559 COL22A1Q8NFW1 1626 aaPredicted RBP17.03■□□□□ 0.32
SYT1-207ENST00000549559 PIK3C2AO00443 1686 aa17.03■□□□□ 0.32
SYT1-207ENST00000549559 MED1Q15648 1581 aaPredicted RBP17.02■□□□□ 0.32
SYT1-207ENST00000549559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.02■□□□□ 0.32
SYT1-207ENST00000549559 ABTB2Q8N961 1025 aa17.02■□□□□ 0.32
SYT1-207ENST00000549559 CARD14Q9BXL6 1004 aa17.02■□□□□ 0.32
SYT1-207ENST00000549559 CGNL1Q0VF96 1302 aa16.99■□□□□ 0.31
SYT1-207ENST00000549559 SPATA31A6Q5VVP1 1343 aa16.99■□□□□ 0.31
SYT1-207ENST00000549559 KIF20BQ96Q89 1820 aa16.99■□□□□ 0.31
SYT1-207ENST00000549559 NLRP13Q86W25 1043 aa16.99■□□□□ 0.31
SYT1-207ENST00000549559 KNSTRNQ9Y448 316 aa16.99■□□□□ 0.31
SYT1-207ENST00000549559 USP54Q70EL1 1684 aa16.99■□□□□ 0.31
SYT1-207ENST00000549559 USP31Q70CQ4 1352 aa16.99■□□□□ 0.31
SYT1-207ENST00000549559 NLRP6P59044 892 aa16.98■□□□□ 0.31
SYT1-207ENST00000549559 NUTM2GQ5VZR2 741 aa16.98■□□□□ 0.31
SYT1-207ENST00000549559 NME9Q86XW9 330 aa16.98■□□□□ 0.31
SYT1-207ENST00000549559 USP19O94966 1318 aa16.97■□□□□ 0.31
SYT1-207ENST00000549559 ABCA3Q99758 1704 aa16.97■□□□□ 0.31
SYT1-207ENST00000549559 CRYBG1Q9Y4K1 1723 aa16.96■□□□□ 0.31
SYT1-207ENST00000549559 NSD2O96028 1365 aa16.96■□□□□ 0.31
SYT1-207ENST00000549559 PHRF1Q9P1Y6 1649 aaKnown RBP16.96■□□□□ 0.3
SYT1-207ENST00000549559 SLIT3O75094 1523 aa16.96■□□□□ 0.3
SYT1-207ENST00000549559 OVOS2A0A0J9YW53 1432 aa16.96■□□□□ 0.3
SYT1-207ENST00000549559 OVOS2Q6IE36 1432 aa16.96■□□□□ 0.3
SYT1-207ENST00000549559 FYB1O15117 783 aa16.95■□□□□ 0.3
SYT1-207ENST00000549559 HAP1P54257 671 aaPredicted RBP16.95■□□□□ 0.3
SYT1-207ENST00000549559 COG3Q96JB2 828 aa16.95■□□□□ 0.3
SYT1-207ENST00000549559 MARF1Q9Y4F3 1742 aaKnown RBP16.95■□□□□ 0.3
SYT1-207ENST00000549559 PER1O15534 1290 aaPredicted RBP16.94■□□□□ 0.3
SYT1-207ENST00000549559 DDX10Q13206 875 aaKnown RBP16.94■□□□□ 0.3
SYT1-207ENST00000549559 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
SYT1-207ENST00000549559 NUTM2BA6NNL0 878 aaPredicted RBP16.93■□□□□ 0.3
SYT1-207ENST00000549559 NUTM2EB1AL46 878 aaPredicted RBP16.93■□□□□ 0.3
SYT1-207ENST00000549559 PLEKHG5O94827 1062 aa16.93■□□□□ 0.3
SYT1-207ENST00000549559 NUTM2AQ8IVF1 878 aaPredicted RBP16.93■□□□□ 0.3
SYT1-207ENST00000549559 CABLES1Q8TDN4 633 aa16.93■□□□□ 0.3
SYT1-207ENST00000549559 GGNBP2Q9H3C7 697 aa16.93■□□□□ 0.3
SYT1-207ENST00000549559 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
SYT1-207ENST00000549559 NPC1L1Q9UHC9 1359 aa16.92■□□□□ 0.3
SYT1-207ENST00000549559 AMER1Q5JTC6 1135 aaPredicted RBP16.92■□□□□ 0.3
SYT1-207ENST00000549559 KCNH5Q8NCM2 988 aa16.92■□□□□ 0.3
SYT1-207ENST00000549559 LRP6O75581 1613 aa16.92■□□□□ 0.3
SYT1-207ENST00000549559 GCP02774 474 aa16.9■□□□□ 0.3
SYT1-207ENST00000549559 NFAT5O94916 1531 aa16.9■□□□□ 0.3
SYT1-207ENST00000549559 FOXD4L1Q9NU39 408 aa16.89■□□□□ 0.29
SYT1-207ENST00000549559 MEX3CQ5U5Q3 659 aaKnown RBP16.88■□□□□ 0.29
SYT1-207ENST00000549559 CPDO75976 1380 aa16.88■□□□□ 0.29
SYT1-207ENST00000549559 SOX12O15370 315 aa16.87■□□□□ 0.29
SYT1-207ENST00000549559 ADAMTS2O95450 1211 aa16.87■□□□□ 0.29
SYT1-207ENST00000549559 ZC3H6P61129 1189 aaKnown RBP16.86■□□□□ 0.29
SYT1-207ENST00000549559 CC2D1BQ5T0F9 858 aaKnown RBP16.86■□□□□ 0.29
SYT1-207ENST00000549559 MORC1Q86VD1 984 aa16.86■□□□□ 0.29
SYT1-207ENST00000549559 KIAA0232Q92628 1395 aa16.86■□□□□ 0.29
SYT1-207ENST00000549559 PRDM11Q9NQV5 511 aa16.85■□□□□ 0.29
SYT1-207ENST00000549559 COL14A1Q05707 1796 aaKnown RBP16.84■□□□□ 0.29
SYT1-207ENST00000549559 AATKQ6ZMQ8 1374 aa16.84■□□□□ 0.29
SYT1-207ENST00000549559 ABCC6O95255 1503 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms