RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 CABP2Q9NPB3 220 aa9.24□□□□□ -0.93
PDZRN4-204ENST00000548316 TSPOAP1O95153 1857 aa9.24□□□□□ -0.93
PDZRN4-204ENST00000548316 RGPD1P0DJD0 1748 aa9.24□□□□□ -0.93
PDZRN4-204ENST00000548316 PCDHB15Q9Y5E8 787 aa9.24□□□□□ -0.93
PDZRN4-204ENST00000548316 TECPR2O15040 1411 aa9.24□□□□□ -0.93
PDZRN4-204ENST00000548316 UBR1Q8IWV7 1749 aa9.24□□□□□ -0.93
PDZRN4-204ENST00000548316 FYB1O15117 783 aa9.24□□□□□ -0.93
PDZRN4-204ENST00000548316 PPM1GO15355 546 aaPredicted RBP9.23□□□□□ -0.93
PDZRN4-204ENST00000548316 MAPK8IP3Q9UPT6 1336 aa9.23□□□□□ -0.93
PDZRN4-204ENST00000548316 PPP6R1Q9UPN7 881 aa9.23□□□□□ -0.93
PDZRN4-204ENST00000548316 RRP7AQ9Y3A4 280 aaKnown RBP9.23□□□□□ -0.93
PDZRN4-204ENST00000548316 CFAP53Q96M91 514 aa9.22□□□□□ -0.93
PDZRN4-204ENST00000548316 COG6Q9Y2V7 657 aa9.22□□□□□ -0.93
PDZRN4-204ENST00000548316 CDK12Q9NYV4 1490 aaPredicted RBP9.22□□□□□ -0.93
PDZRN4-204ENST00000548316 TMPOP42166 694 aaKnown RBP9.21□□□□□ -0.94
PDZRN4-204ENST00000548316 RIMS1Q86UR5 1692 aaKnown RBP9.21□□□□□ -0.94
PDZRN4-204ENST00000548316 RIMS2Q9UQ26 1411 aa9.21□□□□□ -0.94
PDZRN4-204ENST00000548316 BRPF1P55201 1214 aaPredicted RBP9.21□□□□□ -0.94
PDZRN4-204ENST00000548316 NUTM2DQ5VT03 806 aaPredicted RBP9.21□□□□□ -0.94
PDZRN4-204ENST00000548316 PIK3R4Q99570 1358 aa9.2□□□□□ -0.94
PDZRN4-204ENST00000548316 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.2□□□□□ -0.94
PDZRN4-204ENST00000548316 SEC24BO95487 1268 aa9.2□□□□□ -0.94
PDZRN4-204ENST00000548316 PMFBP1Q8TBY8 1022 aa9.2□□□□□ -0.94
PDZRN4-204ENST00000548316 MYH16Q9H6N6 1097 aa9.2□□□□□ -0.94
PDZRN4-204ENST00000548316 MVPQ14764 893 aaKnown RBP9.2□□□□□ -0.94
PDZRN4-204ENST00000548316 LAS1LQ9Y4W2 734 aaKnown RBP9.2□□□□□ -0.94
PDZRN4-204ENST00000548316 USP54Q70EL1 1684 aa9.19□□□□□ -0.94
PDZRN4-204ENST00000548316 TNNT2P45379 298 aaPredicted RBP9.19□□□□□ -0.94
PDZRN4-204ENST00000548316 FBXO31Q5XUX0 539 aaPredicted RBP9.19□□□□□ -0.94
PDZRN4-204ENST00000548316 PRAM1Q96QH2 718 aa9.19□□□□□ -0.94
PDZRN4-204ENST00000548316 PEAK1Q9H792 1746 aa9.19□□□□□ -0.94
PDZRN4-204ENST00000548316 FMN2Q9NZ56 1722 aa9.19□□□□□ -0.94
PDZRN4-204ENST00000548316 AATKQ6ZMQ8 1374 aa9.18□□□□□ -0.94
PDZRN4-204ENST00000548316 PTCH1Q13635 1447 aa9.18□□□□□ -0.94
PDZRN4-204ENST00000548316 EDC4Q6P2E9 1401 aaKnown RBP9.18□□□□□ -0.94
PDZRN4-204ENST00000548316 HDAC1Q13547 482 aaPredicted RBP9.18□□□□□ -0.94
PDZRN4-204ENST00000548316 PDZRN3Q9UPQ7 1066 aa9.18□□□□□ -0.94
PDZRN4-204ENST00000548316 MARF1Q9Y4F3 1742 aaKnown RBP9.18□□□□□ -0.94
PDZRN4-204ENST00000548316 RGS3P49796 1198 aa9.18□□□□□ -0.94
PDZRN4-204ENST00000548316 NFKBIBQ15653 356 aa9.18□□□□□ -0.94
PDZRN4-204ENST00000548316 SIRT1Q96EB6 747 aa9.18□□□□□ -0.94
PDZRN4-204ENST00000548316 CDK19Q9BWU1 502 aa9.18□□□□□ -0.94
PDZRN4-204ENST00000548316 RSPH6AQ9H0K4 717 aa9.18□□□□□ -0.94
PDZRN4-204ENST00000548316 GGNBP2Q9H3C7 697 aa9.18□□□□□ -0.94
PDZRN4-204ENST00000548316 NEFMP07197 916 aa9.17□□□□□ -0.94
PDZRN4-204ENST00000548316 U2AF1L5P0DN76 240 aaPredicted RBP9.17□□□□□ -0.94
PDZRN4-204ENST00000548316 U2AF1Q01081 240 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDZRN4-204ENST00000548316 TERF2IPQ9NYB0 399 aa9.17□□□□□ -0.94
PDZRN4-204ENST00000548316 N4BP2Q86UW6 1770 aaPredicted RBP9.17□□□□□ -0.94
PDZRN4-204ENST00000548316 MINK1Q8N4C8 1332 aaPredicted RBP9.17□□□□□ -0.94
PDZRN4-204ENST00000548316 EXOSC9Q06265 439 aaKnown RBP9.16□□□□□ -0.94
PDZRN4-204ENST00000548316 ZKSCAN2Q63HK3 967 aa9.16□□□□□ -0.94
PDZRN4-204ENST00000548316 ANTXR1Q9H6X2 564 aa9.16□□□□□ -0.94
PDZRN4-204ENST00000548316 TUBGCP6Q96RT7 1819 aa9.16□□□□□ -0.94
PDZRN4-204ENST00000548316 SLC4A3P48751 1232 aa9.16□□□□□ -0.94
PDZRN4-204ENST00000548316 SSH1Q8WYL5 1049 aa9.16□□□□□ -0.94
PDZRN4-204ENST00000548316 TBC1D32Q96NH3 1257 aa9.16□□□□□ -0.94
PDZRN4-204ENST00000548316 ZNF853P0CG23 659 aa9.15□□□□□ -0.94
PDZRN4-204ENST00000548316 TRIM27P14373 513 aa9.15□□□□□ -0.94
PDZRN4-204ENST00000548316 NEUROD2Q15784 382 aa9.15□□□□□ -0.94
PDZRN4-204ENST00000548316 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.94
PDZRN4-204ENST00000548316 TSR2Q969E8 191 aaKnown RBP9.15□□□□□ -0.94
PDZRN4-204ENST00000548316 POLKQ9UBT6 870 aa9.15□□□□□ -0.94
PDZRN4-204ENST00000548316 SMC5Q8IY18 1101 aa9.15□□□□□ -0.94
PDZRN4-204ENST00000548316 DZIP1LQ8IYY4 767 aaKnown RBP9.15□□□□□ -0.94
PDZRN4-204ENST00000548316 STK26Q9P289 416 aa9.15□□□□□ -0.94
PDZRN4-204ENST00000548316 FCHSD2O94868 740 aa9.15□□□□□ -0.95
PDZRN4-204ENST00000548316 ALDH1L2Q3SY69 923 aa9.15□□□□□ -0.95
PDZRN4-204ENST00000548316 METP08581 1390 aa9.14□□□□□ -0.95
PDZRN4-204ENST00000548316 LRRC37A3O60309 1634 aa9.14□□□□□ -0.95
PDZRN4-204ENST00000548316 SRPK2P78362 688 aaKnown RBP9.14□□□□□ -0.95
PDZRN4-204ENST00000548316 ZBTB40Q9NUA8 1239 aa9.14□□□□□ -0.95
PDZRN4-204ENST00000548316 NCOA3Q9Y6Q9 1424 aa9.14□□□□□ -0.95
PDZRN4-204ENST00000548316 DIAPH1O60610 1272 aaKnown RBP9.14□□□□□ -0.95
PDZRN4-204ENST00000548316 FRAT1Q92837 279 aaPredicted RBP9.14□□□□□ -0.95
PDZRN4-204ENST00000548316 BCL2L13Q9BXK5 485 aa9.14□□□□□ -0.95
PDZRN4-204ENST00000548316 RWDD1Q9H446 243 aaPredicted RBP9.14□□□□□ -0.95
PDZRN4-204ENST00000548316 CABP1Q9NZU7 370 aa9.14□□□□□ -0.95
PDZRN4-204ENST00000548316 ADAMTS13Q76LX8 1427 aa9.13□□□□□ -0.95
PDZRN4-204ENST00000548316 IL13P35225 146 aa9.13□□□□□ -0.95
PDZRN4-204ENST00000548316 SAFB2Q14151 953 aaKnown RBP eCLIP9.13□□□□□ -0.95
PDZRN4-204ENST00000548316 ATF7IPQ6VMQ6 1270 aa9.13□□□□□ -0.95
PDZRN4-204ENST00000548316 SSH2Q76I76 1423 aa9.13□□□□□ -0.95
PDZRN4-204ENST00000548316 HDGFL2Q7Z4V5 671 aaPredicted RBP9.12□□□□□ -0.95
PDZRN4-204ENST00000548316 OVOS2A0A0J9YW53 1432 aa9.12□□□□□ -0.95
PDZRN4-204ENST00000548316 OVOS2Q6IE36 1432 aa9.12□□□□□ -0.95
PDZRN4-204ENST00000548316 ZNF428Q96B54 188 aa9.12□□□□□ -0.95
PDZRN4-204ENST00000548316 CANXP27824 592 aaKnown RBP9.11□□□□□ -0.95
PDZRN4-204ENST00000548316 RIPK4P57078 832 aa9.11□□□□□ -0.95
PDZRN4-204ENST00000548316 NFE2L2Q16236 605 aa9.11□□□□□ -0.95
PDZRN4-204ENST00000548316 NOB1Q9ULX3 412 aaKnown RBP9.11□□□□□ -0.95
PDZRN4-204ENST00000548316 RGS12O14924 1447 aa9.11□□□□□ -0.95
PDZRN4-204ENST00000548316 XRN1Q8IZH2 1706 aaKnown RBP9.11□□□□□ -0.95
PDZRN4-204ENST00000548316 WASLO00401 505 aaPredicted RBP9.11□□□□□ -0.95
PDZRN4-204ENST00000548316 WAPLQ7Z5K2 1190 aa9.11□□□□□ -0.95
PDZRN4-204ENST00000548316 TMEM57Q8N5G2 664 aa9.11□□□□□ -0.95
PDZRN4-204ENST00000548316 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
PDZRN4-204ENST00000548316 POGKQ9P215 609 aa9.11□□□□□ -0.95
PDZRN4-204ENST00000548316 DDX19BQ9UMR2 479 aa9.11□□□□□ -0.95
PDZRN4-204ENST00000548316 RGPD8O14715 1765 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms