RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 STAG3Q9UJ98 1225 aa20.6■□□□□ 0.89
CNOT2-209ENST00000548159 NLRP1Q9C000 1473 aa20.6■□□□□ 0.89
CNOT2-209ENST00000548159 NCBP3Q53F19 620 aaKnown RBP20.59■□□□□ 0.89
CNOT2-209ENST00000548159 MVPQ14764 893 aaKnown RBP20.59■□□□□ 0.89
CNOT2-209ENST00000548159 ZKSCAN2Q63HK3 967 aa20.59■□□□□ 0.89
CNOT2-209ENST00000548159 WAPLQ7Z5K2 1190 aa20.59■□□□□ 0.89
CNOT2-209ENST00000548159 SSH1Q8WYL5 1049 aa20.58■□□□□ 0.88
CNOT2-209ENST00000548159 SMC4Q9NTJ3 1288 aa20.58■□□□□ 0.88
CNOT2-209ENST00000548159 RIPK4P57078 832 aa20.57■□□□□ 0.88
CNOT2-209ENST00000548159 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.57■□□□□ 0.882e-6■■□□□ 13
CNOT2-209ENST00000548159 DZIP1LQ8IYY4 767 aaKnown RBP20.57■□□□□ 0.88
CNOT2-209ENST00000548159 FTSJ3Q8IY81 847 aaKnown RBP20.57■□□□□ 0.88
CNOT2-209ENST00000548159 DIAPH1O60610 1272 aaKnown RBP20.56■□□□□ 0.88
CNOT2-209ENST00000548159 TRIM27P14373 513 aa20.56■□□□□ 0.88
CNOT2-209ENST00000548159 ALKQ9UM73 1620 aa20.56■□□□□ 0.88
CNOT2-209ENST00000548159 HDGFL2Q7Z4V5 671 aaPredicted RBP20.56■□□□□ 0.88
CNOT2-209ENST00000548159 AAMPQ13685 434 aa20.55■□□□□ 0.88
CNOT2-209ENST00000548159 FAM69CQ0P6D2 419 aa20.55■□□□□ 0.88
CNOT2-209ENST00000548159 RWDD1Q9H446 243 aaPredicted RBP20.55■□□□□ 0.88
CNOT2-209ENST00000548159 ARHGEF40Q8TER5 1519 aa20.54■□□□□ 0.88
CNOT2-209ENST00000548159 VIRMAQ69YN4 1812 aaKnown RBP20.54■□□□□ 0.88
CNOT2-209ENST00000548159 NOB1Q9ULX3 412 aaKnown RBP20.52■□□□□ 0.88
CNOT2-209ENST00000548159 FRAT2O75474 233 aaPredicted RBP20.52■□□□□ 0.87
CNOT2-209ENST00000548159 MLECQ14165 292 aa20.52■□□□□ 0.87
CNOT2-209ENST00000548159 PNPLA6Q8IY17 1366 aa20.51■□□□□ 0.87
CNOT2-209ENST00000548159 CT47B1P0C2W7 299 aaPredicted RBP20.51■□□□□ 0.87
CNOT2-209ENST00000548159 MED14O60244 1454 aa20.51■□□□□ 0.87
CNOT2-209ENST00000548159 CLTCQ00610 1675 aaKnown RBP20.51■□□□□ 0.87
CNOT2-209ENST00000548159 ITPRIPQ8IWB1 547 aa20.5■□□□□ 0.87
CNOT2-209ENST00000548159 POLKQ9UBT6 870 aa20.5■□□□□ 0.87
CNOT2-209ENST00000548159 ATF7IPQ6VMQ6 1270 aa20.5■□□□□ 0.87
CNOT2-209ENST00000548159 ANKRD26Q9UPS8 1709 aa20.49■□□□□ 0.87
CNOT2-209ENST00000548159 PRKAR2BP31323 418 aa20.48■□□□□ 0.87
CNOT2-209ENST00000548159 HMOX1P09601 288 aa20.48■□□□□ 0.87
CNOT2-209ENST00000548159 TMEM57Q8N5G2 664 aa20.48■□□□□ 0.87
CNOT2-209ENST00000548159 PHACTR3Q96KR7 559 aa20.47■□□□□ 0.87
CNOT2-209ENST00000548159 IL16Q14005 1332 aa20.47■□□□□ 0.87
CNOT2-209ENST00000548159 RSPH6AQ9H0K4 717 aa20.47■□□□□ 0.87
CNOT2-209ENST00000548159 THUMPD2Q9BTF0 503 aaKnown RBP20.46■□□□□ 0.87
CNOT2-209ENST00000548159 ZRANB1Q9UGI0 708 aa20.46■□□□□ 0.87
CNOT2-209ENST00000548159 FCHSD2O94868 740 aa20.46■□□□□ 0.87
CNOT2-209ENST00000548159 GSE1Q14687 1217 aa20.46■□□□□ 0.87
CNOT2-209ENST00000548159 NCKAP5LQ9HCH0 1330 aa20.45■□□□□ 0.86
CNOT2-209ENST00000548159 EMILIN1Q9Y6C2 1016 aa20.45■□□□□ 0.86
CNOT2-209ENST00000548159 A2ML1A8K2U0 1454 aa20.45■□□□□ 0.86
CNOT2-209ENST00000548159 IL27Q8NEV9 243 aa20.45■□□□□ 0.86
CNOT2-209ENST00000548159 DDX19BQ9UMR2 479 aa20.45■□□□□ 0.86
CNOT2-209ENST00000548159 TSPOAP1O95153 1857 aa20.44■□□□□ 0.86
CNOT2-209ENST00000548159 SLKQ9H2G2 1235 aaPredicted RBP20.44■□□□□ 0.86
CNOT2-209ENST00000548159 LRRC7Q96NW7 1537 aa20.43■□□□□ 0.86
CNOT2-209ENST00000548159 NME9Q86XW9 330 aa20.43■□□□□ 0.86
CNOT2-209ENST00000548159 TBC1D32Q96NH3 1257 aa20.43■□□□□ 0.86
CNOT2-209ENST00000548159 RIMS2Q9UQ26 1411 aa20.43■□□□□ 0.86
CNOT2-209ENST00000548159 ZBTB40Q9NUA8 1239 aa20.42■□□□□ 0.86
CNOT2-209ENST00000548159 KIF20BQ96Q89 1820 aa20.42■□□□□ 0.86
CNOT2-209ENST00000548159 HDAC1Q13547 482 aaPredicted RBP20.42■□□□□ 0.86
CNOT2-209ENST00000548159 TXNDC2Q86VQ3 553 aa20.42■□□□□ 0.86
CNOT2-209ENST00000548159 PNNQ9H307 717 aaKnown RBP20.42■□□□□ 0.86
CNOT2-209ENST00000548159 UPF2Q9HAU5 1272 aaKnown RBP20.4■□□□□ 0.86
CNOT2-209ENST00000548159 FAM135BQ49AJ0 1406 aa20.4■□□□□ 0.86
CNOT2-209ENST00000548159 METP08581 1390 aa20.39■□□□□ 0.85
CNOT2-209ENST00000548159 MAP2P11137 1827 aaKnown RBP20.39■□□□□ 0.85
CNOT2-209ENST00000548159 TSPYL6Q8N831 410 aa20.39■□□□□ 0.85
CNOT2-209ENST00000548159 ZMYM3Q14202 1370 aa20.39■□□□□ 0.85
CNOT2-209ENST00000548159 WASLO00401 505 aaPredicted RBP20.38■□□□□ 0.85
CNOT2-209ENST00000548159 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
CNOT2-209ENST00000548159 BECN1Q14457 450 aa20.38■□□□□ 0.85
CNOT2-209ENST00000548159 SMC5Q8IY18 1101 aa20.38■□□□□ 0.85
CNOT2-209ENST00000548159 KIF16BQ96L93 1317 aa20.38■□□□□ 0.85
CNOT2-209ENST00000548159 TBC1D2Q9BYX2 928 aa20.37■□□□□ 0.85
CNOT2-209ENST00000548159 ATP7BP35670 1465 aa20.37■□□□□ 0.85
CNOT2-209ENST00000548159 IPO8O15397 1037 aaKnown RBP20.37■□□□□ 0.85
CNOT2-209ENST00000548159 RRS1Q15050 365 aaKnown RBP20.37■□□□□ 0.85
CNOT2-209ENST00000548159 NFE2L2Q16236 605 aa20.37■□□□□ 0.85
CNOT2-209ENST00000548159 PPIP5K1Q6PFW1 1433 aa20.37■□□□□ 0.85
CNOT2-209ENST00000548159 IL13P35225 146 aa20.36■□□□□ 0.85
CNOT2-209ENST00000548159 ALDH1L2Q3SY69 923 aa20.36■□□□□ 0.85
CNOT2-209ENST00000548159 DLC1Q96QB1 1528 aa20.36■□□□□ 0.85
CNOT2-209ENST00000548159 DIP2BQ9P265 1576 aa20.36■□□□□ 0.85
CNOT2-209ENST00000548159 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
CNOT2-209ENST00000548159 VAMP4O75379 141 aa20.35■□□□□ 0.85
CNOT2-209ENST00000548159 MFAP1P55081 439 aaKnown RBP20.35■□□□□ 0.85
CNOT2-209ENST00000548159 NUDT16Q96DE0 195 aaKnown RBP20.35■□□□□ 0.85
CNOT2-209ENST00000548159 PPP6R1Q9UPN7 881 aa20.35■□□□□ 0.85
CNOT2-209ENST00000548159 CPSF1Q10570 1443 aaKnown RBP20.35■□□□□ 0.85
CNOT2-209ENST00000548159 CDC42BPGQ6DT37 1551 aa20.35■□□□□ 0.85
CNOT2-209ENST00000548159 RIMBP3CA6NJZ7 1639 aa20.35■□□□□ 0.85
CNOT2-209ENST00000548159 RIMBP3BA6NNM3 1639 aa20.35■□□□□ 0.85
CNOT2-209ENST00000548159 RIMBP3Q9UFD9 1639 aa20.35■□□□□ 0.85
CNOT2-209ENST00000548159 SPATA31D1Q6ZQQ2 1576 aa20.34■□□□□ 0.85
CNOT2-209ENST00000548159 SPRYD3Q8NCJ5 442 aa20.34■□□□□ 0.85
CNOT2-209ENST00000548159 ANTXR1Q9H6X2 564 aa20.34■□□□□ 0.85
CNOT2-209ENST00000548159 RTN4Q9NQC3 1192 aaKnown RBP20.33■□□□□ 0.85
CNOT2-209ENST00000548159 LNPKQ9C0E8 428 aa20.33■□□□□ 0.84
CNOT2-209ENST00000548159 BRPF3Q9ULD4 1205 aa20.33■□□□□ 0.84
CNOT2-209ENST00000548159 AGLP35573 1532 aa20.33■□□□□ 0.84
CNOT2-209ENST00000548159 FAM83GA6ND36 823 aa20.32■□□□□ 0.84
CNOT2-209ENST00000548159 C1orf115Q9H7X2 142 aa20.32■□□□□ 0.84
CNOT2-209ENST00000548159 MBIPQ9NS73 344 aa20.32■□□□□ 0.84
CNOT2-209ENST00000548159 EDC4Q6P2E9 1401 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms