RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CABLES1Q8TDN4 633 aa9.74□□□□□ -0.85
SCAF11-211ENST00000547950 ZRANB1Q9UGI0 708 aa9.74□□□□□ -0.85
SCAF11-211ENST00000547950 TRPC5Q9UL62 973 aaPredicted RBP9.74□□□□□ -0.85
SCAF11-211ENST00000547950 SPATA31A3Q5VYP0 1347 aa9.74□□□□□ -0.85
SCAF11-211ENST00000547950 NHSL1Q5SYE7 1610 aa9.74□□□□□ -0.85
SCAF11-211ENST00000547950 CDC42BPGQ6DT37 1551 aa9.73□□□□□ -0.85
SCAF11-211ENST00000547950 PXDNQ92626 1479 aa9.72□□□□□ -0.85
SCAF11-211ENST00000547950 WASLO00401 505 aaPredicted RBP9.72□□□□□ -0.85
SCAF11-211ENST00000547950 NBPF1Q3BBV0 1214 aa9.7□□□□□ -0.86
SCAF11-211ENST00000547950 NGDNQ8NEJ9 315 aaKnown RBP9.7□□□□□ -0.86
SCAF11-211ENST00000547950 PAK3O75914 559 aaPredicted RBP9.69□□□□□ -0.86
SCAF11-211ENST00000547950 NEUROD1Q13562 356 aa9.69□□□□□ -0.86
SCAF11-211ENST00000547950 UNC5CLQ8IV45 518 aa9.69□□□□□ -0.86
SCAF11-211ENST00000547950 GJD4Q96KN9 370 aaPredicted RBP9.69□□□□□ -0.86
SCAF11-211ENST00000547950 CDK19Q9BWU1 502 aa9.69□□□□□ -0.86
SCAF11-211ENST00000547950 PRR36Q9H6K5 1346 aa9.69□□□□□ -0.86
SCAF11-211ENST00000547950 IFT172Q9UG01 1749 aa9.69□□□□□ -0.86
SCAF11-211ENST00000547950 LAMC1P11047 1609 aa9.68□□□□□ -0.86
SCAF11-211ENST00000547950 BCL9LQ86UU0 1499 aa9.68□□□□□ -0.86
SCAF11-211ENST00000547950 CDK12Q9NYV4 1490 aaPredicted RBP9.68□□□□□ -0.86
SCAF11-211ENST00000547950 RGS12O14924 1447 aa9.68□□□□□ -0.86
SCAF11-211ENST00000547950 SBNO1A3KN83 1393 aa9.68□□□□□ -0.86
SCAF11-211ENST00000547950 GPRASP1Q5JY77 1395 aa9.68□□□□□ -0.86
SCAF11-211ENST00000547950 PROM2Q8N271 834 aa9.68□□□□□ -0.86
SCAF11-211ENST00000547950 NUDT16Q96DE0 195 aaKnown RBP9.68□□□□□ -0.86
SCAF11-211ENST00000547950 SIN3AQ96ST3 1273 aa9.68□□□□□ -0.86
SCAF11-211ENST00000547950 CCDC9Q9Y3X0 531 aaKnown RBP9.68□□□□□ -0.86
SCAF11-211ENST00000547950 ADGRB1O14514 1584 aa9.67□□□□□ -0.86
SCAF11-211ENST00000547950 DLC1Q96QB1 1528 aa9.67□□□□□ -0.86
SCAF11-211ENST00000547950 FAM83GA6ND36 823 aa9.67□□□□□ -0.86
SCAF11-211ENST00000547950 L3MBTL2Q969R5 705 aa9.67□□□□□ -0.86
SCAF11-211ENST00000547950 ATRNO75882 1429 aa9.66□□□□□ -0.86
SCAF11-211ENST00000547950 TNS3Q68CZ2 1445 aa9.66□□□□□ -0.86
SCAF11-211ENST00000547950 ANKARQ7Z5J8 1434 aa9.66□□□□□ -0.86
SCAF11-211ENST00000547950 ARHGEF10O15013 1369 aa9.66□□□□□ -0.86
SCAF11-211ENST00000547950 ZNF579Q8NAF0 562 aaKnown RBP9.66□□□□□ -0.86
SCAF11-211ENST00000547950 KNDC1Q76NI1 1749 aa9.65□□□□□ -0.86
SCAF11-211ENST00000547950 EIF3AQ14152 1382 aaKnown RBP9.65□□□□□ -0.86
SCAF11-211ENST00000547950 FMN2Q9NZ56 1722 aa9.65□□□□□ -0.87
SCAF11-211ENST00000547950 ATAD2Q6PL18 1390 aa9.64□□□□□ -0.87
SCAF11-211ENST00000547950 MNX1P50219 401 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-211ENST00000547950 SRPK2P78362 688 aaKnown RBP9.64□□□□□ -0.87
SCAF11-211ENST00000547950 NBPF8Q3BBV2 869 aa9.64□□□□□ -0.87
SCAF11-211ENST00000547950 NUTM2GQ5VZR2 741 aa9.64□□□□□ -0.87
SCAF11-211ENST00000547950 CCDC61Q9Y6R9 512 aa9.64□□□□□ -0.87
SCAF11-211ENST00000547950 COL22A1Q8NFW1 1626 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-211ENST00000547950 A0A0G2JS52 829 aa9.63□□□□□ -0.87
SCAF11-211ENST00000547950 CLCN6P51797 869 aa9.63□□□□□ -0.87
SCAF11-211ENST00000547950 MYT1Q01538 1121 aa9.63□□□□□ -0.87
SCAF11-211ENST00000547950 VPS72Q15906 364 aa9.63□□□□□ -0.87
SCAF11-211ENST00000547950 SEPT12Q8IYM1 358 aa9.63□□□□□ -0.87
SCAF11-211ENST00000547950 DCBLD2Q96PD2 775 aa9.63□□□□□ -0.87
SCAF11-211ENST00000547950 CABP2Q9NPB3 220 aa9.63□□□□□ -0.87
SCAF11-211ENST00000547950 BTG4Q9NY30 223 aa9.63□□□□□ -0.87
SCAF11-211ENST00000547950 ACEP12821 1306 aa9.62□□□□□ -0.87
SCAF11-211ENST00000547950 POTEIP0CG38 1075 aa9.62□□□□□ -0.87
SCAF11-211ENST00000547950 SLIT2O94813 1529 aa9.61□□□□□ -0.87
SCAF11-211ENST00000547950 KIF1AQ12756 1690 aa9.61□□□□□ -0.87
SCAF11-211ENST00000547950 CENPJQ9HC77 1338 aaPredicted RBP9.61□□□□□ -0.87
SCAF11-211ENST00000547950 RALGAPBQ86X10 1494 aa9.61□□□□□ -0.87
SCAF11-211ENST00000547950 PLEKHG3A1L390 1219 aa9.61□□□□□ -0.87
SCAF11-211ENST00000547950 ZC3H6P61129 1189 aaKnown RBP9.61□□□□□ -0.87
SCAF11-211ENST00000547950 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
SCAF11-211ENST00000547950 PHF12Q96QT6 1004 aa9.61□□□□□ -0.87
SCAF11-211ENST00000547950 PRDM11Q9NQV5 511 aa9.61□□□□□ -0.87
SCAF11-211ENST00000547950 TULP4Q9NRJ4 1543 aa9.61□□□□□ -0.87
SCAF11-211ENST00000547950 ONECUT3O60422 494 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-211ENST00000547950 FAM98CQ17RN3 349 aaKnown RBP9.6□□□□□ -0.87
SCAF11-211ENST00000547950 CCDC125Q86Z20 511 aa9.6□□□□□ -0.87
SCAF11-211ENST00000547950 ABTB2Q8N961 1025 aa9.6□□□□□ -0.87
SCAF11-211ENST00000547950 CABP1Q9NZU7 370 aa9.6□□□□□ -0.87
SCAF11-211ENST00000547950 KRT27Q7Z3Y8 459 aa9.59□□□□□ -0.87
SCAF11-211ENST00000547950 MIER1Q8N108 512 aa9.59□□□□□ -0.87
SCAF11-211ENST00000547950 STRN4Q9NRL3 753 aa9.59□□□□□ -0.87
SCAF11-211ENST00000547950 USP32Q8NFA0 1604 aa9.59□□□□□ -0.87
SCAF11-211ENST00000547950 ADGRB2O60241 1585 aa9.58□□□□□ -0.88
SCAF11-211ENST00000547950 GALR2O43603 387 aaPredicted RBP9.58□□□□□ -0.88
SCAF11-211ENST00000547950 EVA1CP58658 441 aa9.58□□□□□ -0.88
SCAF11-211ENST00000547950 FKBP8Q14318 412 aa9.58□□□□□ -0.88
SCAF11-211ENST00000547950 LHX8Q68G74 356 aa9.58□□□□□ -0.88
SCAF11-211ENST00000547950 SF3B2Q13435 895 aaKnown RBP9.57□□□□□ -0.88
SCAF11-211ENST00000547950 USP35Q9P2H5 1018 aa9.57□□□□□ -0.88
SCAF11-211ENST00000547950 POLR3AO14802 1390 aaPredicted RBP9.57□□□□□ -0.88
SCAF11-211ENST00000547950 KIAA0232Q92628 1395 aa9.57□□□□□ -0.88
SCAF11-211ENST00000547950 ATP7BP35670 1465 aa9.57□□□□□ -0.88
SCAF11-211ENST00000547950 RGPD8O14715 1765 aaPredicted RBP9.57□□□□□ -0.88
SCAF11-211ENST00000547950 EVC2Q86UK5 1308 aa9.56□□□□□ -0.88
SCAF11-211ENST00000547950 PPIP5K1Q6PFW1 1433 aa9.56□□□□□ -0.88
SCAF11-211ENST00000547950 ROCK2O75116 1388 aaKnown RBP9.56□□□□□ -0.88
SCAF11-211ENST00000547950 ZBTB7CA1YPR0 619 aa9.56□□□□□ -0.88
SCAF11-211ENST00000547950 FAM182BQ5T319 152 aa9.56□□□□□ -0.88
SCAF11-211ENST00000547950 DEFB132Q7Z7B7 95 aa9.56□□□□□ -0.88
SCAF11-211ENST00000547950 NLRP13Q86W25 1043 aa9.56□□□□□ -0.88
SCAF11-211ENST00000547950 TSPYL2Q9H2G4 693 aaPredicted RBP9.56□□□□□ -0.88
SCAF11-211ENST00000547950 SPATA31A5Q5VU36 1347 aa9.56□□□□□ -0.88
SCAF11-211ENST00000547950 SPATA31A7Q8IWB4 1347 aa9.56□□□□□ -0.88
SCAF11-211ENST00000547950 GCP02774 474 aa9.55□□□□□ -0.88
SCAF11-211ENST00000547950 NLRP6P59044 892 aa9.55□□□□□ -0.88
SCAF11-211ENST00000547950 GLI3P10071 1580 aa9.54□□□□□ -0.88
SCAF11-211ENST00000547950 TRIM26Q12899 539 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms