RNA–Protein interactions for RNA: ENST00000547752.5

PTPRR-206, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,729 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-206ENST00000547752 USP6P35125 1406 aa13.36□□□□□ -0.27
PTPRR-206ENST00000547752 AKAP12Q02952 1782 aa13.36□□□□□ -0.27
PTPRR-206ENST00000547752 ILDR1Q86SU0 546 aaPredicted RBP13.36□□□□□ -0.27
PTPRR-206ENST00000547752 ZNF692Q9BU19 519 aaPredicted RBP13.36□□□□□ -0.27
PTPRR-206ENST00000547752 TRPM3Q9HCF6 1732 aaPredicted RBP13.35□□□□□ -0.27
PTPRR-206ENST00000547752 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
PTPRR-206ENST00000547752 ANKRD36BQ8N2N9 1353 aa13.35□□□□□ -0.27
PTPRR-206ENST00000547752 HDGFL2Q7Z4V5 671 aaPredicted RBP13.35□□□□□ -0.27
PTPRR-206ENST00000547752 CARD14Q9BXL6 1004 aa13.35□□□□□ -0.27
PTPRR-206ENST00000547752 TERF2IPQ9NYB0 399 aa13.35□□□□□ -0.27
PTPRR-206ENST00000547752 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
PTPRR-206ENST00000547752 SPATA31A3Q5VYP0 1347 aa13.34□□□□□ -0.27
PTPRR-206ENST00000547752 TTC21BQ7Z4L5 1316 aa13.34□□□□□ -0.27
PTPRR-206ENST00000547752 PANK3Q9H999 370 aa13.33□□□□□ -0.27
PTPRR-206ENST00000547752 ZNF316A6NFI3 1004 aaPredicted RBP13.33□□□□□ -0.28
PTPRR-206ENST00000547752 LRRC59Q96AG4 307 aaKnown RBP13.33□□□□□ -0.28
PTPRR-206ENST00000547752 MON2Q7Z3U7 1717 aa13.32□□□□□ -0.28
PTPRR-206ENST00000547752 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
PTPRR-206ENST00000547752 TNS3Q68CZ2 1445 aa13.32□□□□□ -0.28
PTPRR-206ENST00000547752 NRKQ7Z2Y5 1582 aa13.31□□□□□ -0.28
PTPRR-206ENST00000547752 PAK3O75914 559 aaPredicted RBP13.31□□□□□ -0.28
PTPRR-206ENST00000547752 PNPLA6Q8IY17 1366 aa13.31□□□□□ -0.28
PTPRR-206ENST00000547752 ALS2Q96Q42 1657 aa13.31□□□□□ -0.28
PTPRR-206ENST00000547752 EDC4Q6P2E9 1401 aaKnown RBP13.31□□□□□ -0.28
PTPRR-206ENST00000547752 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.3□□□□□ -0.28
PTPRR-206ENST00000547752 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
PTPRR-206ENST00000547752 TTC21AQ8NDW8 1320 aa13.29□□□□□ -0.28
PTPRR-206ENST00000547752 NSD3Q9BZ95 1437 aa13.29□□□□□ -0.28
PTPRR-206ENST00000547752 NUTM2GQ5VZR2 741 aa13.29□□□□□ -0.28
PTPRR-206ENST00000547752 NME9Q86XW9 330 aa13.29□□□□□ -0.28
PTPRR-206ENST00000547752 JCADQ9P266 1359 aa13.29□□□□□ -0.28
PTPRR-206ENST00000547752 PER1O15534 1290 aaPredicted RBP13.28□□□□□ -0.28
PTPRR-206ENST00000547752 LMOD2Q6P5Q4 547 aa13.28□□□□□ -0.28
PTPRR-206ENST00000547752 ARHGEF10O15013 1369 aa13.28□□□□□ -0.28
PTPRR-206ENST00000547752 ABTB2Q8N961 1025 aa13.27□□□□□ -0.28
PTPRR-206ENST00000547752 PIK3C2AO00443 1686 aa13.27□□□□□ -0.28
PTPRR-206ENST00000547752 FYB1O15117 783 aa13.27□□□□□ -0.29
PTPRR-206ENST00000547752 SHPRHQ149N8 1683 aa13.27□□□□□ -0.29
PTPRR-206ENST00000547752 COL22A1Q8NFW1 1626 aaPredicted RBP13.26□□□□□ -0.29
PTPRR-206ENST00000547752 USP31Q70CQ4 1352 aa13.26□□□□□ -0.29
PTPRR-206ENST00000547752 DDX10Q13206 875 aaKnown RBP13.26□□□□□ -0.29
PTPRR-206ENST00000547752 CABLES1Q8TDN4 633 aa13.26□□□□□ -0.29
PTPRR-206ENST00000547752 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
PTPRR-206ENST00000547752 MED1Q15648 1581 aaPredicted RBP13.26□□□□□ -0.29
PTPRR-206ENST00000547752 NLRP6P59044 892 aa13.25□□□□□ -0.29
PTPRR-206ENST00000547752 USP19O94966 1318 aa13.25□□□□□ -0.29
PTPRR-206ENST00000547752 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
PTPRR-206ENST00000547752 MARF1Q9Y4F3 1742 aaKnown RBP13.24□□□□□ -0.29
PTPRR-206ENST00000547752 AMER1Q5JTC6 1135 aaPredicted RBP13.24□□□□□ -0.29
PTPRR-206ENST00000547752 NLRP13Q86W25 1043 aa13.24□□□□□ -0.29
PTPRR-206ENST00000547752 GGNBP2Q9H3C7 697 aa13.24□□□□□ -0.29
PTPRR-206ENST00000547752 OVOS2A0A0J9YW53 1432 aa13.23□□□□□ -0.29
PTPRR-206ENST00000547752 OVOS2Q6IE36 1432 aa13.23□□□□□ -0.29
PTPRR-206ENST00000547752 CRYBG1Q9Y4K1 1723 aa13.23□□□□□ -0.29
PTPRR-206ENST00000547752 KNSTRNQ9Y448 316 aa13.23□□□□□ -0.29
PTPRR-206ENST00000547752 CGNL1Q0VF96 1302 aa13.23□□□□□ -0.29
PTPRR-206ENST00000547752 NUTM2BA6NNL0 878 aaPredicted RBP13.22□□□□□ -0.29
PTPRR-206ENST00000547752 NUTM2EB1AL46 878 aaPredicted RBP13.22□□□□□ -0.29
PTPRR-206ENST00000547752 NUTM2AQ8IVF1 878 aaPredicted RBP13.22□□□□□ -0.29
PTPRR-206ENST00000547752 LRP6O75581 1613 aa13.22□□□□□ -0.29
PTPRR-206ENST00000547752 SPATA31A6Q5VVP1 1343 aa13.22□□□□□ -0.29
PTPRR-206ENST00000547752 USP54Q70EL1 1684 aa13.22□□□□□ -0.29
PTPRR-206ENST00000547752 SLIT3O75094 1523 aa13.22□□□□□ -0.29
PTPRR-206ENST00000547752 ABCA3Q99758 1704 aa13.21□□□□□ -0.29
PTPRR-206ENST00000547752 KIF20BQ96Q89 1820 aa13.2□□□□□ -0.3
PTPRR-206ENST00000547752 GCP02774 474 aa13.2□□□□□ -0.3
PTPRR-206ENST00000547752 COG3Q96JB2 828 aa13.2□□□□□ -0.3
PTPRR-206ENST00000547752 PHRF1Q9P1Y6 1649 aaKnown RBP13.2□□□□□ -0.3
PTPRR-206ENST00000547752 FBLN1P23142 703 aa13.19□□□□□ -0.3
PTPRR-206ENST00000547752 NSD2O96028 1365 aa13.19□□□□□ -0.3
PTPRR-206ENST00000547752 NPC1L1Q9UHC9 1359 aa13.19□□□□□ -0.3
PTPRR-206ENST00000547752 NFAT5O94916 1531 aa13.18□□□□□ -0.3
PTPRR-206ENST00000547752 ADAMTS2O95450 1211 aa13.18□□□□□ -0.3
PTPRR-206ENST00000547752 CC2D1BQ5T0F9 858 aaKnown RBP13.18□□□□□ -0.3
PTPRR-206ENST00000547752 SOX12O15370 315 aa13.17□□□□□ -0.3
PTPRR-206ENST00000547752 ZC3H6P61129 1189 aaKnown RBP13.17□□□□□ -0.3
PTPRR-206ENST00000547752 HAP1P54257 671 aaPredicted RBP13.16□□□□□ -0.3
PTPRR-206ENST00000547752 KCNH5Q8NCM2 988 aa13.16□□□□□ -0.3
PTPRR-206ENST00000547752 KIAA0232Q92628 1395 aa13.16□□□□□ -0.3
PTPRR-206ENST00000547752 FAM83GA6ND36 823 aa13.16□□□□□ -0.3
PTPRR-206ENST00000547752 CNGB1Q14028 1251 aaPredicted RBP13.16□□□□□ -0.3
PTPRR-206ENST00000547752 MORC1Q86VD1 984 aa13.16□□□□□ -0.3
PTPRR-206ENST00000547752 ARHGEF25Q86VW2 580 aa13.16□□□□□ -0.3
PTPRR-206ENST00000547752 ANKRD26Q9UPS8 1709 aa13.16□□□□□ -0.3
PTPRR-206ENST00000547752 CPDO75976 1380 aa13.15□□□□□ -0.3
PTPRR-206ENST00000547752 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
PTPRR-206ENST00000547752 CHRNA2Q15822 529 aa13.14□□□□□ -0.31
PTPRR-206ENST00000547752 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
PTPRR-206ENST00000547752 RRS1Q15050 365 aaKnown RBP13.13□□□□□ -0.31
PTPRR-206ENST00000547752 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
PTPRR-206ENST00000547752 MEX3CQ5U5Q3 659 aaKnown RBP13.13□□□□□ -0.31
PTPRR-206ENST00000547752 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
PTPRR-206ENST00000547752 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
PTPRR-206ENST00000547752 PRDM11Q9NQV5 511 aa13.13□□□□□ -0.31
PTPRR-206ENST00000547752 AATKQ6ZMQ8 1374 aa13.12□□□□□ -0.31
PTPRR-206ENST00000547752 ZBTB7CA1YPR0 619 aa13.12□□□□□ -0.31
PTPRR-206ENST00000547752 COL18A1P39060 1754 aa13.11□□□□□ -0.31
PTPRR-206ENST00000547752 NGLY1Q96IV0 654 aa13.11□□□□□ -0.31
PTPRR-206ENST00000547752 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
PTPRR-206ENST00000547752 AXIN2Q9Y2T1 843 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms