RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 CLUAP1Q96AJ1 413 aa20.05■□□□□ 0.8
BRF1-212ENST00000547562 ZMYM3Q14202 1370 aa20.04■□□□□ 0.8
BRF1-212ENST00000547562 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.04■□□□□ 0.8
BRF1-212ENST00000547562 TMPOP42166 694 aaKnown RBP20.03■□□□□ 0.8
BRF1-212ENST00000547562 ESF1Q9H501 851 aaKnown RBP20.03■□□□□ 0.8
BRF1-212ENST00000547562 MAPK8IP3Q9UPT6 1336 aa20.02■□□□□ 0.8
BRF1-212ENST00000547562 DIAPH1O60610 1272 aaKnown RBP20.02■□□□□ 0.8
BRF1-212ENST00000547562 IGHDP01880 384 aa20.02■□□□□ 0.8
BRF1-212ENST00000547562 KNDC1Q76NI1 1749 aa20.02■□□□□ 0.8
BRF1-212ENST00000547562 FAM161AQ3B820 660 aa20.02■□□□□ 0.79
BRF1-212ENST00000547562 CDC42BPGQ6DT37 1551 aa20.01■□□□□ 0.79
BRF1-212ENST00000547562 METP08581 1390 aa20.01■□□□□ 0.79
BRF1-212ENST00000547562 AAMPQ13685 434 aa20.01■□□□□ 0.79
BRF1-212ENST00000547562 TRIM35Q9UPQ4 493 aa20.01■□□□□ 0.79
BRF1-212ENST00000547562 MAP2P11137 1827 aaKnown RBP20■□□□□ 0.79
BRF1-212ENST00000547562 CT47B1P0C2W7 299 aaPredicted RBP20■□□□□ 0.79
BRF1-212ENST00000547562 BCL2L13Q9BXK5 485 aa20■□□□□ 0.79
BRF1-212ENST00000547562 RGS3P49796 1198 aa20■□□□□ 0.79
BRF1-212ENST00000547562 C8orf34Q49A92 452 aa20■□□□□ 0.79
BRF1-212ENST00000547562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20■□□□□ 0.79
BRF1-212ENST00000547562 RLBP1P12271 317 aa19.98■□□□□ 0.79
BRF1-212ENST00000547562 PNNQ9H307 717 aaKnown RBP19.98■□□□□ 0.79
BRF1-212ENST00000547562 WASLO00401 505 aaPredicted RBP19.98■□□□□ 0.79
BRF1-212ENST00000547562 CPSF1Q10570 1443 aaKnown RBP19.98■□□□□ 0.79
BRF1-212ENST00000547562 IL16Q14005 1332 aa19.97■□□□□ 0.79
BRF1-212ENST00000547562 VIRMAQ69YN4 1812 aaKnown RBP19.97■□□□□ 0.79
BRF1-212ENST00000547562 PPIP5K1Q6PFW1 1433 aa19.97■□□□□ 0.79
BRF1-212ENST00000547562 TSR2Q969E8 191 aaKnown RBP19.97■□□□□ 0.79
BRF1-212ENST00000547562 TECPR2O15040 1411 aa19.97■□□□□ 0.79
BRF1-212ENST00000547562 FAM135BQ49AJ0 1406 aa19.97■□□□□ 0.79
BRF1-212ENST00000547562 EDC4Q6P2E9 1401 aaKnown RBP19.97■□□□□ 0.79
BRF1-212ENST00000547562 TNNQ9UQP3 1299 aa19.96■□□□□ 0.79
BRF1-212ENST00000547562 LRRC7Q96NW7 1537 aa19.96■□□□□ 0.79
BRF1-212ENST00000547562 TNRQ92752 1358 aa19.96■□□□□ 0.79
BRF1-212ENST00000547562 UBR1Q8IWV7 1749 aa19.96■□□□□ 0.79
BRF1-212ENST00000547562 HDGFP51858 240 aaKnown RBP19.96■□□□□ 0.79
BRF1-212ENST00000547562 POLKQ9UBT6 870 aa19.96■□□□□ 0.79
BRF1-212ENST00000547562 TXNDC2Q86VQ3 553 aa19.95■□□□□ 0.78
BRF1-212ENST00000547562 CPS1P31327 1500 aa19.95■□□□□ 0.78
BRF1-212ENST00000547562 FCHSD2O94868 740 aa19.95■□□□□ 0.78
BRF1-212ENST00000547562 RIPK4P57078 832 aa19.95■□□□□ 0.78
BRF1-212ENST00000547562 SIRT1Q96EB6 747 aa19.95■□□□□ 0.78
BRF1-212ENST00000547562 DDRGK1Q96HY6 314 aa19.95■□□□□ 0.78
BRF1-212ENST00000547562 NBR1Q14596 966 aa19.94■□□□□ 0.78
BRF1-212ENST00000547562 MON2Q7Z3U7 1717 aa19.94■□□□□ 0.78
BRF1-212ENST00000547562 EXOSC9Q06265 439 aaKnown RBP19.94■□□□□ 0.78
BRF1-212ENST00000547562 PMFBP1Q8TBY8 1022 aa19.94■□□□□ 0.78
BRF1-212ENST00000547562 ZKSCAN2Q63HK3 967 aa19.93■□□□□ 0.78
BRF1-212ENST00000547562 FBLN1P23142 703 aa19.92■□□□□ 0.78
BRF1-212ENST00000547562 AKAP12Q02952 1782 aa19.92■□□□□ 0.78
BRF1-212ENST00000547562 PPM1GO15355 546 aaPredicted RBP19.92■□□□□ 0.78
BRF1-212ENST00000547562 PCDHB15Q9Y5E8 787 aa19.92■□□□□ 0.78
BRF1-212ENST00000547562 TMEM2Q9UHN6 1383 aa19.92■□□□□ 0.78
BRF1-212ENST00000547562 NUDT16Q96DE0 195 aaKnown RBP19.91■□□□□ 0.78
BRF1-212ENST00000547562 RSPH6AQ9H0K4 717 aa19.91■□□□□ 0.78
BRF1-212ENST00000547562 ITSN1Q15811 1721 aa19.91■□□□□ 0.78
BRF1-212ENST00000547562 MVPQ14764 893 aaKnown RBP19.91■□□□□ 0.78
BRF1-212ENST00000547562 SMC4Q9NTJ3 1288 aa19.9■□□□□ 0.78
BRF1-212ENST00000547562 DZIP1LQ8IYY4 767 aaKnown RBP19.9■□□□□ 0.78
BRF1-212ENST00000547562 CDK12Q9NYV4 1490 aaPredicted RBP19.89■□□□□ 0.78
BRF1-212ENST00000547562 PRKAR2BP31323 418 aa19.89■□□□□ 0.77
BRF1-212ENST00000547562 NME9Q86XW9 330 aa19.89■□□□□ 0.77
BRF1-212ENST00000547562 CCDC61Q9Y6R9 512 aa19.89■□□□□ 0.77
BRF1-212ENST00000547562 FTSJ3Q8IY81 847 aaKnown RBP19.88■□□□□ 0.77
BRF1-212ENST00000547562 C3P01024 1663 aa19.88■□□□□ 0.77
BRF1-212ENST00000547562 AATKQ6ZMQ8 1374 aa19.88■□□□□ 0.77
BRF1-212ENST00000547562 SSH1Q8WYL5 1049 aa19.88■□□□□ 0.77
BRF1-212ENST00000547562 NEFMP07197 916 aa19.87■□□□□ 0.77
BRF1-212ENST00000547562 EMILIN1Q9Y6C2 1016 aa19.87■□□□□ 0.77
BRF1-212ENST00000547562 NCKAP5LQ9HCH0 1330 aa19.86■□□□□ 0.77
BRF1-212ENST00000547562 ADAMTS13Q76LX8 1427 aa19.86■□□□□ 0.77
BRF1-212ENST00000547562 TRIM27P14373 513 aa19.85■□□□□ 0.77
BRF1-212ENST00000547562 RWDD1Q9H446 243 aaPredicted RBP19.85■□□□□ 0.77
BRF1-212ENST00000547562 IL13P35225 146 aa19.85■□□□□ 0.77
BRF1-212ENST00000547562 ZRANB1Q9UGI0 708 aa19.85■□□□□ 0.77
BRF1-212ENST00000547562 ROBO2Q9HCK4 1378 aa19.85■□□□□ 0.77
BRF1-212ENST00000547562 COG3Q96JB2 828 aa19.84■□□□□ 0.77
BRF1-212ENST00000547562 ATF7IPQ6VMQ6 1270 aa19.84■□□□□ 0.77
BRF1-212ENST00000547562 PRR36Q9H6K5 1346 aa19.83■□□□□ 0.77
BRF1-212ENST00000547562 HMOX1P09601 288 aa19.83■□□□□ 0.77
BRF1-212ENST00000547562 NFE2L2Q16236 605 aa19.83■□□□□ 0.77
BRF1-212ENST00000547562 ZNF692Q9BU19 519 aaPredicted RBP19.83■□□□□ 0.77
BRF1-212ENST00000547562 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.83■□□□□ 0.76
BRF1-212ENST00000547562 PHACTR3Q96KR7 559 aa19.83■□□□□ 0.76
BRF1-212ENST00000547562 PLEKHG1Q9ULL1 1385 aa19.82■□□□□ 0.76
BRF1-212ENST00000547562 RTL5Q5HYW3 569 aaPredicted RBP19.82■□□□□ 0.76
BRF1-212ENST00000547562 NOB1Q9ULX3 412 aaKnown RBP19.82■□□□□ 0.76
BRF1-212ENST00000547562 KIF16BQ96L93 1317 aa19.81■□□□□ 0.76
BRF1-212ENST00000547562 DLG5Q8TDM6 1919 aa19.81■□□□□ 0.76
BRF1-212ENST00000547562 DDX19BQ9UMR2 479 aa19.81■□□□□ 0.76
BRF1-212ENST00000547562 TOPAZ1Q8N9V7 1692 aa19.81■□□□□ 0.76
BRF1-212ENST00000547562 ALDH1L2Q3SY69 923 aa19.81■□□□□ 0.76
BRF1-212ENST00000547562 PDZRN3Q9UPQ7 1066 aa19.81■□□□□ 0.76
BRF1-212ENST00000547562 LAS1LQ9Y4W2 734 aaKnown RBP19.81■□□□□ 0.76
BRF1-212ENST00000547562 NRKQ7Z2Y5 1582 aa19.8■□□□□ 0.76
BRF1-212ENST00000547562 LTKP29376 864 aa19.79■□□□□ 0.76
BRF1-212ENST00000547562 CALD1Q05682 793 aaKnown RBP19.79■□□□□ 0.76
BRF1-212ENST00000547562 IPO8O15397 1037 aaKnown RBP19.78■□□□□ 0.76
BRF1-212ENST00000547562 RRS1Q15050 365 aaKnown RBP19.78■□□□□ 0.76
BRF1-212ENST00000547562 ITPRIPQ8IWB1 547 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 226.9 ms