RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 C1orf167Q5SNV9 1468 aa22.37■■□□□ 1.17
LETMD1-210ENST00000547555 PUS7Q96PZ0 661 aaKnown RBP22.36■■□□□ 1.17
LETMD1-210ENST00000547555 BLMP54132 1417 aaPredicted RBP22.35■■□□□ 1.17
LETMD1-210ENST00000547555 PRR36Q9H6K5 1346 aa22.35■■□□□ 1.17
LETMD1-210ENST00000547555 ATAD2Q6PL18 1390 aa22.33■■□□□ 1.17
LETMD1-210ENST00000547555 SRPK2P78362 688 aaKnown RBP22.33■■□□□ 1.16
LETMD1-210ENST00000547555 KIF1AQ12756 1690 aa22.32■■□□□ 1.16
LETMD1-210ENST00000547555 MYOM1P52179 1685 aa22.32■■□□□ 1.16
LETMD1-210ENST00000547555 CABP2Q9NPB3 220 aa22.32■■□□□ 1.16
LETMD1-210ENST00000547555 TOM1O60784 492 aa22.31■■□□□ 1.16
LETMD1-210ENST00000547555 CDCA8Q53HL2 280 aa22.31■■□□□ 1.16
LETMD1-210ENST00000547555 SLAIN2Q9P270 581 aa22.31■■□□□ 1.16
LETMD1-210ENST00000547555 NUDT16Q96DE0 195 aaKnown RBP22.3■■□□□ 1.16
LETMD1-210ENST00000547555 ROBO1Q9Y6N7 1651 aa22.3■■□□□ 1.16
LETMD1-210ENST00000547555 NUTM2FA1L443 756 aa22.3■■□□□ 1.16
LETMD1-210ENST00000547555 CCDC61Q9Y6R9 512 aa22.28■■□□□ 1.16
LETMD1-210ENST00000547555 UBAP1LF5GYI3 381 aa22.27■■□□□ 1.16
LETMD1-210ENST00000547555 EXOC6Q8TAG9 804 aa22.26■■□□□ 1.15
LETMD1-210ENST00000547555 PPIP5K1Q6PFW1 1433 aa22.26■■□□□ 1.15
LETMD1-210ENST00000547555 NINLQ9Y2I6 1382 aa22.26■■□□□ 1.15
LETMD1-210ENST00000547555 NHSL1Q5SYE7 1610 aa22.26■■□□□ 1.15
LETMD1-210ENST00000547555 NEFMP07197 916 aa22.26■■□□□ 1.15
LETMD1-210ENST00000547555 BRINP3Q76B58 766 aa22.25■■□□□ 1.15
LETMD1-210ENST00000547555 ORAI2Q96SN7 254 aa22.25■■□□□ 1.15
LETMD1-210ENST00000547555 AKAP12Q02952 1782 aa22.25■■□□□ 1.15
LETMD1-210ENST00000547555 PLEKHG3A1L390 1219 aa22.23■■□□□ 1.15
LETMD1-210ENST00000547555 ESCO1Q5FWF5 840 aa22.23■■□□□ 1.15
LETMD1-210ENST00000547555 POLR3AO14802 1390 aaPredicted RBP22.22■■□□□ 1.15
LETMD1-210ENST00000547555 PHF8Q9UPP1 1060 aa22.22■■□□□ 1.15
LETMD1-210ENST00000547555 AHDC1Q5TGY3 1603 aaPredicted RBP22.22■■□□□ 1.15
LETMD1-210ENST00000547555 CD163L1Q9NR16 1453 aa22.21■■□□□ 1.15
LETMD1-210ENST00000547555 MON2Q7Z3U7 1717 aa22.21■■□□□ 1.15
LETMD1-210ENST00000547555 PER1O15534 1290 aaPredicted RBP22.2■■□□□ 1.14
LETMD1-210ENST00000547555 CABP1Q9NZU7 370 aa22.2■■□□□ 1.14
LETMD1-210ENST00000547555 CPSF1Q10570 1443 aaKnown RBP22.19■■□□□ 1.14
LETMD1-210ENST00000547555 CENPQQ7L2Z9 268 aaPredicted RBP22.19■■□□□ 1.14
LETMD1-210ENST00000547555 SLC12A5Q9H2X9 1139 aa22.18■■□□□ 1.14
LETMD1-210ENST00000547555 PMFBP1Q8TBY8 1022 aa22.17■■□□□ 1.14
LETMD1-210ENST00000547555 NRKQ7Z2Y5 1582 aa22.17■■□□□ 1.14
LETMD1-210ENST00000547555 PIP4K2BP78356 416 aa22.17■■□□□ 1.14
LETMD1-210ENST00000547555 GSE1Q14687 1217 aa22.17■■□□□ 1.14
LETMD1-210ENST00000547555 ACEP12821 1306 aa22.16■■□□□ 1.14
LETMD1-210ENST00000547555 TRPM3Q9HCF6 1732 aaPredicted RBP22.16■■□□□ 1.14
LETMD1-210ENST00000547555 PXDNQ92626 1479 aa22.16■■□□□ 1.14
LETMD1-210ENST00000547555 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.16■■□□□ 1.14
LETMD1-210ENST00000547555 NPHP3Q7Z494 1330 aa22.16■■□□□ 1.14
LETMD1-210ENST00000547555 ANKRD36BQ8N2N9 1353 aa22.16■■□□□ 1.14
LETMD1-210ENST00000547555 NGEFQ8N5V2 710 aa22.15■■□□□ 1.14
LETMD1-210ENST00000547555 PHLPP1O60346 1717 aa22.15■■□□□ 1.14
LETMD1-210ENST00000547555 POLR3GLQ9BT43 218 aa22.14■■□□□ 1.14
LETMD1-210ENST00000547555 KDM2BQ8NHM5 1336 aa22.14■■□□□ 1.14
LETMD1-210ENST00000547555 A0A1W2PP64 1363 aa22.14■■□□□ 1.14
LETMD1-210ENST00000547555 FOXO3O43524 673 aa22.14■■□□□ 1.13
LETMD1-210ENST00000547555 USP6P35125 1406 aa22.13■■□□□ 1.13
LETMD1-210ENST00000547555 COL16A1Q07092 1604 aaPredicted RBP22.13■■□□□ 1.13
LETMD1-210ENST00000547555 NGDNQ8NEJ9 315 aaKnown RBP22.13■■□□□ 1.13
LETMD1-210ENST00000547555 PRKCSHP14314 528 aaPredicted RBP22.12■■□□□ 1.13
LETMD1-210ENST00000547555 SSH2Q76I76 1423 aa22.11■■□□□ 1.13
LETMD1-210ENST00000547555 SOS2Q07890 1332 aaPredicted RBP22.11■■□□□ 1.13
LETMD1-210ENST00000547555 TERF2IPQ9NYB0 399 aa22.11■■□□□ 1.13
LETMD1-210ENST00000547555 DDX17Q92841 729 aaKnown RBP22.11■■□□□ 1.13
LETMD1-210ENST00000547555 ZNF692Q9BU19 519 aaPredicted RBP22.11■■□□□ 1.13
LETMD1-210ENST00000547555 DAXXQ9UER7 740 aaPredicted RBP22.11■■□□□ 1.13
LETMD1-210ENST00000547555 ALS2Q96Q42 1657 aa22.1■■□□□ 1.13
LETMD1-210ENST00000547555 FAM161AQ3B820 660 aa22.1■■□□□ 1.13
LETMD1-210ENST00000547555 FBXO41Q8TF61 875 aa22.1■■□□□ 1.13
LETMD1-210ENST00000547555 VIRMAQ69YN4 1812 aaKnown RBP22.1■■□□□ 1.13
LETMD1-210ENST00000547555 HDGFL2Q7Z4V5 671 aaPredicted RBP22.09■■□□□ 1.13
LETMD1-210ENST00000547555 NPM2Q86SE8 214 aaKnown RBP22.09■■□□□ 1.13
LETMD1-210ENST00000547555 EDC4Q6P2E9 1401 aaKnown RBP22.09■■□□□ 1.13
LETMD1-210ENST00000547555 SBNO1A3KN83 1393 aa22.08■■□□□ 1.12
LETMD1-210ENST00000547555 NPC1L1Q9UHC9 1359 aa22.08■■□□□ 1.12
LETMD1-210ENST00000547555 PSME1Q06323 249 aa22.07■■□□□ 1.12
LETMD1-210ENST00000547555 KRT28Q7Z3Y7 464 aa22.07■■□□□ 1.12
LETMD1-210ENST00000547555 XPCQ01831 940 aaPredicted RBP22.05■■□□□ 1.12
LETMD1-210ENST00000547555 PIK3C2AO00443 1686 aa22.05■■□□□ 1.12
LETMD1-210ENST00000547555 TNS3Q68CZ2 1445 aa22.05■■□□□ 1.12
LETMD1-210ENST00000547555 NFKBIBQ15653 356 aa22.04■■□□□ 1.12
LETMD1-210ENST00000547555 PANK3Q9H999 370 aa22.04■■□□□ 1.12
LETMD1-210ENST00000547555 USP54Q70EL1 1684 aa22.04■■□□□ 1.12
LETMD1-210ENST00000547555 AAMPQ13685 434 aa22.04■■□□□ 1.12
LETMD1-210ENST00000547555 CARD14Q9BXL6 1004 aa22.04■■□□□ 1.12
LETMD1-210ENST00000547555 NSD3Q9BZ95 1437 aa22.03■■□□□ 1.12
LETMD1-210ENST00000547555 KIF20BQ96Q89 1820 aa22.03■■□□□ 1.12
LETMD1-210ENST00000547555 CRBNQ96SW2 442 aa22.03■■□□□ 1.12
LETMD1-210ENST00000547555 LAS1LQ9Y4W2 734 aaKnown RBP22.03■■□□□ 1.12
LETMD1-210ENST00000547555 SPATA31A3Q5VYP0 1347 aa22.02■■□□□ 1.12
LETMD1-210ENST00000547555 TTC21BQ7Z4L5 1316 aa22.02■■□□□ 1.12
LETMD1-210ENST00000547555 TTC21AQ8NDW8 1320 aa22.02■■□□□ 1.12
LETMD1-210ENST00000547555 SHPRHQ149N8 1683 aa22.01■■□□□ 1.11
LETMD1-210ENST00000547555 MARF1Q9Y4F3 1742 aaKnown RBP22.01■■□□□ 1.11
LETMD1-210ENST00000547555 COL22A1Q8NFW1 1626 aaPredicted RBP22.01■■□□□ 1.11
LETMD1-210ENST00000547555 IL27Q8NEV9 243 aa22.01■■□□□ 1.11
LETMD1-210ENST00000547555 ZNF521Q96K83 1311 aa22■■□□□ 1.11
LETMD1-210ENST00000547555 MED1Q15648 1581 aaPredicted RBP22■■□□□ 1.11
LETMD1-210ENST00000547555 CRYBG1Q9Y4K1 1723 aa21.99■■□□□ 1.11
LETMD1-210ENST00000547555 HSPA1LP34931 641 aa21.99■■□□□ 1.11
LETMD1-210ENST00000547555 ANKRD26Q9UPS8 1709 aa21.99■■□□□ 1.11
LETMD1-210ENST00000547555 LRRC59Q96AG4 307 aaKnown RBP21.98■■□□□ 1.11
LETMD1-210ENST00000547555 ARHGEF10O15013 1369 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms