RNA–Protein interactions for RNA: ENST00000547034.5

TMTC3-202, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 1 (best)

Gene TMTC3, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-202ENST00000547034 E9PSI1 815 aa22.59■■□□□ 1.21
TMTC3-202ENST00000547034 B4GALNT3Q6L9W6 998 aa22.59■■□□□ 1.21
TMTC3-202ENST00000547034 PIK3R4Q99570 1358 aa22.58■■□□□ 1.21
TMTC3-202ENST00000547034 NKTRP30414 1462 aaKnown RBP22.58■■□□□ 1.21
TMTC3-202ENST00000547034 CCDC27Q2M243 656 aa22.58■■□□□ 1.21
TMTC3-202ENST00000547034 SLC26A8Q96RN1 970 aa22.58■■□□□ 1.21
TMTC3-202ENST00000547034 WWC1Q8IX03 1113 aa22.57■■□□□ 1.2
TMTC3-202ENST00000547034 ZNF692Q9BU19 519 aaPredicted RBP22.56■■□□□ 1.2
TMTC3-202ENST00000547034 DNAJC5Q9H3Z4 198 aa22.56■■□□□ 1.2
TMTC3-202ENST00000547034 TCP11L2Q8N4U5 519 aa22.55■■□□□ 1.2
TMTC3-202ENST00000547034 SPINK5Q9NQ38 1064 aaPredicted RBP22.55■■□□□ 1.2
TMTC3-202ENST00000547034 AATKQ6ZMQ8 1374 aa22.55■■□□□ 1.2
TMTC3-202ENST00000547034 AMOTL2Q9Y2J4 779 aa22.54■■□□□ 1.2
TMTC3-202ENST00000547034 MAP2P11137 1827 aaKnown RBP22.54■■□□□ 1.2
TMTC3-202ENST00000547034 PLEKHG3A1L390 1219 aa22.53■■□□□ 1.2
TMTC3-202ENST00000547034 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.53■■□□□ 1.2
TMTC3-202ENST00000547034 SETD1BQ9UPS6 1966 aaKnown RBP22.53■■□□□ 1.2
TMTC3-202ENST00000547034 U2AF1L5P0DN76 240 aaPredicted RBP22.52■■□□□ 1.2
TMTC3-202ENST00000547034 U2AF1Q01081 240 aaKnown RBP eCLIP22.52■■□□□ 1.2
TMTC3-202ENST00000547034 PLPPR3Q6T4P5 718 aa22.52■■□□□ 1.2
TMTC3-202ENST00000547034 DMRT2Q9Y5R5 561 aa22.52■■□□□ 1.2
TMTC3-202ENST00000547034 NCKAP5LQ9HCH0 1330 aa22.51■■□□□ 1.19
TMTC3-202ENST00000547034 CDK12Q9NYV4 1490 aaPredicted RBP22.51■■□□□ 1.19
TMTC3-202ENST00000547034 WDR63Q8IWG1 891 aa22.51■■□□□ 1.19
TMTC3-202ENST00000547034 PLEKHF1Q96S99 279 aa22.51■■□□□ 1.19
TMTC3-202ENST00000547034 POLKQ9UBT6 870 aa22.5■■□□□ 1.19
TMTC3-202ENST00000547034 DIAPH1O60610 1272 aaKnown RBP22.49■■□□□ 1.19
TMTC3-202ENST00000547034 NME9Q86XW9 330 aa22.49■■□□□ 1.19
TMTC3-202ENST00000547034 EXOC6Q8TAG9 804 aa22.49■■□□□ 1.19
TMTC3-202ENST00000547034 NALCNQ8IZF0 1738 aa22.48■■□□□ 1.19
TMTC3-202ENST00000547034 CCDC136Q96JN2 1154 aa22.48■■□□□ 1.19
TMTC3-202ENST00000547034 USP6P35125 1406 aa22.48■■□□□ 1.19
TMTC3-202ENST00000547034 CHD2O14647 1828 aaKnown RBP22.48■■□□□ 1.19
TMTC3-202ENST00000547034 SSH2Q76I76 1423 aa22.47■■□□□ 1.19
TMTC3-202ENST00000547034 OVOS2A0A0J9YW53 1432 aa22.45■■□□□ 1.18
TMTC3-202ENST00000547034 OVOS2Q6IE36 1432 aa22.45■■□□□ 1.18
TMTC3-202ENST00000547034 ANKARQ7Z5J8 1434 aa22.45■■□□□ 1.18
TMTC3-202ENST00000547034 ACEP12821 1306 aa22.45■■□□□ 1.18
TMTC3-202ENST00000547034 FMN2Q9NZ56 1722 aa22.45■■□□□ 1.18
TMTC3-202ENST00000547034 LRRC7Q96NW7 1537 aa22.44■■□□□ 1.18
TMTC3-202ENST00000547034 PLIN1O60240 522 aa22.44■■□□□ 1.18
TMTC3-202ENST00000547034 COG3Q96JB2 828 aa22.44■■□□□ 1.18
TMTC3-202ENST00000547034 RRP7AQ9Y3A4 280 aaKnown RBP22.44■■□□□ 1.18
TMTC3-202ENST00000547034 TTC21BQ7Z4L5 1316 aa22.43■■□□□ 1.18
TMTC3-202ENST00000547034 U2SURPO15042 1029 aaKnown RBP22.43■■□□□ 1.18
TMTC3-202ENST00000547034 PNNQ9H307 717 aaKnown RBP22.43■■□□□ 1.18
TMTC3-202ENST00000547034 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.43■■□□□ 1.18
TMTC3-202ENST00000547034 RGPD8O14715 1765 aaPredicted RBP22.42■■□□□ 1.18
TMTC3-202ENST00000547034 ANKLE2Q86XL3 938 aa22.42■■□□□ 1.18
TMTC3-202ENST00000547034 ZRANB1Q9UGI0 708 aa22.42■■□□□ 1.18
TMTC3-202ENST00000547034 FCHSD2O94868 740 aa22.41■■□□□ 1.18
TMTC3-202ENST00000547034 NEUROD2Q15784 382 aa22.41■■□□□ 1.18
TMTC3-202ENST00000547034 KCNA6P17658 529 aa22.4■■□□□ 1.18
TMTC3-202ENST00000547034 TMPOP42166 694 aaKnown RBP22.4■■□□□ 1.18
TMTC3-202ENST00000547034 USP31Q70CQ4 1352 aa22.4■■□□□ 1.18
TMTC3-202ENST00000547034 CRBNQ96SW2 442 aa22.39■■□□□ 1.17
TMTC3-202ENST00000547034 EMILIN1Q9Y6C2 1016 aa22.39■■□□□ 1.17
TMTC3-202ENST00000547034 MAPK8IP3Q9UPT6 1336 aa22.39■■□□□ 1.17
TMTC3-202ENST00000547034 FBLN1P23142 703 aa22.38■■□□□ 1.17
TMTC3-202ENST00000547034 TTC21AQ8NDW8 1320 aa22.38■■□□□ 1.17
TMTC3-202ENST00000547034 IL13P35225 146 aa22.38■■□□□ 1.17
TMTC3-202ENST00000547034 RSPH6AQ9H0K4 717 aa22.38■■□□□ 1.17
TMTC3-202ENST00000547034 C20orf194Q5TEA3 1177 aa22.37■■□□□ 1.17
TMTC3-202ENST00000547034 USP54Q70EL1 1684 aa22.37■■□□□ 1.17
TMTC3-202ENST00000547034 IL16Q14005 1332 aa22.37■■□□□ 1.17
TMTC3-202ENST00000547034 MYH16Q9H6N6 1097 aa22.36■■□□□ 1.17
TMTC3-202ENST00000547034 TRIM35Q9UPQ4 493 aa22.36■■□□□ 1.17
TMTC3-202ENST00000547034 NUTM2FA1L443 756 aa22.33■■□□□ 1.16
TMTC3-202ENST00000547034 RBM19Q9Y4C8 960 aaKnown RBP22.33■■□□□ 1.16
TMTC3-202ENST00000547034 PIK3C2AO00443 1686 aa22.32■■□□□ 1.16
TMTC3-202ENST00000547034 PEAK1Q9H792 1746 aa22.32■■□□□ 1.16
TMTC3-202ENST00000547034 NPHP4O75161 1426 aaPredicted RBP22.32■■□□□ 1.16
TMTC3-202ENST00000547034 PPM1GO15355 546 aaPredicted RBP22.32■■□□□ 1.16
TMTC3-202ENST00000547034 BCAR3O75815 825 aa22.31■■□□□ 1.16
TMTC3-202ENST00000547034 CT47B1P0C2W7 299 aaPredicted RBP22.31■■□□□ 1.16
TMTC3-202ENST00000547034 NWD1Q149M9 1564 aa22.31■■□□□ 1.16
TMTC3-202ENST00000547034 RGPD1P0DJD0 1748 aa22.3■■□□□ 1.16
TMTC3-202ENST00000547034 PRKAR2BP31323 418 aa22.3■■□□□ 1.16
TMTC3-202ENST00000547034 RRS1Q15050 365 aaKnown RBP22.3■■□□□ 1.16
TMTC3-202ENST00000547034 RARSP54136 660 aaKnown RBP22.29■■□□□ 1.16
TMTC3-202ENST00000547034 MARF1Q9Y4F3 1742 aaKnown RBP22.29■■□□□ 1.16
TMTC3-202ENST00000547034 RIPK4P57078 832 aa22.29■■□□□ 1.16
TMTC3-202ENST00000547034 PDE3AQ14432 1141 aa22.29■■□□□ 1.16
TMTC3-202ENST00000547034 ADGRL3Q9HAR2 1447 aa22.28■■□□□ 1.16
TMTC3-202ENST00000547034 FANCIQ9NVI1 1328 aa22.28■■□□□ 1.16
TMTC3-202ENST00000547034 PMFBP1Q8TBY8 1022 aa22.27■■□□□ 1.16
TMTC3-202ENST00000547034 NFE2L2Q16236 605 aa22.26■■□□□ 1.15
TMTC3-202ENST00000547034 NGDNQ8NEJ9 315 aaKnown RBP22.26■■□□□ 1.15
TMTC3-202ENST00000547034 NEFMP07197 916 aa22.25■■□□□ 1.15
TMTC3-202ENST00000547034 DLG5Q8TDM6 1919 aa22.24■■□□□ 1.15
TMTC3-202ENST00000547034 KDM2BQ8NHM5 1336 aa22.24■■□□□ 1.15
TMTC3-202ENST00000547034 PHACTR3Q96KR7 559 aa22.23■■□□□ 1.15
TMTC3-202ENST00000547034 HMOX1P09601 288 aa22.22■■□□□ 1.15
TMTC3-202ENST00000547034 EIF4A2Q14240 407 aaKnown RBP22.22■■□□□ 1.15
TMTC3-202ENST00000547034 SBNO1A3KN83 1393 aa22.21■■□□□ 1.15
TMTC3-202ENST00000547034 TSR2Q969E8 191 aaKnown RBP22.2■■□□□ 1.14
TMTC3-202ENST00000547034 KIF24Q5T7B8 1368 aa22.19■■□□□ 1.14
TMTC3-202ENST00000547034 FLT4P35916 1363 aa22.19■■□□□ 1.14
TMTC3-202ENST00000547034 MAP3K19Q56UN5 1328 aa22.18■■□□□ 1.14
TMTC3-202ENST00000547034 CALD1Q05682 793 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms