RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 HDGFL2Q7Z4V5 671 aaPredicted RBP35.52■■■■□ 3.28
NKX2-1-205ENST00000546983 USP6P35125 1406 aa35.51■■■■□ 3.28
NKX2-1-205ENST00000546983 TMC1Q8TDI8 760 aa35.49■■■■□ 3.27
NKX2-1-205ENST00000546983 CPSF1Q10570 1443 aaKnown RBP35.49■■■■□ 3.27
NKX2-1-205ENST00000546983 ALS2Q96Q42 1657 aa35.46■■■■□ 3.27
NKX2-1-205ENST00000546983 ADAMTS2O95450 1211 aa35.46■■■■□ 3.27
NKX2-1-205ENST00000546983 NLRP13Q86W25 1043 aa35.46■■■■□ 3.27
NKX2-1-205ENST00000546983 ABTB2Q8N961 1025 aa35.46■■■■□ 3.27
NKX2-1-205ENST00000546983 TTC21AQ8NDW8 1320 aa35.46■■■■□ 3.27
NKX2-1-205ENST00000546983 NGLY1Q96IV0 654 aa35.45■■■■□ 3.27
NKX2-1-205ENST00000546983 KTN1Q86UP2 1357 aaKnown RBP35.44■■■■□ 3.26
NKX2-1-205ENST00000546983 C8orf37Q96NL8 207 aa35.44■■■■□ 3.26
NKX2-1-205ENST00000546983 HSPA5P11021 654 aaKnown RBP35.42■■■■□ 3.26
NKX2-1-205ENST00000546983 SLC12A5Q9H2X9 1139 aa35.4■■■■□ 3.26
NKX2-1-205ENST00000546983 SSH2Q76I76 1423 aa35.4■■■■□ 3.26
NKX2-1-205ENST00000546983 AFF2P51816 1311 aa35.38■■■■□ 3.25
NKX2-1-205ENST00000546983 FNBP4Q8N3X1 1017 aaPredicted RBP35.38■■■■□ 3.25
NKX2-1-205ENST00000546983 TTC21BQ7Z4L5 1316 aa35.37■■■■□ 3.25
NKX2-1-205ENST00000546983 EDC4Q6P2E9 1401 aaKnown RBP35.35■■■■□ 3.25
NKX2-1-205ENST00000546983 CABLES1Q8TDN4 633 aa35.35■■■■□ 3.25
NKX2-1-205ENST00000546983 RGS17Q9UGC6 210 aaPredicted RBP35.35■■■■□ 3.25
NKX2-1-205ENST00000546983 AKAP12Q02952 1782 aa35.34■■■■□ 3.25
NKX2-1-205ENST00000546983 ANKRD36BQ8N2N9 1353 aa35.34■■■■□ 3.25
NKX2-1-205ENST00000546983 NLRP6P59044 892 aa35.33■■■■□ 3.25
NKX2-1-205ENST00000546983 USP19O94966 1318 aa35.32■■■■□ 3.25
NKX2-1-205ENST00000546983 CD163L1Q9NR16 1453 aa35.31■■■■□ 3.24
NKX2-1-205ENST00000546983 USP21Q9UK80 565 aa35.31■■■■□ 3.24
NKX2-1-205ENST00000546983 A0A1W2PP64 1363 aa35.3■■■■□ 3.24
NKX2-1-205ENST00000546983 MARF1Q9Y4F3 1742 aaKnown RBP35.29■■■■□ 3.24
NKX2-1-205ENST00000546983 KCNH5Q8NCM2 988 aa35.28■■■■□ 3.24
NKX2-1-205ENST00000546983 MON2Q7Z3U7 1717 aa35.27■■■■□ 3.24
NKX2-1-205ENST00000546983 TRPC5Q9UL62 973 aaPredicted RBP35.27■■■■□ 3.24
NKX2-1-205ENST00000546983 NUTM2GQ5VZR2 741 aa35.26■■■■□ 3.24
NKX2-1-205ENST00000546983 ABCA3Q99758 1704 aa35.26■■■■□ 3.23
NKX2-1-205ENST00000546983 PLEKHG5O94827 1062 aa35.25■■■■□ 3.23
NKX2-1-205ENST00000546983 GCP02774 474 aa35.24■■■■□ 3.23
NKX2-1-205ENST00000546983 PRDM11Q9NQV5 511 aa35.24■■■■□ 3.23
NKX2-1-205ENST00000546983 SLIT2O94813 1529 aa35.23■■■■□ 3.23
NKX2-1-205ENST00000546983 NRKQ7Z2Y5 1582 aa35.23■■■■□ 3.23
NKX2-1-205ENST00000546983 QTRT2Q9H974 415 aaKnown RBP35.23■■■■□ 3.23
NKX2-1-205ENST00000546983 CPDO75976 1380 aa35.23■■■■□ 3.23
NKX2-1-205ENST00000546983 USP31Q70CQ4 1352 aa35.23■■■■□ 3.23
NKX2-1-205ENST00000546983 POTEAQ6S8J7 498 aa35.22■■■■□ 3.23
NKX2-1-205ENST00000546983 UNC5CLQ8IV45 518 aa35.22■■■■□ 3.23
NKX2-1-205ENST00000546983 RXRBP28702 533 aa35.21■■■■□ 3.23
NKX2-1-205ENST00000546983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.21■■■■□ 3.23
NKX2-1-205ENST00000546983 ZEB1P37275 1124 aaPredicted RBP35.2■■■■□ 3.23
NKX2-1-205ENST00000546983 CRYBG1Q9Y4K1 1723 aa35.2■■■■□ 3.23
NKX2-1-205ENST00000546983 FAM83GA6ND36 823 aa35.19■■■■□ 3.22
NKX2-1-205ENST00000546983 RBM6P78332 1123 aaKnown RBP35.19■■■■□ 3.22
NKX2-1-205ENST00000546983 PHRF1Q9P1Y6 1649 aaKnown RBP35.18■■■■□ 3.22
NKX2-1-205ENST00000546983 SLIT3O75094 1523 aa35.17■■■■□ 3.22
NKX2-1-205ENST00000546983 BCL9LQ86UU0 1499 aa35.17■■■■□ 3.22
NKX2-1-205ENST00000546983 COL14A1Q05707 1796 aaKnown RBP35.17■■■■□ 3.22
NKX2-1-205ENST00000546983 PIK3C2AO00443 1686 aa35.17■■■■□ 3.22
NKX2-1-205ENST00000546983 KIAA0232Q92628 1395 aa35.16■■■■□ 3.22
NKX2-1-205ENST00000546983 ZC3H6P61129 1189 aaKnown RBP35.15■■■■□ 3.22
NKX2-1-205ENST00000546983 POLR3GLQ9BT43 218 aa35.15■■■■□ 3.22
NKX2-1-205ENST00000546983 NWD2Q9ULI1 1742 aa35.15■■■■□ 3.22
NKX2-1-205ENST00000546983 CDK12Q9NYV4 1490 aaPredicted RBP35.14■■■■□ 3.22
NKX2-1-205ENST00000546983 ATRNO75882 1429 aa35.14■■■■□ 3.22
NKX2-1-205ENST00000546983 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.12■■■■□ 3.21
NKX2-1-205ENST00000546983 COG3Q96JB2 828 aa35.12■■■■□ 3.21
NKX2-1-205ENST00000546983 BTG4Q9NY30 223 aa35.12■■■■□ 3.21
NKX2-1-205ENST00000546983 ILDR2Q71H61 639 aa35.11■■■■□ 3.21
NKX2-1-205ENST00000546983 NME9Q86XW9 330 aa35.11■■■■□ 3.21
NKX2-1-205ENST00000546983 VPS72Q15906 364 aa35.1■■■■□ 3.21
NKX2-1-205ENST00000546983 USP54Q70EL1 1684 aa35.09■■■■□ 3.21
NKX2-1-205ENST00000546983 GJD4Q96KN9 370 aaPredicted RBP35.07■■■■□ 3.2
NKX2-1-205ENST00000546983 AATKQ6ZMQ8 1374 aa35.07■■■■□ 3.2
NKX2-1-205ENST00000546983 MYOM1P52179 1685 aa35.06■■■■□ 3.2
NKX2-1-205ENST00000546983 CGNL1Q0VF96 1302 aa35.06■■■■□ 3.2
NKX2-1-205ENST00000546983 PLCH1Q4KWH8 1693 aa35.05■■■■□ 3.2
NKX2-1-205ENST00000546983 OVOS2A0A0J9YW53 1432 aa35.05■■■■□ 3.2
NKX2-1-205ENST00000546983 OVOS2Q6IE36 1432 aa35.05■■■■□ 3.2
NKX2-1-205ENST00000546983 ARHGEF25Q86VW2 580 aa35.04■■■■□ 3.2
NKX2-1-205ENST00000546983 KIF7Q2M1P5 1343 aa35.03■■■■□ 3.2
NKX2-1-205ENST00000546983 FYB1O15117 783 aa35.02■■■■□ 3.2
NKX2-1-205ENST00000546983 EVA1CP58658 441 aa35.02■■■■□ 3.2
NKX2-1-205ENST00000546983 CHRNA2Q15822 529 aa35.02■■■■□ 3.2
NKX2-1-205ENST00000546983 ABCC6O95255 1503 aa35.01■■■■□ 3.2
NKX2-1-205ENST00000546983 NSD3Q9BZ95 1437 aa35.01■■■■□ 3.2
NKX2-1-205ENST00000546983 CCDC9Q9Y3X0 531 aaKnown RBP35.01■■■■□ 3.2
NKX2-1-205ENST00000546983 C11orf95C9JLR9 678 aaPredicted RBP34.99■■■■□ 3.19
NKX2-1-205ENST00000546983 CARD14Q9BXL6 1004 aa34.99■■■■□ 3.19
NKX2-1-205ENST00000546983 NFAT5O94916 1531 aa34.97■■■■□ 3.19
NKX2-1-205ENST00000546983 PANK3Q9H999 370 aa34.97■■■■□ 3.19
NKX2-1-205ENST00000546983 ZRANB1Q9UGI0 708 aa34.96■■■■□ 3.19
NKX2-1-205ENST00000546983 ZBTB7CA1YPR0 619 aa34.94■■■■□ 3.18
NKX2-1-205ENST00000546983 SOX12O15370 315 aa34.94■■■■□ 3.18
NKX2-1-205ENST00000546983 NRAPQ86VF7 1730 aa34.93■■■■□ 3.18
NKX2-1-205ENST00000546983 NSD2O96028 1365 aa34.93■■■■□ 3.18
NKX2-1-205ENST00000546983 CCDC7Q96M83 1385 aa34.93■■■■□ 3.18
NKX2-1-205ENST00000546983 SOCS7O14512 581 aa34.93■■■■□ 3.18
NKX2-1-205ENST00000546983 LMO7Q8WWI1 1683 aa34.92■■■■□ 3.18
NKX2-1-205ENST00000546983 SPATA31A5Q5VU36 1347 aa34.92■■■■□ 3.18
NKX2-1-205ENST00000546983 SPATA31A7Q8IWB4 1347 aa34.92■■■■□ 3.18
NKX2-1-205ENST00000546983 GGNBP2Q9H3C7 697 aa34.92■■■■□ 3.18
NKX2-1-205ENST00000546983 STRN4Q9NRL3 753 aa34.92■■■■□ 3.18
NKX2-1-205ENST00000546983 KNSTRNQ9Y448 316 aa34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms