RNA–Protein interactions for RNA: ENST00000546279.5

LMO3-233, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-233ENST00000546279 AKAP12Q02952 1782 aa15.06■□□□□ 0
LMO3-233ENST00000546279 BLMP54132 1417 aaPredicted RBP15.05■□□□□ -0
LMO3-233ENST00000546279 ZEB1P37275 1124 aaPredicted RBP15.03■□□□□ -0
LMO3-233ENST00000546279 CDK19Q9BWU1 502 aa15.03■□□□□ -0
LMO3-233ENST00000546279 TRPM3Q9HCF6 1732 aaPredicted RBP15.03■□□□□ -0
LMO3-233ENST00000546279 EIF4G2P78344 907 aaKnown RBP eCLIP15.02■□□□□ -0
LMO3-233ENST00000546279 ORAI2Q96SN7 254 aa15.02■□□□□ -0
LMO3-233ENST00000546279 EP400Q96L91 3159 aa15.01□□□□□ -0.01
LMO3-233ENST00000546279 BCL9LQ86UU0 1499 aa15.01□□□□□ -0.01
LMO3-233ENST00000546279 MON2Q7Z3U7 1717 aa15.01□□□□□ -0.01
LMO3-233ENST00000546279 C11orf95C9JLR9 678 aaPredicted RBP15.01□□□□□ -0.01
LMO3-233ENST00000546279 CD163L1Q9NR16 1453 aa15.01□□□□□ -0.01
LMO3-233ENST00000546279 NPHP3Q7Z494 1330 aa15□□□□□ -0.01
LMO3-233ENST00000546279 NRKQ7Z2Y5 1582 aa15□□□□□ -0.01
LMO3-233ENST00000546279 PXDNQ92626 1479 aa15□□□□□ -0.01
LMO3-233ENST00000546279 COL22A1Q8NFW1 1626 aaPredicted RBP14.99□□□□□ -0.01
LMO3-233ENST00000546279 MYCNP04198 464 aaPredicted RBP14.99□□□□□ -0.01
LMO3-233ENST00000546279 NUDT16Q96DE0 195 aaKnown RBP14.99□□□□□ -0.01
LMO3-233ENST00000546279 PUS7Q96PZ0 661 aaKnown RBP14.99□□□□□ -0.01
LMO3-233ENST00000546279 CABP2Q9NPB3 220 aa14.99□□□□□ -0.01
LMO3-233ENST00000546279 LRP5O75197 1615 aa14.99□□□□□ -0.01
LMO3-233ENST00000546279 EVC2Q86UK5 1308 aa14.98□□□□□ -0.01
LMO3-233ENST00000546279 ALS2Q96Q42 1657 aa14.98□□□□□ -0.01
LMO3-233ENST00000546279 NUTM2FA1L443 756 aa14.98□□□□□ -0.01
LMO3-233ENST00000546279 UNC5CLQ8IV45 518 aa14.98□□□□□ -0.01
LMO3-233ENST00000546279 POLR3AO14802 1390 aaPredicted RBP14.98□□□□□ -0.01
LMO3-233ENST00000546279 DEFB132Q7Z7B7 95 aa14.97□□□□□ -0.01
LMO3-233ENST00000546279 MARF1Q9Y4F3 1742 aaKnown RBP14.97□□□□□ -0.01
LMO3-233ENST00000546279 PLEKHG3A1L390 1219 aa14.96□□□□□ -0.01
LMO3-233ENST00000546279 CRYBG1Q9Y4K1 1723 aa14.96□□□□□ -0.01
LMO3-233ENST00000546279 CPSF1Q10570 1443 aaKnown RBP14.95□□□□□ -0.02
LMO3-233ENST00000546279 PPIP5K1Q6PFW1 1433 aa14.95□□□□□ -0.02
LMO3-233ENST00000546279 SSH2Q76I76 1423 aa14.95□□□□□ -0.02
LMO3-233ENST00000546279 ESCO1Q5FWF5 840 aa14.95□□□□□ -0.02
LMO3-233ENST00000546279 CCDC61Q9Y6R9 512 aa14.94□□□□□ -0.02
LMO3-233ENST00000546279 USP54Q70EL1 1684 aa14.93□□□□□ -0.02
LMO3-233ENST00000546279 PHF8Q9UPP1 1060 aa14.93□□□□□ -0.02
LMO3-233ENST00000546279 ABCA3Q99758 1704 aa14.92□□□□□ -0.02
LMO3-233ENST00000546279 BAG6P46379 1132 aa14.92□□□□□ -0.02
LMO3-233ENST00000546279 SRPK2P78362 688 aaKnown RBP14.92□□□□□ -0.02
LMO3-233ENST00000546279 TMF1P82094 1093 aa14.92□□□□□ -0.02
LMO3-233ENST00000546279 SEPT12Q8IYM1 358 aa14.92□□□□□ -0.02
LMO3-233ENST00000546279 KIF7Q2M1P5 1343 aa14.92□□□□□ -0.02
LMO3-233ENST00000546279 PIK3C2AO00443 1686 aa14.91□□□□□ -0.02
LMO3-233ENST00000546279 FOXO3O43524 673 aa14.91□□□□□ -0.02
LMO3-233ENST00000546279 SLC24A1O60721 1099 aa14.91□□□□□ -0.02
LMO3-233ENST00000546279 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.91□□□□□ -0.02
LMO3-233ENST00000546279 ACEP12821 1306 aa14.91□□□□□ -0.02
LMO3-233ENST00000546279 WASHC2AQ641Q2 1341 aa14.91□□□□□ -0.02
LMO3-233ENST00000546279 CCDC7Q96M83 1385 aa14.9□□□□□ -0.02
LMO3-233ENST00000546279 PMFBP1Q8TBY8 1022 aa14.9□□□□□ -0.02
LMO3-233ENST00000546279 CABP1Q9NZU7 370 aa14.9□□□□□ -0.02
LMO3-233ENST00000546279 SLIT2O94813 1529 aa14.9□□□□□ -0.02
LMO3-233ENST00000546279 NINLQ9Y2I6 1382 aa14.89□□□□□ -0.03
LMO3-233ENST00000546279 ONECUT3O60422 494 aaPredicted RBP14.89□□□□□ -0.03
LMO3-233ENST00000546279 VPS72Q15906 364 aa14.89□□□□□ -0.03
LMO3-233ENST00000546279 KRT27Q7Z3Y8 459 aa14.89□□□□□ -0.03
LMO3-233ENST00000546279 SLC12A5Q9H2X9 1139 aa14.89□□□□□ -0.03
LMO3-233ENST00000546279 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
LMO3-233ENST00000546279 USP6P35125 1406 aa14.89□□□□□ -0.03
LMO3-233ENST00000546279 A0A1W2PP64 1363 aa14.88□□□□□ -0.03
LMO3-233ENST00000546279 PSDA5PKW4 1024 aaPredicted RBP14.88□□□□□ -0.03
LMO3-233ENST00000546279 GLI3P10071 1580 aa14.88□□□□□ -0.03
LMO3-233ENST00000546279 HAP1P54257 671 aaPredicted RBP14.87□□□□□ -0.03
LMO3-233ENST00000546279 XPCQ01831 940 aaPredicted RBP14.87□□□□□ -0.03
LMO3-233ENST00000546279 SBNO1A3KN83 1393 aa14.86□□□□□ -0.03
LMO3-233ENST00000546279 CCDC9Q9Y3X0 531 aaKnown RBP14.86□□□□□ -0.03
LMO3-233ENST00000546279 KIF20BQ96Q89 1820 aa14.86□□□□□ -0.03
LMO3-233ENST00000546279 ANKRD36BQ8N2N9 1353 aa14.85□□□□□ -0.03
LMO3-233ENST00000546279 PHRF1Q9P1Y6 1649 aaKnown RBP14.85□□□□□ -0.03
LMO3-233ENST00000546279 SPATA31A3Q5VYP0 1347 aa14.85□□□□□ -0.03
LMO3-233ENST00000546279 TNS3Q68CZ2 1445 aa14.84□□□□□ -0.03
LMO3-233ENST00000546279 ANKRD26Q9UPS8 1709 aa14.84□□□□□ -0.03
LMO3-233ENST00000546279 CDCA8Q53HL2 280 aa14.84□□□□□ -0.03
LMO3-233ENST00000546279 KRT28Q7Z3Y7 464 aa14.84□□□□□ -0.03
LMO3-233ENST00000546279 BRD4O60885 1362 aaPredicted RBP14.84□□□□□ -0.03
LMO3-233ENST00000546279 BRWD3Q6RI45 1802 aa14.83□□□□□ -0.04
LMO3-233ENST00000546279 CARD14Q9BXL6 1004 aa14.83□□□□□ -0.04
LMO3-233ENST00000546279 EDC4Q6P2E9 1401 aaKnown RBP14.83□□□□□ -0.04
LMO3-233ENST00000546279 A0A0G2JS52 829 aa14.82□□□□□ -0.04
LMO3-233ENST00000546279 YY1P25490 414 aa14.82□□□□□ -0.04
LMO3-233ENST00000546279 MYT1Q01538 1121 aa14.82□□□□□ -0.04
LMO3-233ENST00000546279 PSME1Q06323 249 aa14.82□□□□□ -0.04
LMO3-233ENST00000546279 NGDNQ8NEJ9 315 aaKnown RBP14.82□□□□□ -0.04
LMO3-233ENST00000546279 KTN1Q86UP2 1357 aaKnown RBP14.81□□□□□ -0.04
LMO3-233ENST00000546279 SLIT3O75094 1523 aa14.81□□□□□ -0.04
LMO3-233ENST00000546279 R3HDM1Q15032 1099 aaKnown RBP14.8□□□□□ -0.04
LMO3-233ENST00000546279 ZNF692Q9BU19 519 aaPredicted RBP14.8□□□□□ -0.04
LMO3-233ENST00000546279 TTC21BQ7Z4L5 1316 aa14.8□□□□□ -0.04
LMO3-233ENST00000546279 EN1Q05925 392 aaPredicted RBP14.79□□□□□ -0.04
LMO3-233ENST00000546279 TMC1Q8TDI8 760 aa14.79□□□□□ -0.04
LMO3-233ENST00000546279 OVOS2A0A0J9YW53 1432 aa14.78□□□□□ -0.04
LMO3-233ENST00000546279 OVOS2Q6IE36 1432 aa14.78□□□□□ -0.04
LMO3-233ENST00000546279 USP31Q70CQ4 1352 aa14.78□□□□□ -0.04
LMO3-233ENST00000546279 PER1O15534 1290 aaPredicted RBP14.78□□□□□ -0.04
LMO3-233ENST00000546279 NFAT5O94916 1531 aa14.77□□□□□ -0.04
LMO3-233ENST00000546279 NSD3Q9BZ95 1437 aa14.77□□□□□ -0.04
LMO3-233ENST00000546279 USP19O94966 1318 aa14.77□□□□□ -0.04
LMO3-233ENST00000546279 TERF2IPQ9NYB0 399 aa14.77□□□□□ -0.05
LMO3-233ENST00000546279 COL18A1P39060 1754 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms