RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 MAP4K4O95819 1239 aaPredicted RBP12.17□□□□□ -0.46
TRAF1-203ENST00000546084 HAP1P54257 671 aaPredicted RBP12.17□□□□□ -0.46
TRAF1-203ENST00000546084 AEBP1Q8IUX7 1158 aa12.17□□□□□ -0.46
TRAF1-203ENST00000546084 NAP1L2Q9ULW6 460 aaPredicted RBP12.17□□□□□ -0.46
TRAF1-203ENST00000546084 SCAF11Q99590 1463 aaKnown RBP12.17□□□□□ -0.46
TRAF1-203ENST00000546084 GOLGA6L22H0YM25 854 aa12.16□□□□□ -0.46
TRAF1-203ENST00000546084 USHBP1Q8N6Y0 703 aa12.16□□□□□ -0.46
TRAF1-203ENST00000546084 INSRP06213 1382 aa12.16□□□□□ -0.46
TRAF1-203ENST00000546084 FKBP5Q13451 457 aaPredicted RBP12.16□□□□□ -0.46
TRAF1-203ENST00000546084 C14orf93Q9H972 538 aaKnown RBP12.16□□□□□ -0.46
TRAF1-203ENST00000546084 USP19O94966 1318 aa12.16□□□□□ -0.46
TRAF1-203ENST00000546084 ERCC6L2Q5T890 1561 aa12.16□□□□□ -0.46
TRAF1-203ENST00000546084 KCNJ4P48050 445 aa12.15□□□□□ -0.46
TRAF1-203ENST00000546084 TRMT2AQ8IZ69 625 aaKnown RBP12.15□□□□□ -0.46
TRAF1-203ENST00000546084 PLCH2O75038 1416 aa12.15□□□□□ -0.46
TRAF1-203ENST00000546084 CD109Q6YHK3 1445 aa12.15□□□□□ -0.46
TRAF1-203ENST00000546084 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
TRAF1-203ENST00000546084 MCM4P33991 863 aa12.15□□□□□ -0.46
TRAF1-203ENST00000546084 NLRP6P59044 892 aa12.15□□□□□ -0.46
TRAF1-203ENST00000546084 STK31Q9BXU1 1019 aa12.15□□□□□ -0.46
TRAF1-203ENST00000546084 PANK2Q9BZ23 570 aa12.15□□□□□ -0.46
TRAF1-203ENST00000546084 TRAK2O60296 914 aa12.14□□□□□ -0.47
TRAF1-203ENST00000546084 C16orf71Q8IYS4 520 aaPredicted RBP12.14□□□□□ -0.47
TRAF1-203ENST00000546084 TBC1D32Q96NH3 1257 aa12.14□□□□□ -0.47
TRAF1-203ENST00000546084 LARP6Q9BRS8 491 aaKnown RBP12.14□□□□□ -0.47
TRAF1-203ENST00000546084 TSPYL4Q9UJ04 414 aa12.14□□□□□ -0.47
TRAF1-203ENST00000546084 WDR7Q9Y4E6 1490 aa12.14□□□□□ -0.47
TRAF1-203ENST00000546084 CASC1Q6TDU7 716 aa12.14□□□□□ -0.47
TRAF1-203ENST00000546084 RRAGDQ9NQL2 400 aaPredicted RBP12.14□□□□□ -0.47
TRAF1-203ENST00000546084 CHMP5Q9NZZ3 219 aa12.14□□□□□ -0.47
TRAF1-203ENST00000546084 NUP160Q12769 1436 aa12.14□□□□□ -0.47
TRAF1-203ENST00000546084 ASXL1Q8IXJ9 1541 aa12.14□□□□□ -0.47
TRAF1-203ENST00000546084 CHMP3Q9Y3E7 222 aa12.14□□□□□ -0.47
TRAF1-203ENST00000546084 DDX54Q8TDD1 881 aaKnown RBP12.13□□□□□ -0.47
TRAF1-203ENST00000546084 PTMAP06454 111 aaKnown RBP12.13□□□□□ -0.47
TRAF1-203ENST00000546084 TRPM1Q7Z4N2 1603 aa12.13□□□□□ -0.47
TRAF1-203ENST00000546084 WDR63Q8IWG1 891 aa12.13□□□□□ -0.47
TRAF1-203ENST00000546084 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRAF1-203ENST00000546084 EXOC6BQ9Y2D4 811 aa12.13□□□□□ -0.47
TRAF1-203ENST00000546084 DDX49Q9Y6V7 483 aaKnown RBP12.13□□□□□ -0.47
TRAF1-203ENST00000546084 XRCC6P12956 609 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAF1-203ENST00000546084 PIK3C2GO75747 1445 aa12.12□□□□□ -0.47
TRAF1-203ENST00000546084 AIMP1Q12904 312 aaKnown RBP12.12□□□□□ -0.47
TRAF1-203ENST00000546084 NUDT16Q96DE0 195 aaKnown RBP12.12□□□□□ -0.47
TRAF1-203ENST00000546084 FOXO3O43524 673 aa12.11□□□□□ -0.47
TRAF1-203ENST00000546084 ANXA1P04083 346 aa12.11□□□□□ -0.47
TRAF1-203ENST00000546084 IL1RAPL2Q9NP60 686 aa12.11□□□□□ -0.47
TRAF1-203ENST00000546084 CDC42BPAQ5VT25 1732 aa12.11□□□□□ -0.47
TRAF1-203ENST00000546084 CROCC2H7BZ55 1655 aa12.11□□□□□ -0.47
TRAF1-203ENST00000546084 HSP90AB2PQ58FF8 381 aa12.11□□□□□ -0.47
TRAF1-203ENST00000546084 ANO2Q9NQ90 1003 aa12.11□□□□□ -0.47
TRAF1-203ENST00000546084 C8orf58Q8NAV2 365 aa12.11□□□□□ -0.47
TRAF1-203ENST00000546084 PRDM15P57071 1507 aaPredicted RBP12.11□□□□□ -0.47
TRAF1-203ENST00000546084 CHD1LQ86WJ1 897 aa12.1□□□□□ -0.47
TRAF1-203ENST00000546084 GNAI1P63096 354 aa12.1□□□□□ -0.47
TRAF1-203ENST00000546084 MCTP1Q6DN14 999 aa12.1□□□□□ -0.47
TRAF1-203ENST00000546084 RNF214Q8ND24 703 aa12.1□□□□□ -0.47
TRAF1-203ENST00000546084 E9PCH4 1651 aa12.09□□□□□ -0.47
TRAF1-203ENST00000546084 KIF16BQ96L93 1317 aa12.09□□□□□ -0.47
TRAF1-203ENST00000546084 STAC3Q96MF2 364 aa12.09□□□□□ -0.47
TRAF1-203ENST00000546084 ASXL2Q76L83 1435 aa12.09□□□□□ -0.47
TRAF1-203ENST00000546084 DNTTIP2Q5QJE6 756 aaKnown RBP12.09□□□□□ -0.47
TRAF1-203ENST00000546084 NINLQ9Y2I6 1382 aa12.09□□□□□ -0.47
TRAF1-203ENST00000546084 CHD1O14646 1710 aa12.09□□□□□ -0.47
TRAF1-203ENST00000546084 CALD1Q05682 793 aaKnown RBP12.08□□□□□ -0.48
TRAF1-203ENST00000546084 MBIPQ9NS73 344 aa12.08□□□□□ -0.48
TRAF1-203ENST00000546084 CSB-PGBD3P0DP91 1061 aa12.08□□□□□ -0.48
TRAF1-203ENST00000546084 GBP4Q96PP9 640 aa12.08□□□□□ -0.48
TRAF1-203ENST00000546084 EID1Q9Y6B2 187 aa12.08□□□□□ -0.48
TRAF1-203ENST00000546084 ABTB2Q8N961 1025 aa12.07□□□□□ -0.48
TRAF1-203ENST00000546084 OTUD7AQ8TE49 926 aaPredicted RBP12.07□□□□□ -0.48
TRAF1-203ENST00000546084 ANTXR1Q9H6X2 564 aa12.07□□□□□ -0.48
TRAF1-203ENST00000546084 POLKQ9UBT6 870 aa12.07□□□□□ -0.48
TRAF1-203ENST00000546084 SAMD9LQ8IVG5 1584 aa12.07□□□□□ -0.48
TRAF1-203ENST00000546084 EIF2AK4Q9P2K8 1649 aaKnown RBP12.07□□□□□ -0.48
TRAF1-203ENST00000546084 DDX11L8A8MPP1 907 aa12.07□□□□□ -0.48
TRAF1-203ENST00000546084 AAMPQ13685 434 aa12.07□□□□□ -0.48
TRAF1-203ENST00000546084 RTEL1-TNFRSF6BF6WH68 1400 aa12.07□□□□□ -0.48
TRAF1-203ENST00000546084 MRE11P49959 708 aa12.07□□□□□ -0.48
TRAF1-203ENST00000546084 HDGFP51858 240 aaKnown RBP12.07□□□□□ -0.48
TRAF1-203ENST00000546084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRAF1-203ENST00000546084 FOSBP53539 338 aa12.06□□□□□ -0.48
TRAF1-203ENST00000546084 RBM10P98175 930 aaKnown RBP12.06□□□□□ -0.48
TRAF1-203ENST00000546084 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
TRAF1-203ENST00000546084 SLC52A1Q9NWF4 448 aa12.06□□□□□ -0.48
TRAF1-203ENST00000546084 NFE2L2Q16236 605 aa12.06□□□□□ -0.48
TRAF1-203ENST00000546084 CHAMP1Q96JM3 812 aa12.06□□□□□ -0.48
TRAF1-203ENST00000546084 A0A1W2PP64 1363 aa12.06□□□□□ -0.48
TRAF1-203ENST00000546084 ADCY10Q96PN6 1610 aa12.06□□□□□ -0.48
TRAF1-203ENST00000546084 FGD1P98174 961 aa12.06□□□□□ -0.48
TRAF1-203ENST00000546084 UPF3BQ9BZI7 483 aaKnown RBP12.06□□□□□ -0.48
TRAF1-203ENST00000546084 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
TRAF1-203ENST00000546084 HSP90AA2PQ14568 343 aaPredicted RBP12.05□□□□□ -0.48
TRAF1-203ENST00000546084 PAXIP1Q6ZW49 1069 aaPredicted RBP12.05□□□□□ -0.48
TRAF1-203ENST00000546084 GRPEL1Q9HAV7 217 aa12.05□□□□□ -0.48
TRAF1-203ENST00000546084 ARHGEF5Q12774 1597 aa12.05□□□□□ -0.48
TRAF1-203ENST00000546084 TTC37Q6PGP7 1564 aa12.05□□□□□ -0.48
TRAF1-203ENST00000546084 ABCA8O94911 1581 aa12.04□□□□□ -0.48
TRAF1-203ENST00000546084 NEK4P51957 841 aa12.04□□□□□ -0.48
TRAF1-203ENST00000546084 CCDC61Q9Y6R9 512 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms