RNA–Protein interactions for RNA: ENST00000545681.2

UBE2L3-204, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-204ENST00000545681 CABP1Q9NZU7 370 aa16.66■□□□□ 0.26
UBE2L3-204ENST00000545681 TMEM131LA2VDJ0 1609 aa16.66■□□□□ 0.26
UBE2L3-204ENST00000545681 DZIP1LQ8IYY4 767 aaKnown RBP16.66■□□□□ 0.26
UBE2L3-204ENST00000545681 RWDD1Q9H446 243 aaPredicted RBP16.66■□□□□ 0.26
UBE2L3-204ENST00000545681 ADGRB2O60241 1585 aa16.66■□□□□ 0.26
UBE2L3-204ENST00000545681 PREX1Q8TCU6 1659 aa16.64■□□□□ 0.25
UBE2L3-204ENST00000545681 DIAPH1O60610 1272 aaKnown RBP16.64■□□□□ 0.25
UBE2L3-204ENST00000545681 RIPK4P57078 832 aa16.64■□□□□ 0.25
UBE2L3-204ENST00000545681 CYB5RLQ6IPT4 315 aa16.64■□□□□ 0.25
UBE2L3-204ENST00000545681 CD163L1Q9NR16 1453 aa16.64■□□□□ 0.25
UBE2L3-204ENST00000545681 COL3A1P02461 1466 aaPredicted RBP16.64■□□□□ 0.25
UBE2L3-204ENST00000545681 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.63■□□□□ 0.25
UBE2L3-204ENST00000545681 SSH1Q8WYL5 1049 aa16.63■□□□□ 0.25
UBE2L3-204ENST00000545681 FBLN1P23142 703 aa16.63■□□□□ 0.25
UBE2L3-204ENST00000545681 CT47B1P0C2W7 299 aaPredicted RBP16.62■□□□□ 0.25
UBE2L3-204ENST00000545681 TRIM27P14373 513 aa16.62■□□□□ 0.25
UBE2L3-204ENST00000545681 NLRP1Q9C000 1473 aa16.61■□□□□ 0.25
UBE2L3-204ENST00000545681 WAPLQ7Z5K2 1190 aa16.61■□□□□ 0.25
UBE2L3-204ENST00000545681 ITPRIPQ8IWB1 547 aa16.61■□□□□ 0.25
UBE2L3-204ENST00000545681 ALKQ9UM73 1620 aa16.6■□□□□ 0.25
UBE2L3-204ENST00000545681 FRAT2O75474 233 aaPredicted RBP16.59■□□□□ 0.25
UBE2L3-204ENST00000545681 FAM69CQ0P6D2 419 aa16.59■□□□□ 0.25
UBE2L3-204ENST00000545681 NOB1Q9ULX3 412 aaKnown RBP16.59■□□□□ 0.25
UBE2L3-204ENST00000545681 ATF7IPQ6VMQ6 1270 aa16.59■□□□□ 0.25
UBE2L3-204ENST00000545681 UPF2Q9HAU5 1272 aaKnown RBP16.59■□□□□ 0.25
UBE2L3-204ENST00000545681 MED14O60244 1454 aa16.58■□□□□ 0.25
UBE2L3-204ENST00000545681 GSE1Q14687 1217 aa16.58■□□□□ 0.24
UBE2L3-204ENST00000545681 ARHGEF40Q8TER5 1519 aa16.58■□□□□ 0.24
UBE2L3-204ENST00000545681 MLECQ14165 292 aa16.58■□□□□ 0.24
UBE2L3-204ENST00000545681 VIRMAQ69YN4 1812 aaKnown RBP16.58■□□□□ 0.24
UBE2L3-204ENST00000545681 PNNQ9H307 717 aaKnown RBP16.57■□□□□ 0.24
UBE2L3-204ENST00000545681 IL16Q14005 1332 aa16.57■□□□□ 0.24
UBE2L3-204ENST00000545681 PRKAR2BP31323 418 aa16.57■□□□□ 0.24
UBE2L3-204ENST00000545681 DDX19BQ9UMR2 479 aa16.57■□□□□ 0.24
UBE2L3-204ENST00000545681 BECN1Q14457 450 aa16.56■□□□□ 0.24
UBE2L3-204ENST00000545681 PNPLA6Q8IY17 1366 aa16.56■□□□□ 0.24
UBE2L3-204ENST00000545681 CLTCQ00610 1675 aaKnown RBP16.56■□□□□ 0.24
UBE2L3-204ENST00000545681 TMEM57Q8N5G2 664 aa16.56■□□□□ 0.24
UBE2L3-204ENST00000545681 POLKQ9UBT6 870 aa16.56■□□□□ 0.24
UBE2L3-204ENST00000545681 HMOX1P09601 288 aa16.55■□□□□ 0.24
UBE2L3-204ENST00000545681 FCHSD2O94868 740 aa16.55■□□□□ 0.24
UBE2L3-204ENST00000545681 SLKQ9H2G2 1235 aaPredicted RBP16.55■□□□□ 0.24
UBE2L3-204ENST00000545681 ANKRD26Q9UPS8 1709 aa16.54■□□□□ 0.24
UBE2L3-204ENST00000545681 IL27Q8NEV9 243 aa16.53■□□□□ 0.24
UBE2L3-204ENST00000545681 TBC1D32Q96NH3 1257 aa16.53■□□□□ 0.24
UBE2L3-204ENST00000545681 RSPH6AQ9H0K4 717 aa16.53■□□□□ 0.24
UBE2L3-204ENST00000545681 ZMYM3Q14202 1370 aa16.53■□□□□ 0.24
UBE2L3-204ENST00000545681 THUMPD2Q9BTF0 503 aaKnown RBP16.52■□□□□ 0.24
UBE2L3-204ENST00000545681 KIF16BQ96L93 1317 aa16.52■□□□□ 0.24
UBE2L3-204ENST00000545681 HDAC1Q13547 482 aaPredicted RBP16.52■□□□□ 0.24
UBE2L3-204ENST00000545681 RIMS2Q9UQ26 1411 aa16.52■□□□□ 0.23
UBE2L3-204ENST00000545681 IPO8O15397 1037 aaKnown RBP16.52■□□□□ 0.23
UBE2L3-204ENST00000545681 PHACTR3Q96KR7 559 aa16.52■□□□□ 0.23
UBE2L3-204ENST00000545681 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.23
UBE2L3-204ENST00000545681 LRRC7Q96NW7 1537 aa16.51■□□□□ 0.23
UBE2L3-204ENST00000545681 A2ML1A8K2U0 1454 aa16.51■□□□□ 0.23
UBE2L3-204ENST00000545681 NME9Q86XW9 330 aa16.5■□□□□ 0.23
UBE2L3-204ENST00000545681 ZBTB40Q9NUA8 1239 aa16.5■□□□□ 0.23
UBE2L3-204ENST00000545681 ZRANB1Q9UGI0 708 aa16.5■□□□□ 0.23
UBE2L3-204ENST00000545681 MFAP1P55081 439 aaKnown RBP16.49■□□□□ 0.23
UBE2L3-204ENST00000545681 FAM135BQ49AJ0 1406 aa16.49■□□□□ 0.23
UBE2L3-204ENST00000545681 KIF20BQ96Q89 1820 aa16.49■□□□□ 0.23
UBE2L3-204ENST00000545681 ALDH1L2Q3SY69 923 aa16.49■□□□□ 0.23
UBE2L3-204ENST00000545681 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
UBE2L3-204ENST00000545681 NFE2L2Q16236 605 aa16.48■□□□□ 0.23
UBE2L3-204ENST00000545681 SMC5Q8IY18 1101 aa16.48■□□□□ 0.23
UBE2L3-204ENST00000545681 TBC1D2Q9BYX2 928 aa16.48■□□□□ 0.23
UBE2L3-204ENST00000545681 ATP7BP35670 1465 aa16.48■□□□□ 0.23
UBE2L3-204ENST00000545681 NCKAP5LQ9HCH0 1330 aa16.48■□□□□ 0.23
UBE2L3-204ENST00000545681 WASLO00401 505 aaPredicted RBP16.48■□□□□ 0.23
UBE2L3-204ENST00000545681 ELL2O00472 640 aaPredicted RBP16.48■□□□□ 0.23
UBE2L3-204ENST00000545681 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
UBE2L3-204ENST00000545681 PPP6R1Q9UPN7 881 aa16.47■□□□□ 0.23
UBE2L3-204ENST00000545681 PPIP5K1Q6PFW1 1433 aa16.47■□□□□ 0.23
UBE2L3-204ENST00000545681 TSPOAP1O95153 1857 aa16.46■□□□□ 0.23
UBE2L3-204ENST00000545681 DLC1Q96QB1 1528 aa16.46■□□□□ 0.23
UBE2L3-204ENST00000545681 SPRYD3Q8NCJ5 442 aa16.46■□□□□ 0.23
UBE2L3-204ENST00000545681 TSPYL6Q8N831 410 aa16.46■□□□□ 0.22
UBE2L3-204ENST00000545681 C22orf23Q9BZE7 217 aa16.46■□□□□ 0.22
UBE2L3-204ENST00000545681 METP08581 1390 aa16.45■□□□□ 0.22
UBE2L3-204ENST00000545681 IL13P35225 146 aa16.45■□□□□ 0.22
UBE2L3-204ENST00000545681 RRS1Q15050 365 aaKnown RBP16.45■□□□□ 0.22
UBE2L3-204ENST00000545681 LNPKQ9C0E8 428 aa16.45■□□□□ 0.22
UBE2L3-204ENST00000545681 CDC42BPGQ6DT37 1551 aa16.45■□□□□ 0.22
UBE2L3-204ENST00000545681 NUDT16Q96DE0 195 aaKnown RBP16.45■□□□□ 0.22
UBE2L3-204ENST00000545681 BRPF3Q9ULD4 1205 aa16.45■□□□□ 0.22
UBE2L3-204ENST00000545681 EDC4Q6P2E9 1401 aaKnown RBP16.44■□□□□ 0.22
UBE2L3-204ENST00000545681 VAMP4O75379 141 aa16.44■□□□□ 0.22
UBE2L3-204ENST00000545681 COG3Q96JB2 828 aa16.43■□□□□ 0.22
UBE2L3-204ENST00000545681 ANTXR1Q9H6X2 564 aa16.43■□□□□ 0.22
UBE2L3-204ENST00000545681 C1orf115Q9H7X2 142 aa16.43■□□□□ 0.22
UBE2L3-204ENST00000545681 SPATA31D1Q6ZQQ2 1576 aa16.43■□□□□ 0.22
UBE2L3-204ENST00000545681 CALD1Q05682 793 aaKnown RBP16.43■□□□□ 0.22
UBE2L3-204ENST00000545681 AGLP35573 1532 aa16.43■□□□□ 0.22
UBE2L3-204ENST00000545681 CPSF1Q10570 1443 aaKnown RBP16.43■□□□□ 0.22
UBE2L3-204ENST00000545681 DIP2BQ9P265 1576 aa16.43■□□□□ 0.22
UBE2L3-204ENST00000545681 GNAI1P63096 354 aa16.42■□□□□ 0.22
UBE2L3-204ENST00000545681 ESF1Q9H501 851 aaKnown RBP16.42■□□□□ 0.22
UBE2L3-204ENST00000545681 MBIPQ9NS73 344 aa16.42■□□□□ 0.22
UBE2L3-204ENST00000545681 NUCB1Q02818 461 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms