RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SIRT1Q96EB6 747 aa10.65□□□□□ -0.7
CPSF7-224ENST00000544990 KIF12Q96FN5 646 aa10.65□□□□□ -0.7
CPSF7-224ENST00000544990 TECPR2O15040 1411 aa10.65□□□□□ -0.7
CPSF7-224ENST00000544990 PHLPP1O60346 1717 aa10.64□□□□□ -0.71
CPSF7-224ENST00000544990 ASXL1Q8IXJ9 1541 aa10.63□□□□□ -0.71
CPSF7-224ENST00000544990 BRINP3Q76B58 766 aa10.63□□□□□ -0.71
CPSF7-224ENST00000544990 WAPLQ7Z5K2 1190 aa10.63□□□□□ -0.71
CPSF7-224ENST00000544990 IFNL1Q8IU54 200 aa10.63□□□□□ -0.71
CPSF7-224ENST00000544990 MST1RQ04912 1400 aa10.63□□□□□ -0.71
CPSF7-224ENST00000544990 NEUROD1Q13562 356 aa10.61□□□□□ -0.71
CPSF7-224ENST00000544990 SIN3AQ96ST3 1273 aa10.61□□□□□ -0.71
CPSF7-224ENST00000544990 POGKQ9P215 609 aa10.61□□□□□ -0.71
CPSF7-224ENST00000544990 AHDC1Q5TGY3 1603 aaPredicted RBP10.61□□□□□ -0.71
CPSF7-224ENST00000544990 PRAM1Q96QH2 718 aa10.6□□□□□ -0.71
CPSF7-224ENST00000544990 TRAK1Q9UPV9 953 aa10.6□□□□□ -0.71
CPSF7-224ENST00000544990 JCADQ9P266 1359 aa10.6□□□□□ -0.71
CPSF7-224ENST00000544990 C1orf167Q5SNV9 1468 aa10.6□□□□□ -0.71
CPSF7-224ENST00000544990 MED1Q15648 1581 aaPredicted RBP10.6□□□□□ -0.71
CPSF7-224ENST00000544990 CDC42BPGQ6DT37 1551 aa10.6□□□□□ -0.71
CPSF7-224ENST00000544990 DLC1Q96QB1 1528 aa10.59□□□□□ -0.71
CPSF7-224ENST00000544990 L3MBTL2Q969R5 705 aa10.59□□□□□ -0.71
CPSF7-224ENST00000544990 PLEKHH1Q9ULM0 1364 aa10.59□□□□□ -0.71
CPSF7-224ENST00000544990 ADGRB1O14514 1584 aa10.59□□□□□ -0.71
CPSF7-224ENST00000544990 COL16A1Q07092 1604 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-224ENST00000544990 KIAA1210Q9ULL0 1709 aa10.58□□□□□ -0.72
CPSF7-224ENST00000544990 SAFB2Q14151 953 aaKnown RBP eCLIP10.58□□□□□ -0.72
CPSF7-224ENST00000544990 ESCO1Q5FWF5 840 aa10.58□□□□□ -0.72
CPSF7-224ENST00000544990 LRRC59Q96AG4 307 aaKnown RBP10.58□□□□□ -0.72
CPSF7-224ENST00000544990 ORAI2Q96SN7 254 aa10.58□□□□□ -0.72
CPSF7-224ENST00000544990 NHSL1Q5SYE7 1610 aa10.58□□□□□ -0.72
CPSF7-224ENST00000544990 NBR1Q14596 966 aa10.57□□□□□ -0.72
CPSF7-224ENST00000544990 FMN2Q9NZ56 1722 aa10.56□□□□□ -0.72
CPSF7-224ENST00000544990 NUTM2FA1L443 756 aa10.56□□□□□ -0.72
CPSF7-224ENST00000544990 GOLGA2Q08379 1002 aa10.56□□□□□ -0.72
CPSF7-224ENST00000544990 PHF12Q96QT6 1004 aa10.56□□□□□ -0.72
CPSF7-224ENST00000544990 CABP2Q9NPB3 220 aa10.56□□□□□ -0.72
CPSF7-224ENST00000544990 SPATA31A6Q5VVP1 1343 aa10.56□□□□□ -0.72
CPSF7-224ENST00000544990 SHPRHQ149N8 1683 aa10.55□□□□□ -0.72
CPSF7-224ENST00000544990 SOX12O15370 315 aa10.55□□□□□ -0.72
CPSF7-224ENST00000544990 NPHP3Q7Z494 1330 aa10.55□□□□□ -0.72
CPSF7-224ENST00000544990 NLRP6P59044 892 aa10.54□□□□□ -0.72
CPSF7-224ENST00000544990 NBPF1Q3BBV0 1214 aa10.54□□□□□ -0.72
CPSF7-224ENST00000544990 ARHGEF28Q8N1W1 1705 aaKnown RBP10.54□□□□□ -0.72
CPSF7-224ENST00000544990 DDX17Q92841 729 aaKnown RBP10.54□□□□□ -0.72
CPSF7-224ENST00000544990 MINK1Q8N4C8 1332 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-224ENST00000544990 EIF3AQ14152 1382 aaKnown RBP10.53□□□□□ -0.72
CPSF7-224ENST00000544990 TONSLQ96HA7 1378 aa10.53□□□□□ -0.72
CPSF7-224ENST00000544990 RGPD8O14715 1765 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-224ENST00000544990 FOXO3O43524 673 aa10.53□□□□□ -0.72
CPSF7-224ENST00000544990 HIRIP3Q9BW71 556 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-224ENST00000544990 PCGF6Q9BYE7 350 aa10.53□□□□□ -0.72
CPSF7-224ENST00000544990 WDR70Q9NW82 654 aa10.53□□□□□ -0.72
CPSF7-224ENST00000544990 SOS2Q07890 1332 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-224ENST00000544990 ADGRB2O60241 1585 aa10.52□□□□□ -0.72
CPSF7-224ENST00000544990 WASLO00401 505 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-224ENST00000544990 MEX3CQ5U5Q3 659 aaKnown RBP10.52□□□□□ -0.73
CPSF7-224ENST00000544990 EFCAB3Q8N7B9 438 aa10.52□□□□□ -0.73
CPSF7-224ENST00000544990 KIF1AQ12756 1690 aa10.52□□□□□ -0.73
CPSF7-224ENST00000544990 ANKARQ7Z5J8 1434 aa10.51□□□□□ -0.73
CPSF7-224ENST00000544990 C19orf67A6NJJ6 358 aa10.51□□□□□ -0.73
CPSF7-224ENST00000544990 NUTM2BA6NNL0 878 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-224ENST00000544990 NUTM2EB1AL46 878 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-224ENST00000544990 NUTM2AQ8IVF1 878 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-224ENST00000544990 MFRPQ9BY79 579 aa10.51□□□□□ -0.73
CPSF7-224ENST00000544990 PHF8Q9UPP1 1060 aa10.51□□□□□ -0.73
CPSF7-224ENST00000544990 TRPM1Q7Z4N2 1603 aa10.51□□□□□ -0.73
CPSF7-224ENST00000544990 PSME1Q06323 249 aa10.5□□□□□ -0.73
CPSF7-224ENST00000544990 ROCK2O75116 1388 aaKnown RBP10.5□□□□□ -0.73
CPSF7-224ENST00000544990 PNPLA6Q8IY17 1366 aa10.5□□□□□ -0.73
CPSF7-224ENST00000544990 KRT28Q7Z3Y7 464 aa10.49□□□□□ -0.73
CPSF7-224ENST00000544990 CENPJQ9HC77 1338 aaPredicted RBP10.49□□□□□ -0.73
CPSF7-224ENST00000544990 TULP4Q9NRJ4 1543 aa10.48□□□□□ -0.73
CPSF7-224ENST00000544990 XPCQ01831 940 aaPredicted RBP10.48□□□□□ -0.73
CPSF7-224ENST00000544990 PMFBP1Q8TBY8 1022 aa10.48□□□□□ -0.73
CPSF7-224ENST00000544990 TMEM106CQ9BVX2 250 aa10.48□□□□□ -0.73
CPSF7-224ENST00000544990 CDK19Q9BWU1 502 aa10.48□□□□□ -0.73
CPSF7-224ENST00000544990 CLSPNQ9HAW4 1339 aa10.48□□□□□ -0.73
CPSF7-224ENST00000544990 PXDNQ92626 1479 aa10.48□□□□□ -0.73
CPSF7-224ENST00000544990 LRP6O75581 1613 aa10.47□□□□□ -0.73
CPSF7-224ENST00000544990 USP32Q8NFA0 1604 aa10.47□□□□□ -0.73
CPSF7-224ENST00000544990 NBPF8Q3BBV2 869 aa10.47□□□□□ -0.73
CPSF7-224ENST00000544990 NUDT16Q96DE0 195 aaKnown RBP10.47□□□□□ -0.73
CPSF7-224ENST00000544990 RGS17Q9UGC6 210 aaPredicted RBP10.47□□□□□ -0.73
CPSF7-224ENST00000544990 ITSN1Q15811 1721 aa10.47□□□□□ -0.73
CPSF7-224ENST00000544990 ZNF772Q68DY9 489 aaPredicted RBP10.46□□□□□ -0.73
CPSF7-224ENST00000544990 NGDNQ8NEJ9 315 aaKnown RBP10.46□□□□□ -0.73
CPSF7-224ENST00000544990 GPRASP1Q5JY77 1395 aa10.46□□□□□ -0.74
CPSF7-224ENST00000544990 QRICH2Q9H0J4 1663 aa10.45□□□□□ -0.74
CPSF7-224ENST00000544990 COL22A1Q8NFW1 1626 aaPredicted RBP10.45□□□□□ -0.74
CPSF7-224ENST00000544990 SPATA31A3Q5VYP0 1347 aa10.45□□□□□ -0.74
CPSF7-224ENST00000544990 PRR36Q9H6K5 1346 aa10.45□□□□□ -0.74
CPSF7-224ENST00000544990 SRPK2P78362 688 aaKnown RBP10.45□□□□□ -0.74
CPSF7-224ENST00000544990 MKRN3Q13064 507 aaKnown RBP10.45□□□□□ -0.74
CPSF7-224ENST00000544990 CARD11Q9BXL7 1154 aa10.45□□□□□ -0.74
CPSF7-224ENST00000544990 SBNO1A3KN83 1393 aa10.44□□□□□ -0.74
CPSF7-224ENST00000544990 ADAMTS2O95450 1211 aa10.44□□□□□ -0.74
CPSF7-224ENST00000544990 LMOD2Q6P5Q4 547 aa10.44□□□□□ -0.74
CPSF7-224ENST00000544990 MS4A3Q96HJ5 214 aa10.44□□□□□ -0.74
CPSF7-224ENST00000544990 C8orf37Q96NL8 207 aa10.44□□□□□ -0.74
CPSF7-224ENST00000544990 TIMELESSQ9UNS1 1208 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 418.8 ms