RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 C16orf71Q8IYS4 520 aaPredicted RBP16.33■□□□□ 0.2
PCMTD1-208ENST00000544451 ST18O60284 1047 aa16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 CDC45O75419 566 aa16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 GNAI1P63096 354 aa16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 FBXO31Q5XUX0 539 aaPredicted RBP16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 UGGT1Q9NYU2 1555 aa16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 POLR3AO14802 1390 aaPredicted RBP16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 K7ELQ4 463 aaPredicted RBP16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 FYB1O15117 783 aa16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 RBM10P98175 930 aaKnown RBP16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 TBC1D9Q6ZT07 1266 aa16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 TXNDC2Q86VQ3 553 aa16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 PLCH2O75038 1416 aa16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 TSHZ3Q63HK5 1081 aa16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 LMOD2Q6P5Q4 547 aa16.32■□□□□ 0.2
PCMTD1-208ENST00000544451 ATAD2Q6PL18 1390 aa16.31■□□□□ 0.2
PCMTD1-208ENST00000544451 KRT24Q2M2I5 525 aa16.31■□□□□ 0.2
PCMTD1-208ENST00000544451 ANO2Q9NQ90 1003 aa16.31■□□□□ 0.2
PCMTD1-208ENST00000544451 FAM13BQ9NYF5 915 aa16.31■□□□□ 0.2
PCMTD1-208ENST00000544451 NME9Q86XW9 330 aa16.31■□□□□ 0.2
PCMTD1-208ENST00000544451 PHACTR3Q96KR7 559 aa16.31■□□□□ 0.2
PCMTD1-208ENST00000544451 NUTM2GQ5VZR2 741 aa16.3■□□□□ 0.2
PCMTD1-208ENST00000544451 SULT6B1Q6IMI4 303 aa16.3■□□□□ 0.2
PCMTD1-208ENST00000544451 MCM10Q7L590 875 aa16.3■□□□□ 0.2
PCMTD1-208ENST00000544451 API5Q9BZZ5 524 aaKnown RBP16.3■□□□□ 0.2
PCMTD1-208ENST00000544451 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
PCMTD1-208ENST00000544451 NEK4P51957 841 aa16.29■□□□□ 0.2
PCMTD1-208ENST00000544451 SKOR2Q2VWA4 1001 aaPredicted RBP16.29■□□□□ 0.2
PCMTD1-208ENST00000544451 ADGRL1O94910 1474 aa16.29■□□□□ 0.2
PCMTD1-208ENST00000544451 TRIM35Q9UPQ4 493 aa16.28■□□□□ 0.2
PCMTD1-208ENST00000544451 CHMP3Q9Y3E7 222 aa16.28■□□□□ 0.2
PCMTD1-208ENST00000544451 KCNJ4P48050 445 aa16.28■□□□□ 0.2
PCMTD1-208ENST00000544451 TRPM1Q7Z4N2 1603 aa16.28■□□□□ 0.2
PCMTD1-208ENST00000544451 R3HCC1Q9Y3T6 440 aaKnown RBP16.28■□□□□ 0.2
PCMTD1-208ENST00000544451 POLR1AO95602 1720 aaPredicted RBP16.28■□□□□ 0.2
PCMTD1-208ENST00000544451 EIF2AK4Q9P2K8 1649 aaKnown RBP16.28■□□□□ 0.2
PCMTD1-208ENST00000544451 FANCAO15360 1455 aa16.28■□□□□ 0.2
PCMTD1-208ENST00000544451 STK31Q9BXU1 1019 aa16.27■□□□□ 0.2
PCMTD1-208ENST00000544451 NCKAP5LQ9HCH0 1330 aa16.27■□□□□ 0.19
PCMTD1-208ENST00000544451 ZBTB40Q9NUA8 1239 aa16.27■□□□□ 0.19
PCMTD1-208ENST00000544451 F6X3S4 739 aa16.26■□□□□ 0.19
PCMTD1-208ENST00000544451 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
PCMTD1-208ENST00000544451 GAS2L2Q8NHY3 880 aa16.26■□□□□ 0.19
PCMTD1-208ENST00000544451 GCC1Q96CN9 775 aa16.26■□□□□ 0.19
PCMTD1-208ENST00000544451 NUCB1Q02818 461 aa16.26■□□□□ 0.19
PCMTD1-208ENST00000544451 EXOC6BQ9Y2D4 811 aa16.26■□□□□ 0.19
PCMTD1-208ENST00000544451 PRDM15P57071 1507 aaPredicted RBP16.26■□□□□ 0.19
PCMTD1-208ENST00000544451 INSRP06213 1382 aa16.26■□□□□ 0.19
PCMTD1-208ENST00000544451 MAP4K4O95819 1239 aaPredicted RBP16.26■□□□□ 0.19
PCMTD1-208ENST00000544451 LMOD3Q0VAK6 560 aa16.26■□□□□ 0.19
PCMTD1-208ENST00000544451 FKBP5Q13451 457 aaPredicted RBP16.26■□□□□ 0.19
PCMTD1-208ENST00000544451 INTS3Q68E01 1043 aaKnown RBP16.26■□□□□ 0.19
PCMTD1-208ENST00000544451 MCCP23508 829 aa16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 HDAC1Q13547 482 aaPredicted RBP16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 CYB5RLQ6IPT4 315 aa16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 C8orf58Q8NAV2 365 aa16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 BCL11BQ9C0K0 894 aaPredicted RBP16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 ANTXR1Q9H6X2 564 aa16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 MBIPQ9NS73 344 aa16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 HMMRO75330 724 aa16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 FCHSD2O94868 740 aa16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 EIF2S2P20042 333 aaKnown RBP16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 NFE2L2Q16236 605 aa16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 CHAMP1Q96JM3 812 aa16.25■□□□□ 0.19
PCMTD1-208ENST00000544451 TTC37Q6PGP7 1564 aa16.24■□□□□ 0.19
PCMTD1-208ENST00000544451 AMPHP49418 695 aa16.24■□□□□ 0.19
PCMTD1-208ENST00000544451 LARP6Q9BRS8 491 aaKnown RBP16.24■□□□□ 0.19
PCMTD1-208ENST00000544451 RBM27Q9P2N5 1060 aaKnown RBP16.24■□□□□ 0.19
PCMTD1-208ENST00000544451 ABCA8O94911 1581 aa16.24■□□□□ 0.19
PCMTD1-208ENST00000544451 DTNBO60941 627 aa16.24■□□□□ 0.19
PCMTD1-208ENST00000544451 OTUD7AQ8TE49 926 aaPredicted RBP16.24■□□□□ 0.19
PCMTD1-208ENST00000544451 MAST1Q9Y2H9 1570 aa16.23■□□□□ 0.19
PCMTD1-208ENST00000544451 CT47B1P0C2W7 299 aaPredicted RBP16.23■□□□□ 0.19
PCMTD1-208ENST00000544451 SMC5Q8IY18 1101 aa16.23■□□□□ 0.19
PCMTD1-208ENST00000544451 TSPYL4Q9UJ04 414 aa16.23■□□□□ 0.19
PCMTD1-208ENST00000544451 ATP10AO60312 1499 aa16.23■□□□□ 0.19
PCMTD1-208ENST00000544451 CD2BP2O95400 341 aaKnown RBP16.23■□□□□ 0.19
PCMTD1-208ENST00000544451 ERVK-7P63135 1459 aa16.23■□□□□ 0.19
PCMTD1-208ENST00000544451 UPF3BQ9BZI7 483 aaKnown RBP16.23■□□□□ 0.19
PCMTD1-208ENST00000544451 PTPRTO14522 1441 aa16.23■□□□□ 0.19
PCMTD1-208ENST00000544451 A0A1W2PP64 1363 aa16.22■□□□□ 0.19
PCMTD1-208ENST00000544451 REC8O95072 547 aa16.22■□□□□ 0.19
PCMTD1-208ENST00000544451 KIAA1211Q6ZU35 1233 aa16.22■□□□□ 0.19
PCMTD1-208ENST00000544451 NGDNQ8NEJ9 315 aaKnown RBP16.22■□□□□ 0.19
PCMTD1-208ENST00000544451 GDPD2Q9HCC8 539 aa16.22■□□□□ 0.19
PCMTD1-208ENST00000544451 CCDC27Q2M243 656 aa16.21■□□□□ 0.19
PCMTD1-208ENST00000544451 BMP2KLQ5H9B9 411 aa16.21■□□□□ 0.19
PCMTD1-208ENST00000544451 NUCB2P80303 420 aa16.21■□□□□ 0.18
PCMTD1-208ENST00000544451 ADCY10Q96PN6 1610 aa16.2■□□□□ 0.18
PCMTD1-208ENST00000544451 PTMSP20962 102 aa16.2■□□□□ 0.18
PCMTD1-208ENST00000544451 AEBP1Q8IUX7 1158 aa16.2■□□□□ 0.18
PCMTD1-208ENST00000544451 IL1RAPL2Q9NP60 686 aa16.2■□□□□ 0.18
PCMTD1-208ENST00000544451 NAP1L2Q9ULW6 460 aaPredicted RBP16.2■□□□□ 0.18
PCMTD1-208ENST00000544451 CCDC9Q9Y3X0 531 aaKnown RBP16.2■□□□□ 0.18
PCMTD1-208ENST00000544451 ARHGEF5Q12774 1597 aa16.2■□□□□ 0.18
PCMTD1-208ENST00000544451 SYCE3A1L190 88 aa16.2■□□□□ 0.18
PCMTD1-208ENST00000544451 GAS2L3Q86XJ1 694 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms