RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 FYB1O15117 783 aa15.79■□□□□ 0.12
LRTOMT-221ENST00000544409 GSE1Q14687 1217 aa15.79■□□□□ 0.12
LRTOMT-221ENST00000544409 COL3A1P02461 1466 aaPredicted RBP15.79■□□□□ 0.12
LRTOMT-221ENST00000544409 NLRP1Q9C000 1473 aa15.78■□□□□ 0.12
LRTOMT-221ENST00000544409 U2SURPO15042 1029 aaKnown RBP15.77■□□□□ 0.12
LRTOMT-221ENST00000544409 FRAT1Q92837 279 aaPredicted RBP15.77■□□□□ 0.12
LRTOMT-221ENST00000544409 SETD1AO15047 1707 aaKnown RBP15.77■□□□□ 0.12
LRTOMT-221ENST00000544409 PPM1GO15355 546 aaPredicted RBP15.77■□□□□ 0.12
LRTOMT-221ENST00000544409 PANK1Q8TE04 598 aa15.77■□□□□ 0.12
LRTOMT-221ENST00000544409 FAM161AQ3B820 660 aa15.77■□□□□ 0.11
LRTOMT-221ENST00000544409 CLUAP1Q96AJ1 413 aa15.77■□□□□ 0.11
LRTOMT-221ENST00000544409 COG6Q9Y2V7 657 aa15.77■□□□□ 0.11
LRTOMT-221ENST00000544409 MLECQ14165 292 aa15.76■□□□□ 0.11
LRTOMT-221ENST00000544409 CABP1Q9NZU7 370 aa15.76■□□□□ 0.11
LRTOMT-221ENST00000544409 MAPK8IP3Q9UPT6 1336 aa15.75■□□□□ 0.11
LRTOMT-221ENST00000544409 AAMPQ13685 434 aa15.75■□□□□ 0.11
LRTOMT-221ENST00000544409 DDRGK1Q96HY6 314 aa15.75■□□□□ 0.11
LRTOMT-221ENST00000544409 PLEKHF1Q96S99 279 aa15.75■□□□□ 0.11
LRTOMT-221ENST00000544409 RGS3P49796 1198 aa15.74■□□□□ 0.11
LRTOMT-221ENST00000544409 ATP7BP35670 1465 aa15.74■□□□□ 0.11
LRTOMT-221ENST00000544409 IGHDP01880 384 aa15.73■□□□□ 0.11
LRTOMT-221ENST00000544409 RSPH6AQ9H0K4 717 aa15.73■□□□□ 0.11
LRTOMT-221ENST00000544409 PNNQ9H307 717 aaKnown RBP15.73■□□□□ 0.11
LRTOMT-221ENST00000544409 DIAPH1O60610 1272 aaKnown RBP15.73■□□□□ 0.11
LRTOMT-221ENST00000544409 CT47B1P0C2W7 299 aaPredicted RBP15.73■□□□□ 0.11
LRTOMT-221ENST00000544409 TMPOP42166 694 aaKnown RBP15.73■□□□□ 0.11
LRTOMT-221ENST00000544409 WAPLQ7Z5K2 1190 aa15.73■□□□□ 0.11
LRTOMT-221ENST00000544409 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.72■□□□□ 0.11
LRTOMT-221ENST00000544409 C8orf34Q49A92 452 aa15.72■□□□□ 0.11
LRTOMT-221ENST00000544409 ESF1Q9H501 851 aaKnown RBP15.72■□□□□ 0.11
LRTOMT-221ENST00000544409 PNPLA6Q8IY17 1366 aa15.71■□□□□ 0.11
LRTOMT-221ENST00000544409 BCL2L13Q9BXK5 485 aa15.71■□□□□ 0.11
LRTOMT-221ENST00000544409 NRXN3Q9Y4C0 1643 aa15.71■□□□□ 0.1
LRTOMT-221ENST00000544409 PMFBP1Q8TBY8 1022 aa15.7■□□□□ 0.1
LRTOMT-221ENST00000544409 IL16Q14005 1332 aa15.7■□□□□ 0.1
LRTOMT-221ENST00000544409 KIF13AQ9H1H9 1805 aa15.69■□□□□ 0.1
LRTOMT-221ENST00000544409 TRIM35Q9UPQ4 493 aa15.69■□□□□ 0.1
LRTOMT-221ENST00000544409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.69■□□□□ 0.1
LRTOMT-221ENST00000544409 CDC42BPGQ6DT37 1551 aa15.69■□□□□ 0.1
LRTOMT-221ENST00000544409 RLBP1P12271 317 aa15.69■□□□□ 0.1
LRTOMT-221ENST00000544409 ZMYM3Q14202 1370 aa15.68■□□□□ 0.1
LRTOMT-221ENST00000544409 VIRMAQ69YN4 1812 aaKnown RBP15.68■□□□□ 0.1
LRTOMT-221ENST00000544409 NFKBIBQ15653 356 aa15.68■□□□□ 0.1
LRTOMT-221ENST00000544409 TSR2Q969E8 191 aaKnown RBP15.68■□□□□ 0.1
LRTOMT-221ENST00000544409 ZKSCAN2Q63HK3 967 aa15.67■□□□□ 0.1
LRTOMT-221ENST00000544409 TNNQ9UQP3 1299 aa15.67■□□□□ 0.1
LRTOMT-221ENST00000544409 KNDC1Q76NI1 1749 aa15.67■□□□□ 0.1
LRTOMT-221ENST00000544409 HDGFP51858 240 aaKnown RBP15.67■□□□□ 0.1
LRTOMT-221ENST00000544409 RIPK4P57078 832 aa15.67■□□□□ 0.1
LRTOMT-221ENST00000544409 WASLO00401 505 aaPredicted RBP15.67■□□□□ 0.1
LRTOMT-221ENST00000544409 EXOSC9Q06265 439 aaKnown RBP15.67■□□□□ 0.1
LRTOMT-221ENST00000544409 METP08581 1390 aa15.66■□□□□ 0.1
LRTOMT-221ENST00000544409 MAP2P11137 1827 aaKnown RBP15.66■□□□□ 0.1
LRTOMT-221ENST00000544409 FCHSD2O94868 740 aa15.66■□□□□ 0.1
LRTOMT-221ENST00000544409 SLC4A3P48751 1232 aa15.66■□□□□ 0.1
LRTOMT-221ENST00000544409 VSIG10Q8N0Z9 540 aa15.66■□□□□ 0.1
LRTOMT-221ENST00000544409 EDC4Q6P2E9 1401 aaKnown RBP15.65■□□□□ 0.1
LRTOMT-221ENST00000544409 PPIP5K1Q6PFW1 1433 aa15.65■□□□□ 0.1
LRTOMT-221ENST00000544409 MVPQ14764 893 aaKnown RBP15.65■□□□□ 0.1
LRTOMT-221ENST00000544409 FTSJ3Q8IY81 847 aaKnown RBP15.65■□□□□ 0.1
LRTOMT-221ENST00000544409 SMC4Q9NTJ3 1288 aa15.65■□□□□ 0.1
LRTOMT-221ENST00000544409 POLKQ9UBT6 870 aa15.65■□□□□ 0.1
LRTOMT-221ENST00000544409 LRRC7Q96NW7 1537 aa15.65■□□□□ 0.1
LRTOMT-221ENST00000544409 CPSF1Q10570 1443 aaKnown RBP15.65■□□□□ 0.1
LRTOMT-221ENST00000544409 DZIP1LQ8IYY4 767 aaKnown RBP15.65■□□□□ 0.1
LRTOMT-221ENST00000544409 ZMYND15Q9H091 742 aa15.65■□□□□ 0.1
LRTOMT-221ENST00000544409 PCDHB15Q9Y5E8 787 aa15.65■□□□□ 0.1
LRTOMT-221ENST00000544409 FAM135BQ49AJ0 1406 aa15.64■□□□□ 0.09
LRTOMT-221ENST00000544409 SIRT1Q96EB6 747 aa15.64■□□□□ 0.09
LRTOMT-221ENST00000544409 TNRQ92752 1358 aa15.64■□□□□ 0.09
LRTOMT-221ENST00000544409 TXNDC2Q86VQ3 553 aa15.63■□□□□ 0.09
LRTOMT-221ENST00000544409 RWDD1Q9H446 243 aaPredicted RBP15.63■□□□□ 0.09
LRTOMT-221ENST00000544409 TECPR2O15040 1411 aa15.63■□□□□ 0.09
LRTOMT-221ENST00000544409 GLIPR1L2Q4G1C9 344 aa15.63■□□□□ 0.09
LRTOMT-221ENST00000544409 DAXXQ9UER7 740 aaPredicted RBP15.63■□□□□ 0.09
LRTOMT-221ENST00000544409 CPS1P31327 1500 aa15.62■□□□□ 0.09
LRTOMT-221ENST00000544409 PRKAR2BP31323 418 aa15.62■□□□□ 0.09
LRTOMT-221ENST00000544409 MON2Q7Z3U7 1717 aa15.62■□□□□ 0.09
LRTOMT-221ENST00000544409 SSH1Q8WYL5 1049 aa15.61■□□□□ 0.09
LRTOMT-221ENST00000544409 NUDT16Q96DE0 195 aaKnown RBP15.61■□□□□ 0.09
LRTOMT-221ENST00000544409 FAM43AQ8N2R8 423 aa15.61■□□□□ 0.09
LRTOMT-221ENST00000544409 ITSN1Q15811 1721 aa15.6■□□□□ 0.09
LRTOMT-221ENST00000544409 UBR1Q8IWV7 1749 aa15.6■□□□□ 0.09
LRTOMT-221ENST00000544409 FBLN1P23142 703 aa15.6■□□□□ 0.09
LRTOMT-221ENST00000544409 CDK12Q9NYV4 1490 aaPredicted RBP15.6■□□□□ 0.09
LRTOMT-221ENST00000544409 NME9Q86XW9 330 aa15.6■□□□□ 0.09
LRTOMT-221ENST00000544409 AKAP12Q02952 1782 aa15.6■□□□□ 0.09
LRTOMT-221ENST00000544409 AATKQ6ZMQ8 1374 aa15.59■□□□□ 0.09
LRTOMT-221ENST00000544409 CCDC61Q9Y6R9 512 aa15.59■□□□□ 0.09
LRTOMT-221ENST00000544409 TMEM2Q9UHN6 1383 aa15.59■□□□□ 0.09
LRTOMT-221ENST00000544409 TRIM27P14373 513 aa15.59■□□□□ 0.09
LRTOMT-221ENST00000544409 ATF7IPQ6VMQ6 1270 aa15.59■□□□□ 0.09
LRTOMT-221ENST00000544409 PDZRN3Q9UPQ7 1066 aa15.59■□□□□ 0.09
LRTOMT-221ENST00000544409 EMILIN1Q9Y6C2 1016 aa15.59■□□□□ 0.09
LRTOMT-221ENST00000544409 COG3Q96JB2 828 aa15.58■□□□□ 0.08
LRTOMT-221ENST00000544409 DDX19BQ9UMR2 479 aa15.58■□□□□ 0.08
LRTOMT-221ENST00000544409 KIF16BQ96L93 1317 aa15.58■□□□□ 0.08
LRTOMT-221ENST00000544409 NFE2L2Q16236 605 aa15.58■□□□□ 0.08
LRTOMT-221ENST00000544409 NOB1Q9ULX3 412 aaKnown RBP15.57■□□□□ 0.08
LRTOMT-221ENST00000544409 IPO8O15397 1037 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms