RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 TLL2Q9Y6L7 1015 aa8.32□□□□□ -1.08
CCDC170-203ENST00000544131 PCDHB15Q9Y5E8 787 aa8.31□□□□□ -1.08
CCDC170-203ENST00000544131 VEGFBP49765 207 aa8.3□□□□□ -1.08
CCDC170-203ENST00000544131 CSPP1Q1MSJ5 1256 aa8.3□□□□□ -1.08
CCDC170-203ENST00000544131 NPAS3Q8IXF0 933 aa8.3□□□□□ -1.08
CCDC170-203ENST00000544131 EVA1BQ9NVM1 165 aa8.3□□□□□ -1.08
CCDC170-203ENST00000544131 SPTLC1O15269 473 aa8.29□□□□□ -1.08
CCDC170-203ENST00000544131 MTMR2Q13614 643 aa8.29□□□□□ -1.08
CCDC170-203ENST00000544131 PRR7Q8TB68 274 aa8.29□□□□□ -1.08
CCDC170-203ENST00000544131 BAP1Q92560 729 aa8.29□□□□□ -1.08
CCDC170-203ENST00000544131 IRF7Q92985 503 aa8.29□□□□□ -1.08
CCDC170-203ENST00000544131 KDM4CQ9H3R0 1056 aa8.29□□□□□ -1.08
CCDC170-203ENST00000544131 GJA5P36382 358 aa8.28□□□□□ -1.08
CCDC170-203ENST00000544131 KCNH2Q12809 1159 aa8.28□□□□□ -1.08
CCDC170-203ENST00000544131 MYSM1Q5VVJ2 828 aa8.28□□□□□ -1.08
CCDC170-203ENST00000544131 ZNF511Q8NB15 262 aa8.28□□□□□ -1.08
CCDC170-203ENST00000544131 ZFP42Q96MM3 310 aa8.28□□□□□ -1.08
CCDC170-203ENST00000544131 FAM181BA6NEQ2 426 aa8.27□□□□□ -1.09
CCDC170-203ENST00000544131 H3BM21 787 aa8.27□□□□□ -1.09
CCDC170-203ENST00000544131 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
CCDC170-203ENST00000544131 TPRNQ4KMQ1 711 aa8.27□□□□□ -1.09
CCDC170-203ENST00000544131 CABLES1Q8TDN4 633 aa8.27□□□□□ -1.09
CCDC170-203ENST00000544131 POLR3EQ9NVU0 708 aa8.27□□□□□ -1.09
CCDC170-203ENST00000544131 LIMD1Q9UGP4 676 aa8.27□□□□□ -1.09
CCDC170-203ENST00000544131 ERBB4Q15303 1308 aa8.27□□□□□ -1.09
CCDC170-203ENST00000544131 SPDYE5A6NIY4 337 aa8.26□□□□□ -1.09
CCDC170-203ENST00000544131 HRCP23327 699 aa8.26□□□□□ -1.09
CCDC170-203ENST00000544131 NNTQ13423 1086 aa8.26□□□□□ -1.09
CCDC170-203ENST00000544131 ZSCAN1Q8NBB4 408 aa8.26□□□□□ -1.09
CCDC170-203ENST00000544131 RSPH6AQ9H0K4 717 aa8.26□□□□□ -1.09
CCDC170-203ENST00000544131 ZBTB3Q9H5J0 574 aa8.26□□□□□ -1.09
CCDC170-203ENST00000544131 PLEKHG3A1L390 1219 aa8.25□□□□□ -1.09
CCDC170-203ENST00000544131 NUTM2BA6NNL0 878 aaPredicted RBP8.25□□□□□ -1.09
CCDC170-203ENST00000544131 NUTM2EB1AL46 878 aaPredicted RBP8.25□□□□□ -1.09
CCDC170-203ENST00000544131 VARSP26640 1264 aaKnown RBP8.25□□□□□ -1.09
CCDC170-203ENST00000544131 NUTM2DQ5VT03 806 aaPredicted RBP8.25□□□□□ -1.09
CCDC170-203ENST00000544131 DESI1Q6ICB0 168 aa8.25□□□□□ -1.09
CCDC170-203ENST00000544131 NUTM2AQ8IVF1 878 aaPredicted RBP8.25□□□□□ -1.09
CCDC170-203ENST00000544131 FAM117AQ9C073 453 aa8.25□□□□□ -1.09
CCDC170-203ENST00000544131 ATP1B4Q9UN42 357 aaPredicted RBP8.25□□□□□ -1.09
CCDC170-203ENST00000544131 TIMP2P16035 220 aa8.24□□□□□ -1.09
CCDC170-203ENST00000544131 MPNDQ8N594 471 aa8.24□□□□□ -1.09
CCDC170-203ENST00000544131 CFAP99D6REC4 459 aa8.23□□□□□ -1.09
CCDC170-203ENST00000544131 ADH1CP00326 375 aa8.23□□□□□ -1.09
CCDC170-203ENST00000544131 QPCTQ16769 361 aa8.23□□□□□ -1.09
CCDC170-203ENST00000544131 PRPF38BQ5VTL8 546 aaKnown RBP8.23□□□□□ -1.09
CCDC170-203ENST00000544131 MRPL14Q6P1L8 145 aaKnown RBP8.23□□□□□ -1.09
CCDC170-203ENST00000544131 TSC1Q92574 1164 aa8.23□□□□□ -1.09
CCDC170-203ENST00000544131 CLK2P49760 499 aaKnown RBP8.22□□□□□ -1.09
CCDC170-203ENST00000544131 WDR4P57081 412 aaKnown RBP8.22□□□□□ -1.09
CCDC170-203ENST00000544131 SCARF1Q14162 830 aa8.22□□□□□ -1.09
CCDC170-203ENST00000544131 NEUROD2Q15784 382 aa8.22□□□□□ -1.09
CCDC170-203ENST00000544131 DDRGK1Q96HY6 314 aa8.22□□□□□ -1.09
CCDC170-203ENST00000544131 PURBQ96QR8 312 aaKnown RBP8.22□□□□□ -1.09
CCDC170-203ENST00000544131 CTHP32929 405 aa8.21□□□□□ -1.1
CCDC170-203ENST00000544131 SOBPA7XYQ1 873 aa8.2□□□□□ -1.1
CCDC170-203ENST00000544131 LILRB3O75022 631 aa8.2□□□□□ -1.1
CCDC170-203ENST00000544131 RTL5Q5HYW3 569 aaPredicted RBP8.2□□□□□ -1.1
CCDC170-203ENST00000544131 FAM174AQ8TBP5 190 aa8.2□□□□□ -1.1
CCDC170-203ENST00000544131 KLF16Q9BXK1 252 aaPredicted RBP8.2□□□□□ -1.1
CCDC170-203ENST00000544131 SKIV2LQ15477 1246 aaKnown RBP8.19□□□□□ -1.1
CCDC170-203ENST00000544131 TUSC1Q2TAM9 212 aa8.19□□□□□ -1.1
CCDC170-203ENST00000544131 LYPD8Q6UX82 237 aa8.19□□□□□ -1.1
CCDC170-203ENST00000544131 PROCA1Q8NCQ7 364 aaPredicted RBP8.19□□□□□ -1.1
CCDC170-203ENST00000544131 FOXJ1Q92949 421 aa8.19□□□□□ -1.1
CCDC170-203ENST00000544131 MAP10Q9P2G4 905 aa8.18□□□□□ -1.1
CCDC170-203ENST00000544131 VSIG8P0DPA2 414 aa8.17□□□□□ -1.1
CCDC170-203ENST00000544131 ARID5BQ14865 1188 aa8.17□□□□□ -1.1
CCDC170-203ENST00000544131 SH3D19Q5HYK7 790 aa8.17□□□□□ -1.1
CCDC170-203ENST00000544131 CDK15Q96Q40 435 aa8.17□□□□□ -1.1
CCDC170-203ENST00000544131 ZFAND3Q9H8U3 227 aa8.17□□□□□ -1.1
CCDC170-203ENST00000544131 PER1O15534 1290 aaPredicted RBP8.16□□□□□ -1.1
CCDC170-203ENST00000544131 ZIC2O95409 532 aaPredicted RBP8.16□□□□□ -1.1
CCDC170-203ENST00000544131 F12P00748 615 aaPredicted RBP8.16□□□□□ -1.1
CCDC170-203ENST00000544131 IL27Q8NEV9 243 aa8.16□□□□□ -1.1
CCDC170-203ENST00000544131 ITPKCQ96DU7 683 aa8.16□□□□□ -1.1
CCDC170-203ENST00000544131 NR3C2P08235 984 aa8.14□□□□□ -1.11
CCDC170-203ENST00000544131 BRPF1P55201 1214 aaPredicted RBP8.14□□□□□ -1.11
CCDC170-203ENST00000544131 C4orf48Q5BLP8 95 aa8.14□□□□□ -1.11
CCDC170-203ENST00000544131 C6orf118Q5T5N4 469 aa8.14□□□□□ -1.11
CCDC170-203ENST00000544131 HELBQ8NG08 1087 aaPredicted RBP8.14□□□□□ -1.11
CCDC170-203ENST00000544131 MAN1A2O60476 641 aa8.13□□□□□ -1.11
CCDC170-203ENST00000544131 NR5A1Q13285 461 aa8.13□□□□□ -1.11
CCDC170-203ENST00000544131 PRKCSHP14314 528 aaPredicted RBP8.12□□□□□ -1.11
CCDC170-203ENST00000544131 GRM5P41594 1212 aa8.12□□□□□ -1.11
CCDC170-203ENST00000544131 CTDSPL2Q05D32 466 aa8.12□□□□□ -1.11
CCDC170-203ENST00000544131 AGERQ15109 404 aa8.12□□□□□ -1.11
CCDC170-203ENST00000544131 FBXO31Q5XUX0 539 aaPredicted RBP8.12□□□□□ -1.11
CCDC170-203ENST00000544131 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.11□□□□□ -1.11
CCDC170-203ENST00000544131 BPHLQ86WA6 291 aaPredicted RBP8.1□□□□□ -1.11
CCDC170-203ENST00000544131 MEIOBQ8N635 442 aa8.1□□□□□ -1.11
CCDC170-203ENST00000544131 BMP2P12643 396 aa8.09□□□□□ -1.11
CCDC170-203ENST00000544131 LINC00528Q8N1L1 170 aa8.09□□□□□ -1.11
CCDC170-203ENST00000544131 PCMTD1Q96MG8 357 aaPredicted RBP8.09□□□□□ -1.11
CCDC170-203ENST00000544131 PPFIA3O75145 1194 aa8.08□□□□□ -1.12
CCDC170-203ENST00000544131 AP1G2O75843 785 aa8.08□□□□□ -1.12
CCDC170-203ENST00000544131 UPP2O95045 317 aa8.08□□□□□ -1.12
CCDC170-203ENST00000544131 FSHRP23945 695 aa8.08□□□□□ -1.12
CCDC170-203ENST00000544131 PPP2R2DQ66LE6 453 aa8.08□□□□□ -1.12
CCDC170-203ENST00000544131 C1QTNF2Q9BXJ5 285 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms