RNA–Protein interactions for RNA: ENST00000543382.6

BECN1-203, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 2,504 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-203ENST00000543382 NCBP3Q53F19 620 aaKnown RBP21.04■□□□□ 0.96
BECN1-203ENST00000543382 METP08581 1390 aa21.04■□□□□ 0.96
BECN1-203ENST00000543382 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.04■□□□□ 0.96
BECN1-203ENST00000543382 RLBP1P12271 317 aa21.02■□□□□ 0.96
BECN1-203ENST00000543382 TMPOP42166 694 aaKnown RBP21.02■□□□□ 0.96
BECN1-203ENST00000543382 RGS3P49796 1198 aa21.02■□□□□ 0.95
BECN1-203ENST00000543382 MYH16Q9H6N6 1097 aa21.02■□□□□ 0.95
BECN1-203ENST00000543382 TRIM35Q9UPQ4 493 aa21.02■□□□□ 0.95
BECN1-203ENST00000543382 PNPLA6Q8IY17 1366 aa21.01■□□□□ 0.95
BECN1-203ENST00000543382 TSR2Q969E8 191 aaKnown RBP21.01■□□□□ 0.95
BECN1-203ENST00000543382 CLUAP1Q96AJ1 413 aa21.01■□□□□ 0.95
BECN1-203ENST00000543382 ATP7BP35670 1465 aa21■□□□□ 0.95
BECN1-203ENST00000543382 DIAPH1O60610 1272 aaKnown RBP20.99■□□□□ 0.95
BECN1-203ENST00000543382 TXNDC2Q86VQ3 553 aa20.99■□□□□ 0.95
BECN1-203ENST00000543382 C8orf34Q49A92 452 aa20.99■□□□□ 0.95
BECN1-203ENST00000543382 ESF1Q9H501 851 aaKnown RBP20.99■□□□□ 0.95
BECN1-203ENST00000543382 MAPK8IP3Q9UPT6 1336 aa20.98■□□□□ 0.95
BECN1-203ENST00000543382 WASLO00401 505 aaPredicted RBP20.97■□□□□ 0.95
BECN1-203ENST00000543382 NBR1Q14596 966 aa20.97■□□□□ 0.95
BECN1-203ENST00000543382 POLKQ9UBT6 870 aa20.97■□□□□ 0.95
BECN1-203ENST00000543382 NCKAP5LQ9HCH0 1330 aa20.96■□□□□ 0.95
BECN1-203ENST00000543382 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.96■□□□□ 0.95
BECN1-203ENST00000543382 FAM161AQ3B820 660 aa20.96■□□□□ 0.95
BECN1-203ENST00000543382 PPM1GO15355 546 aaPredicted RBP20.95■□□□□ 0.94
BECN1-203ENST00000543382 PPIP5K1Q6PFW1 1433 aa20.95■□□□□ 0.94
BECN1-203ENST00000543382 EXOSC9Q06265 439 aaKnown RBP20.95■□□□□ 0.94
BECN1-203ENST00000543382 CPSF1Q10570 1443 aaKnown RBP20.95■□□□□ 0.94
BECN1-203ENST00000543382 MAP2P11137 1827 aaKnown RBP20.94■□□□□ 0.94
BECN1-203ENST00000543382 RIPK4P57078 832 aa20.94■□□□□ 0.94
BECN1-203ENST00000543382 LRRC7Q96NW7 1537 aa20.94■□□□□ 0.94
BECN1-203ENST00000543382 TNRQ92752 1358 aa20.93■□□□□ 0.94
BECN1-203ENST00000543382 ZRANB1Q9UGI0 708 aa20.93■□□□□ 0.94
BECN1-203ENST00000543382 PCDHB15Q9Y5E8 787 aa20.93■□□□□ 0.94
BECN1-203ENST00000543382 NME9Q86XW9 330 aa20.93■□□□□ 0.94
BECN1-203ENST00000543382 CDC42BPGQ6DT37 1551 aa20.92■□□□□ 0.94
BECN1-203ENST00000543382 KNDC1Q76NI1 1749 aa20.92■□□□□ 0.94
BECN1-203ENST00000543382 NUDT16Q96DE0 195 aaKnown RBP20.91■□□□□ 0.94
BECN1-203ENST00000543382 EMILIN1Q9Y6C2 1016 aa20.91■□□□□ 0.94
BECN1-203ENST00000543382 EDC4Q6P2E9 1401 aaKnown RBP20.9■□□□□ 0.94
BECN1-203ENST00000543382 UBR1Q8IWV7 1749 aa20.9■□□□□ 0.94
BECN1-203ENST00000543382 TECPR2O15040 1411 aa20.9■□□□□ 0.94
BECN1-203ENST00000543382 RSPH6AQ9H0K4 717 aa20.9■□□□□ 0.94
BECN1-203ENST00000543382 FAM135BQ49AJ0 1406 aa20.89■□□□□ 0.93
BECN1-203ENST00000543382 FCHSD2O94868 740 aa20.89■□□□□ 0.93
BECN1-203ENST00000543382 PRKAR2BP31323 418 aa20.89■□□□□ 0.93
BECN1-203ENST00000543382 CPS1P31327 1500 aa20.89■□□□□ 0.93
BECN1-203ENST00000543382 TMEM2Q9UHN6 1383 aa20.89■□□□□ 0.93
BECN1-203ENST00000543382 IL16Q14005 1332 aa20.88■□□□□ 0.93
BECN1-203ENST00000543382 CT47B1P0C2W7 299 aaPredicted RBP20.88■□□□□ 0.93
BECN1-203ENST00000543382 ZKSCAN2Q63HK3 967 aa20.88■□□□□ 0.93
BECN1-203ENST00000543382 SSH1Q8WYL5 1049 aa20.88■□□□□ 0.93
BECN1-203ENST00000543382 SMC4Q9NTJ3 1288 aa20.87■□□□□ 0.93
BECN1-203ENST00000543382 HMOX1P09601 288 aa20.87■□□□□ 0.93
BECN1-203ENST00000543382 MVPQ14764 893 aaKnown RBP20.86■□□□□ 0.93
BECN1-203ENST00000543382 PHACTR3Q96KR7 559 aa20.86■□□□□ 0.93
BECN1-203ENST00000543382 PRR36Q9H6K5 1346 aa20.86■□□□□ 0.93
BECN1-203ENST00000543382 PNNQ9H307 717 aaKnown RBP20.86■□□□□ 0.93
BECN1-203ENST00000543382 ROBO2Q9HCK4 1378 aa20.86■□□□□ 0.93
BECN1-203ENST00000543382 CCDC61Q9Y6R9 512 aa20.86■□□□□ 0.93
BECN1-203ENST00000543382 MON2Q7Z3U7 1717 aa20.86■□□□□ 0.93
BECN1-203ENST00000543382 HDGFP51858 240 aaKnown RBP20.85■□□□□ 0.93
BECN1-203ENST00000543382 SIRT1Q96EB6 747 aa20.85■□□□□ 0.93
BECN1-203ENST00000543382 ADAMTS13Q76LX8 1427 aa20.85■□□□□ 0.93
BECN1-203ENST00000543382 AAMPQ13685 434 aa20.85■□□□□ 0.93
BECN1-203ENST00000543382 DZIP1LQ8IYY4 767 aaKnown RBP20.85■□□□□ 0.93
BECN1-203ENST00000543382 PMFBP1Q8TBY8 1022 aa20.85■□□□□ 0.93
BECN1-203ENST00000543382 TRIM27P14373 513 aa20.84■□□□□ 0.93
BECN1-203ENST00000543382 IL13P35225 146 aa20.83■□□□□ 0.93
BECN1-203ENST00000543382 FTSJ3Q8IY81 847 aaKnown RBP20.83■□□□□ 0.93
BECN1-203ENST00000543382 VIRMAQ69YN4 1812 aaKnown RBP20.83■□□□□ 0.93
BECN1-203ENST00000543382 AKAP12Q02952 1782 aa20.83■□□□□ 0.93
BECN1-203ENST00000543382 LTKP29376 864 aa20.83■□□□□ 0.92
BECN1-203ENST00000543382 LAS1LQ9Y4W2 734 aaKnown RBP20.83■□□□□ 0.92
BECN1-203ENST00000543382 RRS1Q15050 365 aaKnown RBP20.82■□□□□ 0.92
BECN1-203ENST00000543382 DDRGK1Q96HY6 314 aa20.82■□□□□ 0.92
BECN1-203ENST00000543382 C3P01024 1663 aa20.82■□□□□ 0.92
BECN1-203ENST00000543382 CEBPAP49715 358 aaPredicted RBP20.82■□□□□ 0.92
BECN1-203ENST00000543382 CDK12Q9NYV4 1490 aaPredicted RBP20.82■□□□□ 0.92
BECN1-203ENST00000543382 NOB1Q9ULX3 412 aaKnown RBP20.81■□□□□ 0.92
BECN1-203ENST00000543382 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.81■□□□□ 0.92
BECN1-203ENST00000543382 THUMPD2Q9BTF0 503 aaKnown RBP20.81■□□□□ 0.92
BECN1-203ENST00000543382 AATKQ6ZMQ8 1374 aa20.81■□□□□ 0.92
BECN1-203ENST00000543382 ITSN1Q15811 1721 aa20.81■□□□□ 0.92
BECN1-203ENST00000543382 SLC4A3P48751 1232 aa20.8■□□□□ 0.92
BECN1-203ENST00000543382 COG3Q96JB2 828 aa20.8■□□□□ 0.92
BECN1-203ENST00000543382 NFE2L2Q16236 605 aa20.79■□□□□ 0.92
BECN1-203ENST00000543382 ATF7IPQ6VMQ6 1270 aa20.79■□□□□ 0.92
BECN1-203ENST00000543382 PDZRN3Q9UPQ7 1066 aa20.79■□□□□ 0.92
BECN1-203ENST00000543382 NUTM2FA1L443 756 aa20.77■□□□□ 0.92
BECN1-203ENST00000543382 SEC24BO95487 1268 aa20.77■□□□□ 0.92
BECN1-203ENST00000543382 RWDD1Q9H446 243 aaPredicted RBP20.77■□□□□ 0.92
BECN1-203ENST00000543382 NEFMP07197 916 aa20.77■□□□□ 0.92
BECN1-203ENST00000543382 PLEKHG1Q9ULL1 1385 aa20.77■□□□□ 0.91
BECN1-203ENST00000543382 ITPRIPQ8IWB1 547 aa20.76■□□□□ 0.91
BECN1-203ENST00000543382 USP19O94966 1318 aa20.76■□□□□ 0.91
BECN1-203ENST00000543382 TMEM57Q8N5G2 664 aa20.75■□□□□ 0.91
BECN1-203ENST00000543382 SLC26A8Q96RN1 970 aa20.75■□□□□ 0.91
BECN1-203ENST00000543382 PTPRUQ92729 1446 aa20.75■□□□□ 0.91
BECN1-203ENST00000543382 ZNF692Q9BU19 519 aaPredicted RBP20.75■□□□□ 0.91
BECN1-203ENST00000543382 DLG5Q8TDM6 1919 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms