RNA–Protein interactions for RNA: ENST00000542862.1

ERVFRD-1-202, Transcript of endogenous retrovirus group FRD member 1, envelope, humanhuman

APPRIS P1 BASIC

Gene ERVFRD-1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-1-202ENST00000542862 ALKQ9UM73 1620 aa10.24□□□□□ -0.77
ERVFRD-1-202ENST00000542862 ZFYVE9O95405 1425 aa10.24□□□□□ -0.77
ERVFRD-1-202ENST00000542862 CEBPAP49715 358 aaPredicted RBP10.24□□□□□ -0.77
ERVFRD-1-202ENST00000542862 METP08581 1390 aa10.23□□□□□ -0.77
ERVFRD-1-202ENST00000542862 MAPK8IP3Q9UPT6 1336 aa10.23□□□□□ -0.77
ERVFRD-1-202ENST00000542862 DIAPH1O60610 1272 aaKnown RBP10.23□□□□□ -0.77
ERVFRD-1-202ENST00000542862 PDE3AQ14432 1141 aa10.23□□□□□ -0.77
ERVFRD-1-202ENST00000542862 PUS7Q96PZ0 661 aaKnown RBP10.23□□□□□ -0.77
ERVFRD-1-202ENST00000542862 IQSEC2Q5JU85 1478 aa10.23□□□□□ -0.77
ERVFRD-1-202ENST00000542862 RIMS2Q9UQ26 1411 aa10.23□□□□□ -0.77
ERVFRD-1-202ENST00000542862 SEC24BO95487 1268 aa10.23□□□□□ -0.77
ERVFRD-1-202ENST00000542862 PHACTR3Q96KR7 559 aa10.23□□□□□ -0.77
ERVFRD-1-202ENST00000542862 POLKQ9UBT6 870 aa10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 DIP2BQ9P265 1576 aa10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 CLTCQ00610 1675 aaKnown RBP10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 ATAD2Q6PL18 1390 aa10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 ELL2O00472 640 aaPredicted RBP10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 SOX12O15370 315 aa10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 DEKP35659 375 aaKnown RBP10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 RRS1Q15050 365 aaKnown RBP10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 FAM161AQ3B820 660 aa10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 PRKAR2BP31323 418 aa10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 NGEFQ8N5V2 710 aa10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 SSH1Q8WYL5 1049 aa10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 SMC4Q9NTJ3 1288 aa10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 A2ML1A8K2U0 1454 aa10.22□□□□□ -0.77
ERVFRD-1-202ENST00000542862 MYH16Q9H6N6 1097 aa10.21□□□□□ -0.78
ERVFRD-1-202ENST00000542862 ARHGEF40Q8TER5 1519 aa10.2□□□□□ -0.78
ERVFRD-1-202ENST00000542862 CCDC27Q2M243 656 aa10.2□□□□□ -0.78
ERVFRD-1-202ENST00000542862 NSD2O96028 1365 aa10.2□□□□□ -0.78
ERVFRD-1-202ENST00000542862 ZMYM3Q14202 1370 aa10.2□□□□□ -0.78
ERVFRD-1-202ENST00000542862 NLRP1Q9C000 1473 aa10.2□□□□□ -0.78
ERVFRD-1-202ENST00000542862 NUDT16Q96DE0 195 aaKnown RBP10.2□□□□□ -0.78
ERVFRD-1-202ENST00000542862 WASLO00401 505 aaPredicted RBP10.19□□□□□ -0.78
ERVFRD-1-202ENST00000542862 SLC26A8Q96RN1 970 aa10.19□□□□□ -0.78
ERVFRD-1-202ENST00000542862 FTSJ3Q8IY81 847 aaKnown RBP10.19□□□□□ -0.78
ERVFRD-1-202ENST00000542862 NOB1Q9ULX3 412 aaKnown RBP10.19□□□□□ -0.78
ERVFRD-1-202ENST00000542862 PDZRN3Q9UPQ7 1066 aa10.19□□□□□ -0.78
ERVFRD-1-202ENST00000542862 TRIM27P14373 513 aa10.18□□□□□ -0.78
ERVFRD-1-202ENST00000542862 BCL11AQ9H165 835 aa10.18□□□□□ -0.78
ERVFRD-1-202ENST00000542862 COL3A1P02461 1466 aaPredicted RBP10.18□□□□□ -0.78
ERVFRD-1-202ENST00000542862 DCTN1Q14203 1278 aa10.18□□□□□ -0.78
ERVFRD-1-202ENST00000542862 ZKSCAN2Q63HK3 967 aa10.18□□□□□ -0.78
ERVFRD-1-202ENST00000542862 USP32Q8NFA0 1604 aa10.18□□□□□ -0.78
ERVFRD-1-202ENST00000542862 FAM83GA6ND36 823 aa10.18□□□□□ -0.78
ERVFRD-1-202ENST00000542862 NEFMP07197 916 aa10.18□□□□□ -0.78
ERVFRD-1-202ENST00000542862 ITPRIPQ8IWB1 547 aa10.18□□□□□ -0.78
ERVFRD-1-202ENST00000542862 DZIP1LQ8IYY4 767 aaKnown RBP10.18□□□□□ -0.78
ERVFRD-1-202ENST00000542862 LTKP29376 864 aa10.17□□□□□ -0.78
ERVFRD-1-202ENST00000542862 TSPYL6Q8N831 410 aa10.17□□□□□ -0.78
ERVFRD-1-202ENST00000542862 RSPH6AQ9H0K4 717 aa10.17□□□□□ -0.78
ERVFRD-1-202ENST00000542862 PRR36Q9H6K5 1346 aa10.17□□□□□ -0.78
ERVFRD-1-202ENST00000542862 PPIP5K1Q6PFW1 1433 aa10.16□□□□□ -0.78
ERVFRD-1-202ENST00000542862 MVPQ14764 893 aaKnown RBP10.16□□□□□ -0.78
ERVFRD-1-202ENST00000542862 RTL5Q5HYW3 569 aaPredicted RBP10.16□□□□□ -0.78
ERVFRD-1-202ENST00000542862 TMEM57Q8N5G2 664 aa10.16□□□□□ -0.78
ERVFRD-1-202ENST00000542862 NINLQ9Y2I6 1382 aa10.15□□□□□ -0.78
ERVFRD-1-202ENST00000542862 AEBP1Q8IUX7 1158 aa10.15□□□□□ -0.78
ERVFRD-1-202ENST00000542862 USP19O94966 1318 aa10.14□□□□□ -0.79
ERVFRD-1-202ENST00000542862 FCHSD2O94868 740 aa10.14□□□□□ -0.79
ERVFRD-1-202ENST00000542862 IL13P35225 146 aa10.14□□□□□ -0.79
ERVFRD-1-202ENST00000542862 PMFBP1Q8TBY8 1022 aa10.14□□□□□ -0.79
ERVFRD-1-202ENST00000542862 C1orf115Q9H7X2 142 aa10.14□□□□□ -0.79
ERVFRD-1-202ENST00000542862 CCDC61Q9Y6R9 512 aa10.14□□□□□ -0.79
ERVFRD-1-202ENST00000542862 PNPLA6Q8IY17 1366 aa10.14□□□□□ -0.79
ERVFRD-1-202ENST00000542862 ATF7IPQ6VMQ6 1270 aa10.14□□□□□ -0.79
ERVFRD-1-202ENST00000542862 COG3Q96JB2 828 aa10.14□□□□□ -0.79
ERVFRD-1-202ENST00000542862 DAXXQ9UER7 740 aaPredicted RBP10.14□□□□□ -0.79
ERVFRD-1-202ENST00000542862 CPS1P31327 1500 aa10.13□□□□□ -0.79
ERVFRD-1-202ENST00000542862 ROBO2Q9HCK4 1378 aa10.13□□□□□ -0.79
ERVFRD-1-202ENST00000542862 KRT24Q2M2I5 525 aa10.13□□□□□ -0.79
ERVFRD-1-202ENST00000542862 RWDD1Q9H446 243 aaPredicted RBP10.13□□□□□ -0.79
ERVFRD-1-202ENST00000542862 ADGRB2O60241 1585 aa10.13□□□□□ -0.79
ERVFRD-1-202ENST00000542862 MAP2P11137 1827 aaKnown RBP10.13□□□□□ -0.79
ERVFRD-1-202ENST00000542862 SPATA31D1Q6ZQQ2 1576 aa10.12□□□□□ -0.79
ERVFRD-1-202ENST00000542862 TNRQ92752 1358 aa10.12□□□□□ -0.79
ERVFRD-1-202ENST00000542862 NFE2L2Q16236 605 aa10.12□□□□□ -0.79
ERVFRD-1-202ENST00000542862 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.12□□□□□ -0.79
ERVFRD-1-202ENST00000542862 DDRGK1Q96HY6 314 aa10.12□□□□□ -0.79
ERVFRD-1-202ENST00000542862 AGLP35573 1532 aa10.12□□□□□ -0.79
ERVFRD-1-202ENST00000542862 LRRC7Q96NW7 1537 aa10.12□□□□□ -0.79
ERVFRD-1-202ENST00000542862 RBM33Q96EV2 1170 aaKnown RBP10.12□□□□□ -0.79
ERVFRD-1-202ENST00000542862 C8orf58Q8NAV2 365 aa10.11□□□□□ -0.79
ERVFRD-1-202ENST00000542862 HSP90AB2PQ58FF8 381 aa10.11□□□□□ -0.79
ERVFRD-1-202ENST00000542862 MBIPQ9NS73 344 aa10.11□□□□□ -0.79
ERVFRD-1-202ENST00000542862 ACEP12821 1306 aa10.1□□□□□ -0.79
ERVFRD-1-202ENST00000542862 NRXN3Q9Y4C0 1643 aa10.1□□□□□ -0.79
ERVFRD-1-202ENST00000542862 NUTM2GQ5VZR2 741 aa10.1□□□□□ -0.79
ERVFRD-1-202ENST00000542862 SULT6B1Q6IMI4 303 aa10.1□□□□□ -0.79
ERVFRD-1-202ENST00000542862 SPRYD3Q8NCJ5 442 aa10.1□□□□□ -0.79
ERVFRD-1-202ENST00000542862 VAMP4O75379 141 aa10.1□□□□□ -0.79
ERVFRD-1-202ENST00000542862 PLEKHG5O94827 1062 aa10.1□□□□□ -0.79
ERVFRD-1-202ENST00000542862 CPSF1Q10570 1443 aaKnown RBP10.1□□□□□ -0.79
ERVFRD-1-202ENST00000542862 MIS18AQ9NYP9 233 aa10.1□□□□□ -0.79
ERVFRD-1-202ENST00000542862 TMEM2Q9UHN6 1383 aa10.09□□□□□ -0.79
ERVFRD-1-202ENST00000542862 SETD1AO15047 1707 aaKnown RBP10.09□□□□□ -0.79
ERVFRD-1-202ENST00000542862 NFKBIBQ15653 356 aa10.09□□□□□ -0.79
ERVFRD-1-202ENST00000542862 MCM10Q7L590 875 aa10.09□□□□□ -0.79
ERVFRD-1-202ENST00000542862 MED14O60244 1454 aa10.09□□□□□ -0.79
ERVFRD-1-202ENST00000542862 FAM135BQ49AJ0 1406 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms