RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 MINK1Q8N4C8 1332 aaPredicted RBP8.48□□□□□ -1.05
PTPRO-208ENST00000542557 PNPLA6Q8IY17 1366 aa8.48□□□□□ -1.05
PTPRO-208ENST00000542557 KIF13AQ9H1H9 1805 aa8.48□□□□□ -1.05
PTPRO-208ENST00000542557 HDGFL2Q7Z4V5 671 aaPredicted RBP8.47□□□□□ -1.05
PTPRO-208ENST00000542557 CT47B1P0C2W7 299 aaPredicted RBP8.47□□□□□ -1.05
PTPRO-208ENST00000542557 RARSP54136 660 aaKnown RBP8.47□□□□□ -1.05
PTPRO-208ENST00000542557 MYH16Q9H6N6 1097 aa8.47□□□□□ -1.05
PTPRO-208ENST00000542557 STAG3Q9UJ98 1225 aa8.47□□□□□ -1.05
PTPRO-208ENST00000542557 VIRMAQ69YN4 1812 aaKnown RBP8.47□□□□□ -1.05
PTPRO-208ENST00000542557 FYB1O15117 783 aa8.47□□□□□ -1.05
PTPRO-208ENST00000542557 U2AF1L5P0DN76 240 aaPredicted RBP8.47□□□□□ -1.05
PTPRO-208ENST00000542557 U2AF1Q01081 240 aaKnown RBP eCLIP8.47□□□□□ -1.05
PTPRO-208ENST00000542557 RRP7AQ9Y3A4 280 aaKnown RBP8.46□□□□□ -1.06
PTPRO-208ENST00000542557 PLEKHF1Q96S99 279 aa8.46□□□□□ -1.06
PTPRO-208ENST00000542557 CDK19Q9BWU1 502 aa8.46□□□□□ -1.06
PTPRO-208ENST00000542557 TECPR2O15040 1411 aa8.46□□□□□ -1.06
PTPRO-208ENST00000542557 CPS1P31327 1500 aa8.45□□□□□ -1.06
PTPRO-208ENST00000542557 NEUROD2Q15784 382 aa8.45□□□□□ -1.06
PTPRO-208ENST00000542557 FAM161AQ3B820 660 aa8.45□□□□□ -1.06
PTPRO-208ENST00000542557 CLUAP1Q96AJ1 413 aa8.45□□□□□ -1.06
PTPRO-208ENST00000542557 GGNBP2Q9H3C7 697 aa8.45□□□□□ -1.06
PTPRO-208ENST00000542557 CANXP27824 592 aaKnown RBP8.45□□□□□ -1.06
PTPRO-208ENST00000542557 IL16Q14005 1332 aa8.45□□□□□ -1.06
PTPRO-208ENST00000542557 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTPRO-208ENST00000542557 DDRGK1Q96HY6 314 aa8.45□□□□□ -1.06
PTPRO-208ENST00000542557 FAM135BQ49AJ0 1406 aa8.44□□□□□ -1.06
PTPRO-208ENST00000542557 ZMYM3Q14202 1370 aa8.44□□□□□ -1.06
PTPRO-208ENST00000542557 SKAP1Q86WV1 359 aa8.44□□□□□ -1.06
PTPRO-208ENST00000542557 PNNQ9H307 717 aaKnown RBP8.44□□□□□ -1.06
PTPRO-208ENST00000542557 MON2Q7Z3U7 1717 aa8.44□□□□□ -1.06
PTPRO-208ENST00000542557 CPSF1Q10570 1443 aaKnown RBP8.44□□□□□ -1.06
PTPRO-208ENST00000542557 EDC4Q6P2E9 1401 aaKnown RBP8.44□□□□□ -1.06
PTPRO-208ENST00000542557 C8orf34Q49A92 452 aa8.43□□□□□ -1.06
PTPRO-208ENST00000542557 SIRT1Q96EB6 747 aa8.43□□□□□ -1.06
PTPRO-208ENST00000542557 LRRC7Q96NW7 1537 aa8.43□□□□□ -1.06
PTPRO-208ENST00000542557 MAPK8IP3Q9UPT6 1336 aa8.43□□□□□ -1.06
PTPRO-208ENST00000542557 CABP1Q9NZU7 370 aa8.43□□□□□ -1.06
PTPRO-208ENST00000542557 DIAPH1O60610 1272 aaKnown RBP8.43□□□□□ -1.06
PTPRO-208ENST00000542557 TMPOP42166 694 aaKnown RBP8.43□□□□□ -1.06
PTPRO-208ENST00000542557 PANK1Q8TE04 598 aa8.43□□□□□ -1.06
PTPRO-208ENST00000542557 UBR1Q8IWV7 1749 aa8.42□□□□□ -1.06
PTPRO-208ENST00000542557 PMFBP1Q8TBY8 1022 aa8.42□□□□□ -1.06
PTPRO-208ENST00000542557 COG6Q9Y2V7 657 aa8.42□□□□□ -1.06
PTPRO-208ENST00000542557 AKAP12Q02952 1782 aa8.42□□□□□ -1.06
PTPRO-208ENST00000542557 CDK12Q9NYV4 1490 aaPredicted RBP8.42□□□□□ -1.06
PTPRO-208ENST00000542557 U2SURPO15042 1029 aaKnown RBP8.42□□□□□ -1.06
PTPRO-208ENST00000542557 PIAS4Q8N2W9 510 aaPredicted RBP8.42□□□□□ -1.06
PTPRO-208ENST00000542557 TRIM35Q9UPQ4 493 aa8.42□□□□□ -1.06
PTPRO-208ENST00000542557 IGHDP01880 384 aa8.41□□□□□ -1.06
PTPRO-208ENST00000542557 FRAT1Q92837 279 aaPredicted RBP8.41□□□□□ -1.06
PTPRO-208ENST00000542557 ITSN1Q15811 1721 aa8.41□□□□□ -1.06
PTPRO-208ENST00000542557 PPIP5K1Q6PFW1 1433 aa8.41□□□□□ -1.06
PTPRO-208ENST00000542557 C3P01024 1663 aa8.41□□□□□ -1.06
PTPRO-208ENST00000542557 METP08581 1390 aa8.41□□□□□ -1.06
PTPRO-208ENST00000542557 AATKQ6ZMQ8 1374 aa8.41□□□□□ -1.06
PTPRO-208ENST00000542557 TNRQ92752 1358 aa8.41□□□□□ -1.06
PTPRO-208ENST00000542557 WASLO00401 505 aaPredicted RBP8.4□□□□□ -1.06
PTPRO-208ENST00000542557 FCHSD2O94868 740 aa8.4□□□□□ -1.06
PTPRO-208ENST00000542557 HDGFP51858 240 aaKnown RBP8.4□□□□□ -1.06
PTPRO-208ENST00000542557 WAPLQ7Z5K2 1190 aa8.4□□□□□ -1.06
PTPRO-208ENST00000542557 RLBP1P12271 317 aa8.4□□□□□ -1.06
PTPRO-208ENST00000542557 MAP2P11137 1827 aaKnown RBP8.4□□□□□ -1.06
PTPRO-208ENST00000542557 ZKSCAN2Q63HK3 967 aa8.4□□□□□ -1.07
PTPRO-208ENST00000542557 TMEM2Q9UHN6 1383 aa8.4□□□□□ -1.07
PTPRO-208ENST00000542557 TOPAZ1Q8N9V7 1692 aa8.39□□□□□ -1.07
PTPRO-208ENST00000542557 RGS3P49796 1198 aa8.39□□□□□ -1.07
PTPRO-208ENST00000542557 MLECQ14165 292 aa8.39□□□□□ -1.07
PTPRO-208ENST00000542557 MVPQ14764 893 aaKnown RBP8.39□□□□□ -1.07
PTPRO-208ENST00000542557 ESF1Q9H501 851 aaKnown RBP8.39□□□□□ -1.07
PTPRO-208ENST00000542557 POLKQ9UBT6 870 aa8.39□□□□□ -1.07
PTPRO-208ENST00000542557 NRKQ7Z2Y5 1582 aa8.39□□□□□ -1.07
PTPRO-208ENST00000542557 RSPH6AQ9H0K4 717 aa8.39□□□□□ -1.07
PTPRO-208ENST00000542557 RIPK4P57078 832 aa8.38□□□□□ -1.07
PTPRO-208ENST00000542557 EXOSC9Q06265 439 aaKnown RBP8.38□□□□□ -1.07
PTPRO-208ENST00000542557 TSR2Q969E8 191 aaKnown RBP8.38□□□□□ -1.07
PTPRO-208ENST00000542557 DZIP1LQ8IYY4 767 aaKnown RBP8.38□□□□□ -1.07
PTPRO-208ENST00000542557 ZNF428Q96B54 188 aa8.38□□□□□ -1.07
PTPRO-208ENST00000542557 BCL2L13Q9BXK5 485 aa8.38□□□□□ -1.07
PTPRO-208ENST00000542557 PPM1GO15355 546 aaPredicted RBP8.37□□□□□ -1.07
PTPRO-208ENST00000542557 SMC4Q9NTJ3 1288 aa8.37□□□□□ -1.07
PTPRO-208ENST00000542557 USP35Q9P2H5 1018 aa8.37□□□□□ -1.07
PTPRO-208ENST00000542557 TNNQ9UQP3 1299 aa8.37□□□□□ -1.07
PTPRO-208ENST00000542557 PCDHB15Q9Y5E8 787 aa8.37□□□□□ -1.07
PTPRO-208ENST00000542557 ADAMTS13Q76LX8 1427 aa8.37□□□□□ -1.07
PTPRO-208ENST00000542557 KIF16BQ96L93 1317 aa8.37□□□□□ -1.07
PTPRO-208ENST00000542557 NBR1Q14596 966 aa8.37□□□□□ -1.07
PTPRO-208ENST00000542557 RTL5Q5HYW3 569 aaPredicted RBP8.37□□□□□ -1.07
PTPRO-208ENST00000542557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTPRO-208ENST00000542557 FTSJ3Q8IY81 847 aaKnown RBP8.37□□□□□ -1.07
PTPRO-208ENST00000542557 RWDD1Q9H446 243 aaPredicted RBP8.37□□□□□ -1.07
PTPRO-208ENST00000542557 CCDC61Q9Y6R9 512 aa8.37□□□□□ -1.07
PTPRO-208ENST00000542557 PLEKHG1Q9ULL1 1385 aa8.37□□□□□ -1.07
PTPRO-208ENST00000542557 NEFMP07197 916 aa8.36□□□□□ -1.07
PTPRO-208ENST00000542557 BRPF1P55201 1214 aaPredicted RBP8.36□□□□□ -1.07
PTPRO-208ENST00000542557 ALDH1L2Q3SY69 923 aa8.36□□□□□ -1.07
PTPRO-208ENST00000542557 NUDT16Q96DE0 195 aaKnown RBP8.36□□□□□ -1.07
PTPRO-208ENST00000542557 CALD1Q05682 793 aaKnown RBP8.36□□□□□ -1.07
PTPRO-208ENST00000542557 ATF7IPQ6VMQ6 1270 aa8.36□□□□□ -1.07
PTPRO-208ENST00000542557 SSH1Q8WYL5 1049 aa8.36□□□□□ -1.07
PTPRO-208ENST00000542557 DDX19BQ9UMR2 479 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms