RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 BCCIPQ9P287 314 aaKnown RBP eCLIP18.22■□□□□ 0.51
HMGA2-210ENST00000541363 RBM10P98175 930 aaKnown RBP18.22■□□□□ 0.51
HMGA2-210ENST00000541363 CFAP45Q9UL16 551 aa18.22■□□□□ 0.51
HMGA2-210ENST00000541363 DDX23Q9BUQ8 820 aaKnown RBP18.21■□□□□ 0.51
HMGA2-210ENST00000541363 ANAPC15P60006 121 aa18.21■□□□□ 0.51
HMGA2-210ENST00000541363 RIC3Q7Z5B4 369 aa18.21■□□□□ 0.51
HMGA2-210ENST00000541363 MATR3P43243 847 aaKnown RBP eCLIP18.21■□□□□ 0.511e-6■■■□□ 16.6
HMGA2-210ENST00000541363 ZHX3Q9H4I2 956 aa18.21■□□□□ 0.51
HMGA2-210ENST00000541363 CFAP57Q96MR6 1250 aa18.2■□□□□ 0.5
HMGA2-210ENST00000541363 HIP1O00291 1037 aa18.2■□□□□ 0.5
HMGA2-210ENST00000541363 CCDC102AQ96A19 550 aa18.2■□□□□ 0.5
HMGA2-210ENST00000541363 PODXL2Q9NZ53 605 aa18.2■□□□□ 0.5
HMGA2-210ENST00000541363 UACAQ9BZF9 1416 aa18.19■□□□□ 0.5
HMGA2-210ENST00000541363 ATP2B1P20020 1258 aa18.19■□□□□ 0.5
HMGA2-210ENST00000541363 NUTM2DQ5VT03 806 aaPredicted RBP18.19■□□□□ 0.5
HMGA2-210ENST00000541363 EXOC6Q8TAG9 804 aa18.19■□□□□ 0.5
HMGA2-210ENST00000541363 SHTN1A0MZ66 631 aa18.19■□□□□ 0.5
HMGA2-210ENST00000541363 STK38Q15208 465 aa18.19■□□□□ 0.5
HMGA2-210ENST00000541363 FANCIQ9NVI1 1328 aa18.19■□□□□ 0.5
HMGA2-210ENST00000541363 POTEJP0CG39 1038 aa18.18■□□□□ 0.5
HMGA2-210ENST00000541363 CDC45O75419 566 aa18.18■□□□□ 0.5
HMGA2-210ENST00000541363 MCM2P49736 904 aa18.18■□□□□ 0.5
HMGA2-210ENST00000541363 CCDC192P0DO97 292 aa18.18■□□□□ 0.5
HMGA2-210ENST00000541363 TICAM2Q86XR7 235 aa18.18■□□□□ 0.5
HMGA2-210ENST00000541363 EVC2Q86UK5 1308 aa18.17■□□□□ 0.5
HMGA2-210ENST00000541363 ANKRD18BA2A2Z9 1011 aa18.17■□□□□ 0.5
HMGA2-210ENST00000541363 FAM177A1Q8N128 213 aaPredicted RBP18.17■□□□□ 0.5
HMGA2-210ENST00000541363 CETN2P41208 172 aa18.17■□□□□ 0.5
HMGA2-210ENST00000541363 DDX11Q96FC9 970 aa18.17■□□□□ 0.5
HMGA2-210ENST00000541363 SSR1P43307 286 aaKnown RBP18.17■□□□□ 0.5
HMGA2-210ENST00000541363 ERC1Q8IUD2 1116 aa18.17■□□□□ 0.5
HMGA2-210ENST00000541363 TAF4BQ92750 862 aa18.17■□□□□ 0.5
HMGA2-210ENST00000541363 TRAK2O60296 914 aa18.17■□□□□ 0.5
HMGA2-210ENST00000541363 KIAA1328Q86T90 577 aa18.17■□□□□ 0.5
HMGA2-210ENST00000541363 CCDC148Q8NFR7 591 aa18.17■□□□□ 0.5
HMGA2-210ENST00000541363 FSD1Q9BTV5 496 aa18.16■□□□□ 0.5
HMGA2-210ENST00000541363 TRAK1Q9UPV9 953 aa18.16■□□□□ 0.5
HMGA2-210ENST00000541363 ERICH4A6NGS2 130 aa18.15■□□□□ 0.5
HMGA2-210ENST00000541363 WASHC2CQ9Y4E1 1318 aa18.15■□□□□ 0.5
HMGA2-210ENST00000541363 CEBPZQ03701 1054 aaKnown RBP18.14■□□□□ 0.49
HMGA2-210ENST00000541363 ZNF397Q8NF99 534 aaPredicted RBP18.14■□□□□ 0.49
HMGA2-210ENST00000541363 TNMDQ9H2S6 317 aa18.14■□□□□ 0.49
HMGA2-210ENST00000541363 PANK3Q9H999 370 aa18.14■□□□□ 0.49
HMGA2-210ENST00000541363 TMCO3Q6UWJ1 677 aa18.14■□□□□ 0.49
HMGA2-210ENST00000541363 ATP2B2Q01814 1243 aa18.13■□□□□ 0.49
HMGA2-210ENST00000541363 MPHOSPH10O00566 681 aaKnown RBP18.13■□□□□ 0.49
HMGA2-210ENST00000541363 NFKBIBQ15653 356 aa18.13■□□□□ 0.49
HMGA2-210ENST00000541363 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
HMGA2-210ENST00000541363 RIPK4P57078 832 aa18.13■□□□□ 0.49
HMGA2-210ENST00000541363 CRACR2AQ9BSW2 395 aa18.13■□□□□ 0.49
HMGA2-210ENST00000541363 LNPKQ9C0E8 428 aa18.13■□□□□ 0.49
HMGA2-210ENST00000541363 CARMIL2Q6F5E8 1435 aa18.13■□□□□ 0.49
HMGA2-210ENST00000541363 EPB41L2O43491 1005 aaKnown RBP18.13■□□□□ 0.49
HMGA2-210ENST00000541363 UBTFL1P0CB47 393 aaPredicted RBP18.13■□□□□ 0.49
HMGA2-210ENST00000541363 UQCRHLA0A096LP55 91 aa18.12■□□□□ 0.49
HMGA2-210ENST00000541363 UQCRHP07919 91 aa18.12■□□□□ 0.49
HMGA2-210ENST00000541363 CCDC113Q9H0I3 377 aa18.12■□□□□ 0.49
HMGA2-210ENST00000541363 BMP2KQ9NSY1 1161 aaPredicted RBP18.12■□□□□ 0.49
HMGA2-210ENST00000541363 MAP9Q49MG5 647 aa18.12■□□□□ 0.49
HMGA2-210ENST00000541363 TRIM22Q8IYM9 498 aa18.12■□□□□ 0.49
HMGA2-210ENST00000541363 GBP3Q9H0R5 595 aa18.12■□□□□ 0.49
HMGA2-210ENST00000541363 PRPF40AO75400 957 aaKnown RBP18.12■□□□□ 0.49
HMGA2-210ENST00000541363 GCOM1H8Y6P7 765 aaPredicted RBP18.12■□□□□ 0.49
HMGA2-210ENST00000541363 MYZAPP0CAP1 466 aa18.12■□□□□ 0.49
HMGA2-210ENST00000541363 DIAPH1O60610 1272 aaKnown RBP18.11■□□□□ 0.49
HMGA2-210ENST00000541363 MCM3P25205 808 aa18.11■□□□□ 0.49
HMGA2-210ENST00000541363 MICALCLQ6ZW33 695 aa18.11■□□□□ 0.49
HMGA2-210ENST00000541363 AEBP1Q8IUX7 1158 aa18.11■□□□□ 0.49
HMGA2-210ENST00000541363 PSME1Q06323 249 aa18.11■□□□□ 0.49
HMGA2-210ENST00000541363 AAMPQ13685 434 aa18.11■□□□□ 0.49
HMGA2-210ENST00000541363 EFCAB2Q5VUJ9 269 aa18.11■□□□□ 0.49
HMGA2-210ENST00000541363 ZBED9Q6R2W3 1325 aa18.1■□□□□ 0.49
HMGA2-210ENST00000541363 KIF6Q6ZMV9 814 aa18.1■□□□□ 0.49
HMGA2-210ENST00000541363 ANKRD1Q15327 319 aa18.1■□□□□ 0.49
HMGA2-210ENST00000541363 NOL7Q9UMY1 257 aaKnown RBP18.1■□□□□ 0.49
HMGA2-210ENST00000541363 CCDC69A6NI79 296 aa18.1■□□□□ 0.49
HMGA2-210ENST00000541363 SOGA3Q5TF21 947 aa18.1■□□□□ 0.49
HMGA2-210ENST00000541363 FMN1Q68DA7 1419 aa18.1■□□□□ 0.49
HMGA2-210ENST00000541363 CCDC57Q2TAC2 916 aa18.1■□□□□ 0.49
HMGA2-210ENST00000541363 GNL3LQ9NVN8 582 aaKnown RBP18.09■□□□□ 0.49
HMGA2-210ENST00000541363 AIMP1Q12904 312 aaKnown RBP18.09■□□□□ 0.49
HMGA2-210ENST00000541363 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.09■□□□□ 0.49
HMGA2-210ENST00000541363 FIBPO43427 364 aa18.09■□□□□ 0.49
HMGA2-210ENST00000541363 TTC39AQ5SRH9 613 aa18.09■□□□□ 0.49
HMGA2-210ENST00000541363 ME1P48163 572 aa18.09■□□□□ 0.49
HMGA2-210ENST00000541363 DNAJC2Q99543 621 aaKnown RBP18.09■□□□□ 0.49
HMGA2-210ENST00000541363 RSPH4AQ5TD94 716 aa18.08■□□□□ 0.48
HMGA2-210ENST00000541363 MYO15BQ96JP2 1530 aa18.08■□□□□ 0.48
HMGA2-210ENST00000541363 RAB3GAP2Q9H2M9 1393 aa18.08■□□□□ 0.48
HMGA2-210ENST00000541363 FAM107BQ9H098 131 aa18.07■□□□□ 0.48
HMGA2-210ENST00000541363 GNAI1P63096 354 aa18.07■□□□□ 0.48
HMGA2-210ENST00000541363 SMC1AQ14683 1233 aaKnown RBP18.07■□□□□ 0.48
HMGA2-210ENST00000541363 GIGYF2Q6Y7W6 1299 aaKnown RBP18.07■□□□□ 0.48
HMGA2-210ENST00000541363 UBE4AQ14139 1066 aa18.07■□□□□ 0.48
HMGA2-210ENST00000541363 IMMTQ16891 758 aaKnown RBP18.07■□□□□ 0.48
HMGA2-210ENST00000541363 ZWINTO95229 277 aa18.06■□□□□ 0.48
HMGA2-210ENST00000541363 GOPCQ9HD26 462 aa18.06■□□□□ 0.48
HMGA2-210ENST00000541363 PPP1R12BO60237 982 aaPredicted RBP18.06■□□□□ 0.48
HMGA2-210ENST00000541363 SMTNL1A8MU46 457 aa18.06■□□□□ 0.48
HMGA2-210ENST00000541363 IFFO1Q0D2I5 559 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms