RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 NUDT16Q96DE0 195 aaKnown RBP11.01□□□□□ -0.65
C2CD3-215ENST00000540452 PNNQ9H307 717 aaKnown RBP11.01□□□□□ -0.65
C2CD3-215ENST00000540452 ADAMTS8Q9UP79 889 aa11.01□□□□□ -0.65
C2CD3-215ENST00000540452 AMOTL2Q9Y2J4 779 aa11.01□□□□□ -0.65
C2CD3-215ENST00000540452 ZNF521Q96K83 1311 aa11.01□□□□□ -0.65
C2CD3-215ENST00000540452 COL3A1P02461 1466 aaPredicted RBP11□□□□□ -0.65
C2CD3-215ENST00000540452 CABP1Q9NZU7 370 aa11□□□□□ -0.65
C2CD3-215ENST00000540452 NKTRP30414 1462 aaKnown RBP11□□□□□ -0.65
C2CD3-215ENST00000540452 IQSEC2Q5JU85 1478 aa11□□□□□ -0.65
C2CD3-215ENST00000540452 CDK12Q9NYV4 1490 aaPredicted RBP11□□□□□ -0.65
C2CD3-215ENST00000540452 HSPA2P54652 639 aa10.99□□□□□ -0.65
C2CD3-215ENST00000540452 CNGB1Q14028 1251 aaPredicted RBP10.99□□□□□ -0.65
C2CD3-215ENST00000540452 CCDC27Q2M243 656 aa10.99□□□□□ -0.65
C2CD3-215ENST00000540452 TTC21AQ8NDW8 1320 aa10.99□□□□□ -0.65
C2CD3-215ENST00000540452 NPHP4O75161 1426 aaPredicted RBP10.99□□□□□ -0.65
C2CD3-215ENST00000540452 USP6P35125 1406 aa10.98□□□□□ -0.65
C2CD3-215ENST00000540452 SSH2Q76I76 1423 aa10.98□□□□□ -0.65
C2CD3-215ENST00000540452 NCOA3Q9Y6Q9 1424 aa10.98□□□□□ -0.65
C2CD3-215ENST00000540452 MAP2P11137 1827 aaKnown RBP10.98□□□□□ -0.65
C2CD3-215ENST00000540452 MTHFSP49914 203 aa10.97□□□□□ -0.65
C2CD3-215ENST00000540452 RUNDC1Q96C34 613 aa10.97□□□□□ -0.65
C2CD3-215ENST00000540452 OVOS2A0A0J9YW53 1432 aa10.96□□□□□ -0.65
C2CD3-215ENST00000540452 OVOS2Q6IE36 1432 aa10.96□□□□□ -0.65
C2CD3-215ENST00000540452 ADGRL3Q9HAR2 1447 aa10.96□□□□□ -0.65
C2CD3-215ENST00000540452 KIF24Q5T7B8 1368 aa10.96□□□□□ -0.65
C2CD3-215ENST00000540452 FKBP8Q14318 412 aa10.96□□□□□ -0.65
C2CD3-215ENST00000540452 SLC26A8Q96RN1 970 aa10.96□□□□□ -0.65
C2CD3-215ENST00000540452 USP31Q70CQ4 1352 aa10.95□□□□□ -0.66
C2CD3-215ENST00000540452 PRR36Q9H6K5 1346 aa10.95□□□□□ -0.66
C2CD3-215ENST00000540452 GOLGA2Q08379 1002 aa10.95□□□□□ -0.66
C2CD3-215ENST00000540452 TRMT2AQ8IZ69 625 aaKnown RBP10.95□□□□□ -0.66
C2CD3-215ENST00000540452 E9PSI1 815 aa10.94□□□□□ -0.66
C2CD3-215ENST00000540452 DCCP43146 1447 aa10.93□□□□□ -0.66
C2CD3-215ENST00000540452 KCNA6P17658 529 aa10.93□□□□□ -0.66
C2CD3-215ENST00000540452 WDR63Q8IWG1 891 aa10.93□□□□□ -0.66
C2CD3-215ENST00000540452 COG3Q96JB2 828 aa10.93□□□□□ -0.66
C2CD3-215ENST00000540452 GGNBP2Q9H3C7 697 aa10.93□□□□□ -0.66
C2CD3-215ENST00000540452 KIF1AQ12756 1690 aa10.92□□□□□ -0.66
C2CD3-215ENST00000540452 TTC21BQ7Z4L5 1316 aa10.92□□□□□ -0.66
C2CD3-215ENST00000540452 PPP4R2Q9NY27 417 aa10.92□□□□□ -0.66
C2CD3-215ENST00000540452 RCAN3Q9UKA8 241 aa10.92□□□□□ -0.66
C2CD3-215ENST00000540452 RGPD8O14715 1765 aaPredicted RBP10.92□□□□□ -0.66
C2CD3-215ENST00000540452 ACEP12821 1306 aa10.91□□□□□ -0.66
C2CD3-215ENST00000540452 DIAPH1O60610 1272 aaKnown RBP10.91□□□□□ -0.66
C2CD3-215ENST00000540452 FCHSD2O94868 740 aa10.91□□□□□ -0.66
C2CD3-215ENST00000540452 CT47B1P0C2W7 299 aaPredicted RBP10.91□□□□□ -0.66
C2CD3-215ENST00000540452 SLFN5Q08AF3 891 aa10.91□□□□□ -0.66
C2CD3-215ENST00000540452 DUSP27Q5VZP5 1158 aa10.91□□□□□ -0.66
C2CD3-215ENST00000540452 PHRF1Q9P1Y6 1649 aaKnown RBP10.91□□□□□ -0.66
C2CD3-215ENST00000540452 IL16Q14005 1332 aa10.9□□□□□ -0.66
C2CD3-215ENST00000540452 APAF1O14727 1248 aa10.9□□□□□ -0.66
C2CD3-215ENST00000540452 POLKQ9UBT6 870 aa10.9□□□□□ -0.66
C2CD3-215ENST00000540452 PIK3C2AO00443 1686 aa10.89□□□□□ -0.67
C2CD3-215ENST00000540452 MST1RQ04912 1400 aa10.89□□□□□ -0.67
C2CD3-215ENST00000540452 RGPD1P0DJD0 1748 aa10.89□□□□□ -0.67
C2CD3-215ENST00000540452 NEFMP07197 916 aa10.88□□□□□ -0.67
C2CD3-215ENST00000540452 RRP1P56182 461 aaKnown RBP10.88□□□□□ -0.67
C2CD3-215ENST00000540452 WWC1Q8IX03 1113 aa10.88□□□□□ -0.67
C2CD3-215ENST00000540452 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.88□□□□□ -0.67
C2CD3-215ENST00000540452 PLEKHF1Q96S99 279 aa10.88□□□□□ -0.67
C2CD3-215ENST00000540452 MARF1Q9Y4F3 1742 aaKnown RBP10.87□□□□□ -0.67
C2CD3-215ENST00000540452 U2AF1L5P0DN76 240 aaPredicted RBP10.87□□□□□ -0.67
C2CD3-215ENST00000540452 TNNT2P45379 298 aaPredicted RBP10.87□□□□□ -0.67
C2CD3-215ENST00000540452 U2AF1Q01081 240 aaKnown RBP eCLIP10.87□□□□□ -0.67
C2CD3-215ENST00000540452 TCP11L2Q8N4U5 519 aa10.87□□□□□ -0.67
C2CD3-215ENST00000540452 RTL1A6NKG5 1358 aa10.87□□□□□ -0.67
C2CD3-215ENST00000540452 MAPK8IP3Q9UPT6 1336 aa10.86□□□□□ -0.67
C2CD3-215ENST00000540452 CALD1Q05682 793 aaKnown RBP10.86□□□□□ -0.67
C2CD3-215ENST00000540452 NME9Q86XW9 330 aa10.86□□□□□ -0.67
C2CD3-215ENST00000540452 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.86□□□□□ -0.67
C2CD3-215ENST00000540452 MYH16Q9H6N6 1097 aa10.86□□□□□ -0.67
C2CD3-215ENST00000540452 AAMPQ13685 434 aa10.85□□□□□ -0.67
C2CD3-215ENST00000540452 NGDNQ8NEJ9 315 aaKnown RBP10.85□□□□□ -0.67
C2CD3-215ENST00000540452 SBNO1A3KN83 1393 aa10.85□□□□□ -0.67
C2CD3-215ENST00000540452 FLT4P35916 1363 aa10.85□□□□□ -0.67
C2CD3-215ENST00000540452 IL13P35225 146 aa10.84□□□□□ -0.67
C2CD3-215ENST00000540452 LMOD3Q0VAK6 560 aa10.84□□□□□ -0.67
C2CD3-215ENST00000540452 POTEDQ86YR6 584 aa10.84□□□□□ -0.67
C2CD3-215ENST00000540452 CCDC146Q8IYE0 955 aa10.84□□□□□ -0.67
C2CD3-215ENST00000540452 ZNF428Q96B54 188 aa10.84□□□□□ -0.67
C2CD3-215ENST00000540452 CDCA7LQ96GN5 454 aa10.84□□□□□ -0.67
C2CD3-215ENST00000540452 ARHGEF10O15013 1369 aa10.83□□□□□ -0.68
C2CD3-215ENST00000540452 TMPOP42166 694 aaKnown RBP10.83□□□□□ -0.68
C2CD3-215ENST00000540452 PPP4R3CPQ6ZMV5 832 aa10.83□□□□□ -0.68
C2CD3-215ENST00000540452 RSPH6AQ9H0K4 717 aa10.83□□□□□ -0.68
C2CD3-215ENST00000540452 PEAK1Q9H792 1746 aa10.83□□□□□ -0.68
C2CD3-215ENST00000540452 TRPM3Q9HCF6 1732 aaPredicted RBP10.82□□□□□ -0.68
C2CD3-215ENST00000540452 UBAP1LF5GYI3 381 aa10.82□□□□□ -0.68
C2CD3-215ENST00000540452 C19orf44Q9H6X5 657 aa10.82□□□□□ -0.68
C2CD3-215ENST00000540452 PHF8Q9UPP1 1060 aa10.82□□□□□ -0.68
C2CD3-215ENST00000540452 SLIT3O75094 1523 aa10.82□□□□□ -0.68
C2CD3-215ENST00000540452 ABCC6O95255 1503 aa10.82□□□□□ -0.68
C2CD3-215ENST00000540452 NCKAP5LQ9HCH0 1330 aa10.82□□□□□ -0.68
C2CD3-215ENST00000540452 KDRP35968 1356 aa10.81□□□□□ -0.68
C2CD3-215ENST00000540452 PLEKHG2Q9H7P9 1386 aa10.81□□□□□ -0.68
C2CD3-215ENST00000540452 U2SURPO15042 1029 aaKnown RBP10.81□□□□□ -0.68
C2CD3-215ENST00000540452 DLG5Q8TDM6 1919 aa10.8□□□□□ -0.68
C2CD3-215ENST00000540452 NFE2L2Q16236 605 aa10.8□□□□□ -0.68
C2CD3-215ENST00000540452 KCNH5Q8NCM2 988 aa10.8□□□□□ -0.68
C2CD3-215ENST00000540452 SALL2Q9Y467 1007 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms