RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 NUTM2GQ5VZR2 741 aa13.87□□□□□ -0.19
PABPC1P4-201ENST00000539977 COG3Q96JB2 828 aa13.87□□□□□ -0.19
PABPC1P4-201ENST00000539977 POLR3AO14802 1390 aaPredicted RBP13.87□□□□□ -0.19
PABPC1P4-201ENST00000539977 SOX12O15370 315 aa13.87□□□□□ -0.19
PABPC1P4-201ENST00000539977 FOXO3O43524 673 aa13.87□□□□□ -0.19
PABPC1P4-201ENST00000539977 WDR43Q15061 677 aaKnown RBP eCLIP13.87□□□□□ -0.19
PABPC1P4-201ENST00000539977 SALL2Q9Y467 1007 aaPredicted RBP13.86□□□□□ -0.19
PABPC1P4-201ENST00000539977 TOPAZ1Q8N9V7 1692 aa13.86□□□□□ -0.19
PABPC1P4-201ENST00000539977 FMN2Q9NZ56 1722 aa13.85□□□□□ -0.19
PABPC1P4-201ENST00000539977 RGPD8O14715 1765 aaPredicted RBP13.85□□□□□ -0.19
PABPC1P4-201ENST00000539977 PSME1Q06323 249 aa13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 RRS1Q15050 365 aaKnown RBP13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 DMRT2Q9Y5R5 561 aa13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 SSH2Q76I76 1423 aa13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 PLEKHG5O94827 1062 aa13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 DDX17Q92841 729 aaKnown RBP13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 POLKQ9UBT6 870 aa13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 EMILIN1Q9Y6C2 1016 aa13.84□□□□□ -0.19
PABPC1P4-201ENST00000539977 C1orf167Q5SNV9 1468 aa13.83□□□□□ -0.2
PABPC1P4-201ENST00000539977 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 CFAP53Q96M91 514 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 MSH6P52701 1360 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 NLRP6P59044 892 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 ABTB2Q8N961 1025 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 LRRC7Q96NW7 1537 aa13.82□□□□□ -0.2
PABPC1P4-201ENST00000539977 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
PABPC1P4-201ENST00000539977 MON2Q7Z3U7 1717 aa13.81□□□□□ -0.2
PABPC1P4-201ENST00000539977 TTC21AQ8NDW8 1320 aa13.81□□□□□ -0.2
PABPC1P4-201ENST00000539977 LMOD2Q6P5Q4 547 aa13.8□□□□□ -0.2
PABPC1P4-201ENST00000539977 MST1RQ04912 1400 aa13.8□□□□□ -0.2
PABPC1P4-201ENST00000539977 AKAP12Q02952 1782 aa13.8□□□□□ -0.2
PABPC1P4-201ENST00000539977 NCOA3Q9Y6Q9 1424 aa13.79□□□□□ -0.2
PABPC1P4-201ENST00000539977 U2SURPO15042 1029 aaKnown RBP13.79□□□□□ -0.2
PABPC1P4-201ENST00000539977 ZBED9Q6R2W3 1325 aa13.79□□□□□ -0.2
PABPC1P4-201ENST00000539977 KRT28Q7Z3Y7 464 aa13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 OVOS2A0A0J9YW53 1432 aa13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 OVOS2Q6IE36 1432 aa13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 NRKQ7Z2Y5 1582 aa13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 KIF20BQ96Q89 1820 aa13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 U2AF1L5P0DN76 240 aaPredicted RBP13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 U2AF1Q01081 240 aaKnown RBP eCLIP13.78□□□□□ -0.2
PABPC1P4-201ENST00000539977 SCAF1Q9H7N4 1312 aaKnown RBP13.77□□□□□ -0.2
PABPC1P4-201ENST00000539977 SLAIN2Q9P270 581 aa13.76□□□□□ -0.21
PABPC1P4-201ENST00000539977 DCCP43146 1447 aa13.76□□□□□ -0.21
PABPC1P4-201ENST00000539977 DIAPH1O60610 1272 aaKnown RBP13.76□□□□□ -0.21
PABPC1P4-201ENST00000539977 BLMP54132 1417 aaPredicted RBP13.76□□□□□ -0.21
PABPC1P4-201ENST00000539977 AATKQ6ZMQ8 1374 aa13.75□□□□□ -0.21
PABPC1P4-201ENST00000539977 APAF1O14727 1248 aa13.75□□□□□ -0.21
PABPC1P4-201ENST00000539977 BRINP3Q76B58 766 aa13.75□□□□□ -0.21
PABPC1P4-201ENST00000539977 ANKRD26Q9UPS8 1709 aa13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 MAP3K19Q56UN5 1328 aa13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 USP31Q70CQ4 1352 aa13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 PNPLA6Q8IY17 1366 aa13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 HSP90AB2PQ58FF8 381 aa13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 NUDCQ9Y266 331 aa13.74□□□□□ -0.21
PABPC1P4-201ENST00000539977 COL3A1P02461 1466 aaPredicted RBP13.73□□□□□ -0.21
PABPC1P4-201ENST00000539977 ZBTB7CA1YPR0 619 aa13.73□□□□□ -0.21
PABPC1P4-201ENST00000539977 PIK3C2AO00443 1686 aa13.73□□□□□ -0.21
PABPC1P4-201ENST00000539977 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
PABPC1P4-201ENST00000539977 RRP7AQ9Y3A4 280 aaKnown RBP13.72□□□□□ -0.21
PABPC1P4-201ENST00000539977 HMOX1P09601 288 aa13.72□□□□□ -0.21
PABPC1P4-201ENST00000539977 XIRP1Q702N8 1843 aaKnown RBP13.72□□□□□ -0.21
PABPC1P4-201ENST00000539977 IL13P35225 146 aa13.71□□□□□ -0.21
PABPC1P4-201ENST00000539977 AMPHP49418 695 aa13.71□□□□□ -0.21
PABPC1P4-201ENST00000539977 EIF4A2Q14240 407 aaKnown RBP13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 CDCA7LQ96GN5 454 aa13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 NPHP3Q7Z494 1330 aa13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 INSRP06213 1382 aa13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 SHPRHQ149N8 1683 aa13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 SMG6Q86US8 1419 aaKnown RBP13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 TCP11L2Q8N4U5 519 aa13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 RUNDC1Q96C34 613 aa13.7□□□□□ -0.22
PABPC1P4-201ENST00000539977 CABLES1Q8TDN4 633 aa13.69□□□□□ -0.22
PABPC1P4-201ENST00000539977 GTF3C3Q9Y5Q9 886 aa13.69□□□□□ -0.22
PABPC1P4-201ENST00000539977 GCP02774 474 aa13.68□□□□□ -0.22
PABPC1P4-201ENST00000539977 CDK12Q9NYV4 1490 aaPredicted RBP13.68□□□□□ -0.22
PABPC1P4-201ENST00000539977 LTV1Q96GA3 475 aaPredicted RBP13.67□□□□□ -0.22
PABPC1P4-201ENST00000539977 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
PABPC1P4-201ENST00000539977 PLEKHF1Q96S99 279 aa13.67□□□□□ -0.22
PABPC1P4-201ENST00000539977 MAP2P11137 1827 aaKnown RBP13.67□□□□□ -0.22
PABPC1P4-201ENST00000539977 HOXC9P31274 260 aa13.66□□□□□ -0.22
PABPC1P4-201ENST00000539977 ZC3H6P61129 1189 aaKnown RBP13.66□□□□□ -0.22
PABPC1P4-201ENST00000539977 AEBP1Q8IUX7 1158 aa13.66□□□□□ -0.22
PABPC1P4-201ENST00000539977 SBNO1A3KN83 1393 aa13.66□□□□□ -0.22
PABPC1P4-201ENST00000539977 FLT4P35916 1363 aa13.66□□□□□ -0.22
PABPC1P4-201ENST00000539977 KIF1AQ12756 1690 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 KCNH5Q8NCM2 988 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 RSPH6AQ9H0K4 717 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 SPATA31A3Q5VYP0 1347 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 LTBP4Q8N2S1 1624 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 FCHSD2O94868 740 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 PHACTR3Q96KR7 559 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 PEAK1Q9H792 1746 aa13.65□□□□□ -0.22
PABPC1P4-201ENST00000539977 MAPK8IP3Q9UPT6 1336 aa13.64□□□□□ -0.23
PABPC1P4-201ENST00000539977 PXDNQ92626 1479 aa13.64□□□□□ -0.23
PABPC1P4-201ENST00000539977 SULT6B1Q6IMI4 303 aa13.64□□□□□ -0.23
PABPC1P4-201ENST00000539977 USP19O94966 1318 aa13.64□□□□□ -0.23
PABPC1P4-201ENST00000539977 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms