RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 NKTRP30414 1462 aaKnown RBP29.68■■■□□ 2.34
HOMER3-204ENST00000539827 ZNF521Q96K83 1311 aa29.67■■■□□ 2.34
HOMER3-204ENST00000539827 COL3A1P02461 1466 aaPredicted RBP29.65■■■□□ 2.34
HOMER3-204ENST00000539827 U2AF1L5P0DN76 240 aaPredicted RBP29.64■■■□□ 2.34
HOMER3-204ENST00000539827 U2AF1Q01081 240 aaKnown RBP eCLIP29.64■■■□□ 2.34
HOMER3-204ENST00000539827 PMFBP1Q8TBY8 1022 aa29.64■■■□□ 2.34
HOMER3-204ENST00000539827 RUNDC1Q96C34 613 aa29.64■■■□□ 2.34
HOMER3-204ENST00000539827 RNF123Q5XPI4 1314 aa29.63■■■□□ 2.33
HOMER3-204ENST00000539827 COG3Q96JB2 828 aa29.63■■■□□ 2.33
HOMER3-204ENST00000539827 RGPD8O14715 1765 aaPredicted RBP29.62■■■□□ 2.33
HOMER3-204ENST00000539827 TTC21BQ7Z4L5 1316 aa29.62■■■□□ 2.33
HOMER3-204ENST00000539827 KDM4FA0A1W2PPD8 638 aa29.62■■■□□ 2.33
HOMER3-204ENST00000539827 POLKQ9UBT6 870 aa29.62■■■□□ 2.33
HOMER3-204ENST00000539827 GOLGA2Q08379 1002 aa29.61■■■□□ 2.33
HOMER3-204ENST00000539827 RBM33Q96EV2 1170 aaKnown RBP29.61■■■□□ 2.33
HOMER3-204ENST00000539827 U2SURPO15042 1029 aaKnown RBP29.61■■■□□ 2.33
HOMER3-204ENST00000539827 RCAN3Q9UKA8 241 aa29.61■■■□□ 2.33
HOMER3-204ENST00000539827 PPM1GO15355 546 aaPredicted RBP29.6■■■□□ 2.33
HOMER3-204ENST00000539827 USP6P35125 1406 aa29.59■■■□□ 2.33
HOMER3-204ENST00000539827 NRKQ7Z2Y5 1582 aa29.58■■■□□ 2.33
HOMER3-204ENST00000539827 MAP2P11137 1827 aaKnown RBP29.58■■■□□ 2.33
HOMER3-204ENST00000539827 PNPLA6Q8IY17 1366 aa29.58■■■□□ 2.33
HOMER3-204ENST00000539827 DIAPH1O60610 1272 aaKnown RBP29.57■■■□□ 2.32
HOMER3-204ENST00000539827 ERICH6BQ5W0A0 696 aa29.57■■■□□ 2.32
HOMER3-204ENST00000539827 TCP11L2Q8N4U5 519 aa29.57■■■□□ 2.32
HOMER3-204ENST00000539827 RRP7AQ9Y3A4 280 aaKnown RBP29.57■■■□□ 2.32
HOMER3-204ENST00000539827 NGEFQ8N5V2 710 aa29.56■■■□□ 2.32
HOMER3-204ENST00000539827 NGDNQ8NEJ9 315 aaKnown RBP29.56■■■□□ 2.32
HOMER3-204ENST00000539827 EMILIN1Q9Y6C2 1016 aa29.56■■■□□ 2.32
HOMER3-204ENST00000539827 FMN2Q9NZ56 1722 aa29.56■■■□□ 2.32
HOMER3-204ENST00000539827 NEUROD2Q15784 382 aa29.55■■■□□ 2.32
HOMER3-204ENST00000539827 SLFN5Q08AF3 891 aa29.55■■■□□ 2.32
HOMER3-204ENST00000539827 DUSP27Q5VZP5 1158 aa29.55■■■□□ 2.32
HOMER3-204ENST00000539827 NALCNQ8IZF0 1738 aa29.55■■■□□ 2.32
HOMER3-204ENST00000539827 IQSEC2Q5JU85 1478 aa29.54■■■□□ 2.32
HOMER3-204ENST00000539827 ANKARQ7Z5J8 1434 aa29.54■■■□□ 2.32
HOMER3-204ENST00000539827 AATKQ6ZMQ8 1374 aa29.52■■■□□ 2.32
HOMER3-204ENST00000539827 SPINK5Q9NQ38 1064 aaPredicted RBP29.52■■■□□ 2.32
HOMER3-204ENST00000539827 DMRT2Q9Y5R5 561 aa29.52■■■□□ 2.32
HOMER3-204ENST00000539827 SSH2Q76I76 1423 aa29.51■■■□□ 2.31
HOMER3-204ENST00000539827 RRS1Q15050 365 aaKnown RBP29.51■■■□□ 2.31
HOMER3-204ENST00000539827 RRP1P56182 461 aaKnown RBP29.5■■■□□ 2.31
HOMER3-204ENST00000539827 WWC1Q8IX03 1113 aa29.5■■■□□ 2.31
HOMER3-204ENST00000539827 PPP4R2Q9NY27 417 aa29.48■■■□□ 2.31
HOMER3-204ENST00000539827 TRMT2AQ8IZ69 625 aaKnown RBP29.48■■■□□ 2.31
HOMER3-204ENST00000539827 PLEKHF1Q96S99 279 aa29.47■■■□□ 2.31
HOMER3-204ENST00000539827 OVOS2A0A0J9YW53 1432 aa29.47■■■□□ 2.31
HOMER3-204ENST00000539827 OVOS2Q6IE36 1432 aa29.47■■■□□ 2.31
HOMER3-204ENST00000539827 TTC21AQ8NDW8 1320 aa29.46■■■□□ 2.31
HOMER3-204ENST00000539827 ADGRL3Q9HAR2 1447 aa29.45■■■□□ 2.31
HOMER3-204ENST00000539827 E9PSI1 815 aa29.45■■■□□ 2.31
HOMER3-204ENST00000539827 C14orf37Q86TY3 774 aa29.44■■■□□ 2.3
HOMER3-204ENST00000539827 CDK12Q9NYV4 1490 aaPredicted RBP29.44■■■□□ 2.3
HOMER3-204ENST00000539827 NWD1Q149M9 1564 aa29.43■■■□□ 2.3
HOMER3-204ENST00000539827 PHF23Q9BUL5 403 aaPredicted RBP29.42■■■□□ 2.3
HOMER3-204ENST00000539827 MAPK8IP3Q9UPT6 1336 aa29.41■■■□□ 2.3
HOMER3-204ENST00000539827 IL13P35225 146 aa29.41■■■□□ 2.3
HOMER3-204ENST00000539827 HSPA2P54652 639 aa29.4■■■□□ 2.3
HOMER3-204ENST00000539827 CCDC27Q2M243 656 aa29.4■■■□□ 2.3
HOMER3-204ENST00000539827 PROSER2Q86WR7 435 aaPredicted RBP29.4■■■□□ 2.3
HOMER3-204ENST00000539827 PHF8Q9UPP1 1060 aa29.4■■■□□ 2.3
HOMER3-204ENST00000539827 SOX12O15370 315 aa29.39■■■□□ 2.3
HOMER3-204ENST00000539827 USP31Q70CQ4 1352 aa29.39■■■□□ 2.29
HOMER3-204ENST00000539827 TMPOP42166 694 aaKnown RBP29.38■■■□□ 2.29
HOMER3-204ENST00000539827 PNNQ9H307 717 aaKnown RBP29.38■■■□□ 2.29
HOMER3-204ENST00000539827 FCHSD2O94868 740 aa29.37■■■□□ 2.29
HOMER3-204ENST00000539827 WDR63Q8IWG1 891 aa29.37■■■□□ 2.29
HOMER3-204ENST00000539827 PLIN1O60240 522 aa29.37■■■□□ 2.29
HOMER3-204ENST00000539827 HMOX1P09601 288 aa29.37■■■□□ 2.29
HOMER3-204ENST00000539827 NCBP3Q53F19 620 aaKnown RBP29.37■■■□□ 2.29
HOMER3-204ENST00000539827 RSPH6AQ9H0K4 717 aa29.37■■■□□ 2.29
HOMER3-204ENST00000539827 PIK3C2AO00443 1686 aa29.36■■■□□ 2.29
HOMER3-204ENST00000539827 PRKAR2BP31323 418 aa29.35■■■□□ 2.29
HOMER3-204ENST00000539827 B4GALNT3Q6L9W6 998 aa29.35■■■□□ 2.29
HOMER3-204ENST00000539827 LRRC7Q96NW7 1537 aa29.35■■■□□ 2.29
HOMER3-204ENST00000539827 ESCO1Q5FWF5 840 aa29.34■■■□□ 2.29
HOMER3-204ENST00000539827 PAK3O75914 559 aaPredicted RBP29.33■■■□□ 2.29
HOMER3-204ENST00000539827 NUTM2GQ5VZR2 741 aa29.33■■■□□ 2.29
HOMER3-204ENST00000539827 NLRP6P59044 892 aa29.32■■■□□ 2.28
HOMER3-204ENST00000539827 TRIM35Q9UPQ4 493 aa29.31■■■□□ 2.28
HOMER3-204ENST00000539827 PEAK1Q9H792 1746 aa29.31■■■□□ 2.28
HOMER3-204ENST00000539827 RIPK4P57078 832 aa29.3■■■□□ 2.28
HOMER3-204ENST00000539827 EXOC6Q8TAG9 804 aa29.3■■■□□ 2.28
HOMER3-204ENST00000539827 EIF4A2Q14240 407 aaKnown RBP29.29■■■□□ 2.28
HOMER3-204ENST00000539827 ABTB2Q8N961 1025 aa29.28■■■□□ 2.28
HOMER3-204ENST00000539827 MAP3K19Q56UN5 1328 aa29.28■■■□□ 2.28
HOMER3-204ENST00000539827 NEFMP07197 916 aa29.28■■■□□ 2.28
HOMER3-204ENST00000539827 HSP90AB2PQ58FF8 381 aa29.27■■■□□ 2.28
HOMER3-204ENST00000539827 PHACTR3Q96KR7 559 aa29.27■■■□□ 2.28
HOMER3-204ENST00000539827 ORAI2Q96SN7 254 aa29.27■■■□□ 2.28
HOMER3-204ENST00000539827 PSME1Q06323 249 aa29.25■■■□□ 2.27
HOMER3-204ENST00000539827 STRCP1A6NGW2 1772 aa29.25■■■□□ 2.27
HOMER3-204ENST00000539827 MARF1Q9Y4F3 1742 aaKnown RBP29.24■■■□□ 2.27
HOMER3-204ENST00000539827 MYH16Q9H6N6 1097 aa29.22■■■□□ 2.27
HOMER3-204ENST00000539827 C19orf44Q9H6X5 657 aa29.22■■■□□ 2.27
HOMER3-204ENST00000539827 BCAR3O75815 825 aa29.21■■■□□ 2.27
HOMER3-204ENST00000539827 NFE2L2Q16236 605 aa29.21■■■□□ 2.27
HOMER3-204ENST00000539827 C20orf194Q5TEA3 1177 aa29.21■■■□□ 2.27
HOMER3-204ENST00000539827 SBNO1A3KN83 1393 aa29.21■■■□□ 2.27
HOMER3-204ENST00000539827 AMPHP49418 695 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms