RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 MAPK8IP3Q9UPT6 1336 aa18.02■□□□□ 0.48
UBE3B-210ENST00000539599 TRIM27P14373 513 aa18.02■□□□□ 0.48
UBE3B-210ENST00000539599 FAM69CQ0P6D2 419 aa18.02■□□□□ 0.47
UBE3B-210ENST00000539599 CCDC27Q2M243 656 aa18.02■□□□□ 0.47
UBE3B-210ENST00000539599 ITPRIPQ8IWB1 547 aa18.01■□□□□ 0.47
UBE3B-210ENST00000539599 SLKQ9H2G2 1235 aaPredicted RBP18.01■□□□□ 0.47
UBE3B-210ENST00000539599 MVPQ14764 893 aaKnown RBP18.01■□□□□ 0.47
UBE3B-210ENST00000539599 NOB1Q9ULX3 412 aaKnown RBP18■□□□□ 0.47
UBE3B-210ENST00000539599 TMEM131LA2VDJ0 1609 aa18■□□□□ 0.47
UBE3B-210ENST00000539599 ZKSCAN2Q63HK3 967 aa18■□□□□ 0.47
UBE3B-210ENST00000539599 DZIP1LQ8IYY4 767 aaKnown RBP18■□□□□ 0.47
UBE3B-210ENST00000539599 SPRYD3Q8NCJ5 442 aa18■□□□□ 0.47
UBE3B-210ENST00000539599 PREX1Q8TCU6 1659 aa17.99■□□□□ 0.47
UBE3B-210ENST00000539599 TERF2IPQ9NYB0 399 aa17.99■□□□□ 0.47
UBE3B-210ENST00000539599 COL3A1P02461 1466 aaPredicted RBP17.99■□□□□ 0.47
UBE3B-210ENST00000539599 DIAPH1O60610 1272 aaKnown RBP17.98■□□□□ 0.47
UBE3B-210ENST00000539599 NLRP1Q9C000 1473 aa17.98■□□□□ 0.47
UBE3B-210ENST00000539599 NSD2O96028 1365 aa17.98■□□□□ 0.47
UBE3B-210ENST00000539599 ELL2O00472 640 aaPredicted RBP17.98■□□□□ 0.47
UBE3B-210ENST00000539599 ARHGAP31Q2M1Z3 1444 aa17.98■□□□□ 0.47
UBE3B-210ENST00000539599 TSPOAP1O95153 1857 aa17.97■□□□□ 0.47
UBE3B-210ENST00000539599 PMFBP1Q8TBY8 1022 aa17.97■□□□□ 0.47
UBE3B-210ENST00000539599 PHACTR3Q96KR7 559 aa17.97■□□□□ 0.47
UBE3B-210ENST00000539599 EMILIN1Q9Y6C2 1016 aa17.97■□□□□ 0.47
UBE3B-210ENST00000539599 NINLQ9Y2I6 1382 aa17.97■□□□□ 0.47
UBE3B-210ENST00000539599 PRKAR2BP31323 418 aa17.97■□□□□ 0.47
UBE3B-210ENST00000539599 ADGRB2O60241 1585 aa17.97■□□□□ 0.47
UBE3B-210ENST00000539599 TMEM57Q8N5G2 664 aa17.96■□□□□ 0.47
UBE3B-210ENST00000539599 HDGFL2Q7Z4V5 671 aaPredicted RBP17.96■□□□□ 0.47
UBE3B-210ENST00000539599 USP35Q9P2H5 1018 aa17.95■□□□□ 0.46
UBE3B-210ENST00000539599 ALKQ9UM73 1620 aa17.95■□□□□ 0.46
UBE3B-210ENST00000539599 NME9Q86XW9 330 aa17.95■□□□□ 0.46
UBE3B-210ENST00000539599 POLKQ9UBT6 870 aa17.95■□□□□ 0.46
UBE3B-210ENST00000539599 ATAD2Q6PL18 1390 aa17.95■□□□□ 0.46
UBE3B-210ENST00000539599 PUS7Q96PZ0 661 aaKnown RBP17.94■□□□□ 0.46
UBE3B-210ENST00000539599 TXNDC2Q86VQ3 553 aa17.94■□□□□ 0.46
UBE3B-210ENST00000539599 RWDD1Q9H446 243 aaPredicted RBP17.94■□□□□ 0.46
UBE3B-210ENST00000539599 NUTM2FA1L443 756 aa17.93■□□□□ 0.46
UBE3B-210ENST00000539599 C1orf115Q9H7X2 142 aa17.93■□□□□ 0.46
UBE3B-210ENST00000539599 RRS1Q15050 365 aaKnown RBP17.93■□□□□ 0.46
UBE3B-210ENST00000539599 BRPF3Q9ULD4 1205 aa17.93■□□□□ 0.46
UBE3B-210ENST00000539599 ATF7IPQ6VMQ6 1270 aa17.92■□□□□ 0.46
UBE3B-210ENST00000539599 ZFYVE9O95405 1425 aa17.92■□□□□ 0.46
UBE3B-210ENST00000539599 TSPYL6Q8N831 410 aa17.92■□□□□ 0.46
UBE3B-210ENST00000539599 ARHGEF40Q8TER5 1519 aa17.91■□□□□ 0.46
UBE3B-210ENST00000539599 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
UBE3B-210ENST00000539599 GSE1Q14687 1217 aa17.91■□□□□ 0.46
UBE3B-210ENST00000539599 MFAP1P55081 439 aaKnown RBP17.9■□□□□ 0.46
UBE3B-210ENST00000539599 LRRC7Q96NW7 1537 aa17.9■□□□□ 0.46
UBE3B-210ENST00000539599 FAM83GA6ND36 823 aa17.9■□□□□ 0.46
UBE3B-210ENST00000539599 DCTN1Q14203 1278 aa17.9■□□□□ 0.46
UBE3B-210ENST00000539599 RSPH6AQ9H0K4 717 aa17.9■□□□□ 0.46
UBE3B-210ENST00000539599 METP08581 1390 aa17.87■□□□□ 0.45
UBE3B-210ENST00000539599 SOX12O15370 315 aa17.87■□□□□ 0.45
UBE3B-210ENST00000539599 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
UBE3B-210ENST00000539599 LNPKQ9C0E8 428 aa17.87■□□□□ 0.45
UBE3B-210ENST00000539599 TBC1D32Q96NH3 1257 aa17.86■□□□□ 0.45
UBE3B-210ENST00000539599 TBC1D2Q9BYX2 928 aa17.86■□□□□ 0.45
UBE3B-210ENST00000539599 CLTCQ00610 1675 aaKnown RBP17.86■□□□□ 0.45
UBE3B-210ENST00000539599 PNPLA6Q8IY17 1366 aa17.86■□□□□ 0.45
UBE3B-210ENST00000539599 RIMS2Q9UQ26 1411 aa17.85■□□□□ 0.45
UBE3B-210ENST00000539599 A2ML1A8K2U0 1454 aa17.85■□□□□ 0.45
UBE3B-210ENST00000539599 DDX19BQ9UMR2 479 aa17.85■□□□□ 0.45
UBE3B-210ENST00000539599 ARXQ96QS3 562 aa17.84■□□□□ 0.45
UBE3B-210ENST00000539599 ZBTB40Q9NUA8 1239 aa17.84■□□□□ 0.45
UBE3B-210ENST00000539599 PPIP5K1Q6PFW1 1433 aa17.83■□□□□ 0.44
UBE3B-210ENST00000539599 ANKRD26Q9UPS8 1709 aa17.83■□□□□ 0.44
UBE3B-210ENST00000539599 MAP2P11137 1827 aaKnown RBP17.83■□□□□ 0.44
UBE3B-210ENST00000539599 FCHSD2O94868 740 aa17.83■□□□□ 0.44
UBE3B-210ENST00000539599 KIF20BQ96Q89 1820 aa17.82■□□□□ 0.44
UBE3B-210ENST00000539599 KRT24Q2M2I5 525 aa17.82■□□□□ 0.44
UBE3B-210ENST00000539599 AEBP1Q8IUX7 1158 aa17.82■□□□□ 0.44
UBE3B-210ENST00000539599 UPF2Q9HAU5 1272 aaKnown RBP17.82■□□□□ 0.44
UBE3B-210ENST00000539599 WASLO00401 505 aaPredicted RBP17.81■□□□□ 0.44
UBE3B-210ENST00000539599 MBIPQ9NS73 344 aa17.81■□□□□ 0.44
UBE3B-210ENST00000539599 FAM135BQ49AJ0 1406 aa17.81■□□□□ 0.44
UBE3B-210ENST00000539599 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
UBE3B-210ENST00000539599 IL13P35225 146 aa17.8■□□□□ 0.44
UBE3B-210ENST00000539599 NFE2L2Q16236 605 aa17.8■□□□□ 0.44
UBE3B-210ENST00000539599 C8orf58Q8NAV2 365 aa17.8■□□□□ 0.44
UBE3B-210ENST00000539599 CPS1P31327 1500 aa17.8■□□□□ 0.44
UBE3B-210ENST00000539599 VAMP4O75379 141 aa17.79■□□□□ 0.44
UBE3B-210ENST00000539599 HDAC1Q13547 482 aaPredicted RBP17.79■□□□□ 0.44
UBE3B-210ENST00000539599 BECN1Q14457 450 aa17.79■□□□□ 0.44
UBE3B-210ENST00000539599 MED14O60244 1454 aa17.79■□□□□ 0.44
UBE3B-210ENST00000539599 IL16Q14005 1332 aa17.79■□□□□ 0.44
UBE3B-210ENST00000539599 CT47B1P0C2W7 299 aaPredicted RBP17.79■□□□□ 0.44
UBE3B-210ENST00000539599 C22orf23Q9BZE7 217 aa17.79■□□□□ 0.44
UBE3B-210ENST00000539599 PRR36Q9H6K5 1346 aa17.78■□□□□ 0.44
UBE3B-210ENST00000539599 ANTXR1Q9H6X2 564 aa17.78■□□□□ 0.44
UBE3B-210ENST00000539599 SMC5Q8IY18 1101 aa17.78■□□□□ 0.44
UBE3B-210ENST00000539599 KIF16BQ96L93 1317 aa17.77■□□□□ 0.44
UBE3B-210ENST00000539599 AAMPQ13685 434 aa17.77■□□□□ 0.44
UBE3B-210ENST00000539599 RIMBP3CA6NJZ7 1639 aa17.77■□□□□ 0.44
UBE3B-210ENST00000539599 RIMBP3BA6NNM3 1639 aa17.77■□□□□ 0.44
UBE3B-210ENST00000539599 RIMBP3Q9UFD9 1639 aa17.77■□□□□ 0.44
UBE3B-210ENST00000539599 MRPL50Q8N5N7 158 aaKnown RBP17.77■□□□□ 0.43
UBE3B-210ENST00000539599 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
UBE3B-210ENST00000539599 ANKRD45Q5TZF3 282 aa17.76■□□□□ 0.43
UBE3B-210ENST00000539599 DIP2BQ9P265 1576 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms