RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 FTSJ3Q8IY81 847 aaKnown RBP15.3■□□□□ 0.04
CPNE8-203ENST00000538596 SMC4Q9NTJ3 1288 aa15.3■□□□□ 0.04
CPNE8-203ENST00000538596 ZKSCAN2Q63HK3 967 aa15.3■□□□□ 0.04
CPNE8-203ENST00000538596 DZIP1LQ8IYY4 767 aaKnown RBP15.3■□□□□ 0.04
CPNE8-203ENST00000538596 SSH1Q8WYL5 1049 aa15.3■□□□□ 0.04
CPNE8-203ENST00000538596 CD163L1Q9NR16 1453 aa15.3■□□□□ 0.04
CPNE8-203ENST00000538596 CABP1Q9NZU7 370 aa15.29■□□□□ 0.04
CPNE8-203ENST00000538596 COL3A1P02461 1466 aaPredicted RBP15.29■□□□□ 0.04
CPNE8-203ENST00000538596 KIF13AQ9H1H9 1805 aa15.29■□□□□ 0.04
CPNE8-203ENST00000538596 YTHDC2Q9H6S0 1430 aaKnown RBP15.28■□□□□ 0.04
CPNE8-203ENST00000538596 TRIM27P14373 513 aa15.28■□□□□ 0.04
CPNE8-203ENST00000538596 GSE1Q14687 1217 aa15.28■□□□□ 0.04
CPNE8-203ENST00000538596 CDK19Q9BWU1 502 aa15.28■□□□□ 0.04
CPNE8-203ENST00000538596 RWDD1Q9H446 243 aaPredicted RBP15.28■□□□□ 0.04
CPNE8-203ENST00000538596 TERF2IPQ9NYB0 399 aa15.28■□□□□ 0.04
CPNE8-203ENST00000538596 TMEM131LA2VDJ0 1609 aa15.28■□□□□ 0.04
CPNE8-203ENST00000538596 RIPK4P57078 832 aa15.28■□□□□ 0.04
CPNE8-203ENST00000538596 ZFYVE9O95405 1425 aa15.28■□□□□ 0.04
CPNE8-203ENST00000538596 NLRP1Q9C000 1473 aa15.28■□□□□ 0.04
CPNE8-203ENST00000538596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.27■□□□□ 0.04
CPNE8-203ENST00000538596 RTN4Q9NQC3 1192 aaKnown RBP15.27■□□□□ 0.03
CPNE8-203ENST00000538596 PREX1Q8TCU6 1659 aa15.27■□□□□ 0.03
CPNE8-203ENST00000538596 ATAD2Q6PL18 1390 aa15.26■□□□□ 0.03
CPNE8-203ENST00000538596 ITPRIPQ8IWB1 547 aa15.26■□□□□ 0.03
CPNE8-203ENST00000538596 NOB1Q9ULX3 412 aaKnown RBP15.26■□□□□ 0.03
CPNE8-203ENST00000538596 WAPLQ7Z5K2 1190 aa15.26■□□□□ 0.03
CPNE8-203ENST00000538596 SLKQ9H2G2 1235 aaPredicted RBP15.26■□□□□ 0.03
CPNE8-203ENST00000538596 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
CPNE8-203ENST00000538596 DIAPH1O60610 1272 aaKnown RBP15.25■□□□□ 0.03
CPNE8-203ENST00000538596 AAMPQ13685 434 aa15.25■□□□□ 0.03
CPNE8-203ENST00000538596 MLECQ14165 292 aa15.25■□□□□ 0.03
CPNE8-203ENST00000538596 NCBP3Q53F19 620 aaKnown RBP15.24■□□□□ 0.03
CPNE8-203ENST00000538596 HDGFL2Q7Z4V5 671 aaPredicted RBP15.24■□□□□ 0.03
CPNE8-203ENST00000538596 ATF7IPQ6VMQ6 1270 aa15.23■□□□□ 0.03
CPNE8-203ENST00000538596 TMEM57Q8N5G2 664 aa15.23■□□□□ 0.03
CPNE8-203ENST00000538596 ALKQ9UM73 1620 aa15.22■□□□□ 0.03
CPNE8-203ENST00000538596 BRPF3Q9ULD4 1205 aa15.22■□□□□ 0.03
CPNE8-203ENST00000538596 TBC1D32Q96NH3 1257 aa15.22■□□□□ 0.03
CPNE8-203ENST00000538596 HMOX1P09601 288 aa15.21■□□□□ 0.03
CPNE8-203ENST00000538596 CT47B1P0C2W7 299 aaPredicted RBP15.21■□□□□ 0.03
CPNE8-203ENST00000538596 THUMPD2Q9BTF0 503 aaKnown RBP15.21■□□□□ 0.03
CPNE8-203ENST00000538596 ARHGEF40Q8TER5 1519 aa15.21■□□□□ 0.03
CPNE8-203ENST00000538596 PRKAR2BP31323 418 aa15.21■□□□□ 0.02
CPNE8-203ENST00000538596 ANKRD26Q9UPS8 1709 aa15.2■□□□□ 0.02
CPNE8-203ENST00000538596 PHACTR3Q96KR7 559 aa15.2■□□□□ 0.02
CPNE8-203ENST00000538596 UPF2Q9HAU5 1272 aaKnown RBP15.2■□□□□ 0.02
CPNE8-203ENST00000538596 POLKQ9UBT6 870 aa15.2■□□□□ 0.02
CPNE8-203ENST00000538596 PNPLA6Q8IY17 1366 aa15.19■□□□□ 0.02
CPNE8-203ENST00000538596 CLTCQ00610 1675 aaKnown RBP15.19■□□□□ 0.02
CPNE8-203ENST00000538596 BECN1Q14457 450 aa15.19■□□□□ 0.02
CPNE8-203ENST00000538596 SPRYD3Q8NCJ5 442 aa15.19■□□□□ 0.02
CPNE8-203ENST00000538596 DDX19BQ9UMR2 479 aa15.19■□□□□ 0.02
CPNE8-203ENST00000538596 TBC1D2Q9BYX2 928 aa15.18■□□□□ 0.02
CPNE8-203ENST00000538596 ZRANB1Q9UGI0 708 aa15.18■□□□□ 0.02
CPNE8-203ENST00000538596 MED14O60244 1454 aa15.18■□□□□ 0.02
CPNE8-203ENST00000538596 RSPH6AQ9H0K4 717 aa15.18■□□□□ 0.02
CPNE8-203ENST00000538596 IL16Q14005 1332 aa15.18■□□□□ 0.02
CPNE8-203ENST00000538596 LRRC7Q96NW7 1537 aa15.18■□□□□ 0.02
CPNE8-203ENST00000538596 EMILIN1Q9Y6C2 1016 aa15.18■□□□□ 0.02
CPNE8-203ENST00000538596 MFAP1P55081 439 aaKnown RBP15.17■□□□□ 0.02
CPNE8-203ENST00000538596 HDAC1Q13547 482 aaPredicted RBP15.17■□□□□ 0.02
CPNE8-203ENST00000538596 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
CPNE8-203ENST00000538596 ZBTB40Q9NUA8 1239 aa15.17■□□□□ 0.02
CPNE8-203ENST00000538596 FCHSD2O94868 740 aa15.16■□□□□ 0.02
CPNE8-203ENST00000538596 KIF20BQ96Q89 1820 aa15.16■□□□□ 0.02
CPNE8-203ENST00000538596 ELL2O00472 640 aaPredicted RBP15.16■□□□□ 0.02
CPNE8-203ENST00000538596 ANTXR1Q9H6X2 564 aa15.16■□□□□ 0.02
CPNE8-203ENST00000538596 NME9Q86XW9 330 aa15.15■□□□□ 0.02
CPNE8-203ENST00000538596 TSPYL6Q8N831 410 aa15.15■□□□□ 0.02
CPNE8-203ENST00000538596 ZMYM3Q14202 1370 aa15.14■□□□□ 0.01
CPNE8-203ENST00000538596 SMC5Q8IY18 1101 aa15.14■□□□□ 0.01
CPNE8-203ENST00000538596 KIF16BQ96L93 1317 aa15.14■□□□□ 0.01
CPNE8-203ENST00000538596 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
CPNE8-203ENST00000538596 LNPKQ9C0E8 428 aa15.14■□□□□ 0.01
CPNE8-203ENST00000538596 PNNQ9H307 717 aaKnown RBP15.14■□□□□ 0.01
CPNE8-203ENST00000538596 MAP2P11137 1827 aaKnown RBP15.14■□□□□ 0.01
CPNE8-203ENST00000538596 FAM135BQ49AJ0 1406 aa15.13■□□□□ 0.01
CPNE8-203ENST00000538596 C22orf23Q9BZE7 217 aa15.13■□□□□ 0.01
CPNE8-203ENST00000538596 C1orf115Q9H7X2 142 aa15.13■□□□□ 0.01
CPNE8-203ENST00000538596 IPO8O15397 1037 aaKnown RBP15.13■□□□□ 0.01
CPNE8-203ENST00000538596 A2ML1A8K2U0 1454 aa15.12■□□□□ 0.01
CPNE8-203ENST00000538596 TXNDC2Q86VQ3 553 aa15.12■□□□□ 0.01
CPNE8-203ENST00000538596 RRS1Q15050 365 aaKnown RBP15.12■□□□□ 0.01
CPNE8-203ENST00000538596 RIMS2Q9UQ26 1411 aa15.11■□□□□ 0.01
CPNE8-203ENST00000538596 NFE2L2Q16236 605 aa15.11■□□□□ 0.01
CPNE8-203ENST00000538596 ALDH1L2Q3SY69 923 aa15.11■□□□□ 0.01
CPNE8-203ENST00000538596 VAMP4O75379 141 aa15.1■□□□□ 0.01
CPNE8-203ENST00000538596 FAM83GA6ND36 823 aa15.1■□□□□ 0.01
CPNE8-203ENST00000538596 IL13P35225 146 aa15.1■□□□□ 0.01
CPNE8-203ENST00000538596 METP08581 1390 aa15.1■□□□□ 0.01
CPNE8-203ENST00000538596 PPIP5K1Q6PFW1 1433 aa15.09■□□□□ 0.01
CPNE8-203ENST00000538596 WASLO00401 505 aaPredicted RBP15.09■□□□□ 0.01
CPNE8-203ENST00000538596 NUCB1Q02818 461 aa15.09■□□□□ 0.01
CPNE8-203ENST00000538596 MBIPQ9NS73 344 aa15.09■□□□□ 0.01
CPNE8-203ENST00000538596 CDC42BPGQ6DT37 1551 aa15.09■□□□□ 0.01
CPNE8-203ENST00000538596 DCTN1Q14203 1278 aa15.09■□□□□ 0.01
CPNE8-203ENST00000538596 ATP7BP35670 1465 aa15.08■□□□□ 0.01
CPNE8-203ENST00000538596 MRPL50Q8N5N7 158 aaKnown RBP15.08■□□□□ 0.01
CPNE8-203ENST00000538596 ZBTB7BO15156 539 aaPredicted RBP15.08■□□□□ 0
CPNE8-203ENST00000538596 PLPPR3Q6T4P5 718 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms