RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 TMPOP42166 694 aaKnown RBP32.11■■■□□ 2.73
RAB40C-204ENST00000538492 MAPK8IP3Q9UPT6 1336 aa32.11■■■□□ 2.73
RAB40C-204ENST00000538492 RLBP1P12271 317 aa32.11■■■□□ 2.73
RAB40C-204ENST00000538492 NCBP3Q53F19 620 aaKnown RBP32.11■■■□□ 2.73
RAB40C-204ENST00000538492 KIF20BQ96Q89 1820 aa32.1■■■□□ 2.73
RAB40C-204ENST00000538492 FAM161AQ3B820 660 aa32.1■■■□□ 2.73
RAB40C-204ENST00000538492 FBLN1P23142 703 aa32.1■■■□□ 2.73
RAB40C-204ENST00000538492 C8orf34Q49A92 452 aa32.09■■■□□ 2.73
RAB40C-204ENST00000538492 DLC1Q96QB1 1528 aa32.09■■■□□ 2.73
RAB40C-204ENST00000538492 DIAPH1O60610 1272 aaKnown RBP32.09■■■□□ 2.73
RAB40C-204ENST00000538492 ESF1Q9H501 851 aaKnown RBP32.09■■■□□ 2.73
RAB40C-204ENST00000538492 PPM1GO15355 546 aaPredicted RBP32.07■■■□□ 2.72
RAB40C-204ENST00000538492 TRIM35Q9UPQ4 493 aa32.07■■■□□ 2.72
RAB40C-204ENST00000538492 METP08581 1390 aa32.04■■■□□ 2.72
RAB40C-204ENST00000538492 ZMYM3Q14202 1370 aa32.04■■■□□ 2.72
RAB40C-204ENST00000538492 NRXN3Q9Y4C0 1643 aa32.03■■■□□ 2.72
RAB40C-204ENST00000538492 TXNDC2Q86VQ3 553 aa32.03■■■□□ 2.72
RAB40C-204ENST00000538492 PNPLA6Q8IY17 1366 aa32.02■■■□□ 2.72
RAB40C-204ENST00000538492 KIF13AQ9H1H9 1805 aa32.02■■■□□ 2.72
RAB40C-204ENST00000538492 RIPK4P57078 832 aa32.02■■■□□ 2.72
RAB40C-204ENST00000538492 EXOSC9Q06265 439 aaKnown RBP32.01■■■□□ 2.72
RAB40C-204ENST00000538492 ATP7BP35670 1465 aa32.01■■■□□ 2.71
RAB40C-204ENST00000538492 WASLO00401 505 aaPredicted RBP31.99■■■□□ 2.71
RAB40C-204ENST00000538492 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.99■■■□□ 2.71
RAB40C-204ENST00000538492 POLKQ9UBT6 870 aa31.99■■■□□ 2.71
RAB40C-204ENST00000538492 PCDHB15Q9Y5E8 787 aa31.99■■■□□ 2.71
RAB40C-204ENST00000538492 DDRGK1Q96HY6 314 aa31.96■■■□□ 2.71
RAB40C-204ENST00000538492 PPIP5K1Q6PFW1 1433 aa31.96■■■□□ 2.71
RAB40C-204ENST00000538492 LAS1LQ9Y4W2 734 aaKnown RBP31.96■■■□□ 2.71
RAB40C-204ENST00000538492 SMC4Q9NTJ3 1288 aa31.95■■■□□ 2.71
RAB40C-204ENST00000538492 NCKAP5LQ9HCH0 1330 aa31.95■■■□□ 2.71
RAB40C-204ENST00000538492 ZKSCAN2Q63HK3 967 aa31.95■■■□□ 2.7
RAB40C-204ENST00000538492 MAP2P11137 1827 aaKnown RBP31.94■■■□□ 2.7
RAB40C-204ENST00000538492 PNNQ9H307 717 aaKnown RBP31.93■■■□□ 2.7
RAB40C-204ENST00000538492 CT47B1P0C2W7 299 aaPredicted RBP31.93■■■□□ 2.7
RAB40C-204ENST00000538492 NME9Q86XW9 330 aa31.93■■■□□ 2.7
RAB40C-204ENST00000538492 FTSJ3Q8IY81 847 aaKnown RBP31.93■■■□□ 2.7
RAB40C-204ENST00000538492 PMFBP1Q8TBY8 1022 aa31.93■■■□□ 2.7
RAB40C-204ENST00000538492 LRRC7Q96NW7 1537 aa31.92■■■□□ 2.7
RAB40C-204ENST00000538492 FCHSD2O94868 740 aa31.92■■■□□ 2.7
RAB40C-204ENST00000538492 PRKAR2BP31323 418 aa31.92■■■□□ 2.7
RAB40C-204ENST00000538492 ZRANB1Q9UGI0 708 aa31.92■■■□□ 2.7
RAB40C-204ENST00000538492 AAMPQ13685 434 aa31.91■■■□□ 2.7
RAB40C-204ENST00000538492 MVPQ14764 893 aaKnown RBP31.91■■■□□ 2.7
RAB40C-204ENST00000538492 SSH1Q8WYL5 1049 aa31.91■■■□□ 2.7
RAB40C-204ENST00000538492 EMILIN1Q9Y6C2 1016 aa31.91■■■□□ 2.7
RAB40C-204ENST00000538492 CPSF1Q10570 1443 aaKnown RBP31.9■■■□□ 2.7
RAB40C-204ENST00000538492 DZIP1LQ8IYY4 767 aaKnown RBP31.9■■■□□ 2.7
RAB40C-204ENST00000538492 NUDT16Q96DE0 195 aaKnown RBP31.9■■■□□ 2.7
RAB40C-204ENST00000538492 IL16Q14005 1332 aa31.89■■■□□ 2.7
RAB40C-204ENST00000538492 RSPH6AQ9H0K4 717 aa31.89■■■□□ 2.7
RAB40C-204ENST00000538492 HMOX1P09601 288 aa31.89■■■□□ 2.7
RAB40C-204ENST00000538492 TNRQ92752 1358 aa31.89■■■□□ 2.7
RAB40C-204ENST00000538492 EDC4Q6P2E9 1401 aaKnown RBP31.88■■■□□ 2.69
RAB40C-204ENST00000538492 SLC4A3P48751 1232 aa31.88■■■□□ 2.69
RAB40C-204ENST00000538492 RTL5Q5HYW3 569 aaPredicted RBP31.87■■■□□ 2.69
RAB40C-204ENST00000538492 HDGFP51858 240 aaKnown RBP31.87■■■□□ 2.69
RAB40C-204ENST00000538492 CDC42BPGQ6DT37 1551 aa31.87■■■□□ 2.69
RAB40C-204ENST00000538492 TRIM27P14373 513 aa31.86■■■□□ 2.69
RAB40C-204ENST00000538492 NEFMP07197 916 aa31.85■■■□□ 2.69
RAB40C-204ENST00000538492 DEKP35659 375 aaKnown RBP31.84■■■□□ 2.69
RAB40C-204ENST00000538492 PHACTR3Q96KR7 559 aa31.84■■■□□ 2.69
RAB40C-204ENST00000538492 FAM135BQ49AJ0 1406 aa31.84■■■□□ 2.69
RAB40C-204ENST00000538492 CCDC61Q9Y6R9 512 aa31.84■■■□□ 2.69
RAB40C-204ENST00000538492 RWDD1Q9H446 243 aaPredicted RBP31.82■■■□□ 2.68
RAB40C-204ENST00000538492 NOB1Q9ULX3 412 aaKnown RBP31.82■■■□□ 2.68
RAB40C-204ENST00000538492 VIRMAQ69YN4 1812 aaKnown RBP31.81■■■□□ 2.68
RAB40C-204ENST00000538492 TMEM2Q9UHN6 1383 aa31.81■■■□□ 2.68
RAB40C-204ENST00000538492 KNDC1Q76NI1 1749 aa31.81■■■□□ 2.68
RAB40C-204ENST00000538492 PDZRN3Q9UPQ7 1066 aa31.8■■■□□ 2.68
RAB40C-204ENST00000538492 CPS1P31327 1500 aa31.8■■■□□ 2.68
RAB40C-204ENST00000538492 RRS1Q15050 365 aaKnown RBP31.8■■■□□ 2.68
RAB40C-204ENST00000538492 ATF7IPQ6VMQ6 1270 aa31.8■■■□□ 2.68
RAB40C-204ENST00000538492 TECPR2O15040 1411 aa31.8■■■□□ 2.68
RAB40C-204ENST00000538492 ITPRIPQ8IWB1 547 aa31.79■■■□□ 2.68
RAB40C-204ENST00000538492 COG3Q96JB2 828 aa31.79■■■□□ 2.68
RAB40C-204ENST00000538492 UBR1Q8IWV7 1749 aa31.79■■■□□ 2.68
RAB40C-204ENST00000538492 DAXXQ9UER7 740 aaPredicted RBP31.79■■■□□ 2.68
RAB40C-204ENST00000538492 IL13P35225 146 aa31.78■■■□□ 2.68
RAB40C-204ENST00000538492 THUMPD2Q9BTF0 503 aaKnown RBP31.78■■■□□ 2.68
RAB40C-204ENST00000538492 PRR36Q9H6K5 1346 aa31.78■■■□□ 2.68
RAB40C-204ENST00000538492 SIRT1Q96EB6 747 aa31.77■■■□□ 2.68
RAB40C-204ENST00000538492 ROBO2Q9HCK4 1378 aa31.77■■■□□ 2.68
RAB40C-204ENST00000538492 NFE2L2Q16236 605 aa31.76■■■□□ 2.68
RAB40C-204ENST00000538492 SEC24BO95487 1268 aa31.76■■■□□ 2.67
RAB40C-204ENST00000538492 MON2Q7Z3U7 1717 aa31.76■■■□□ 2.67
RAB40C-204ENST00000538492 CDK12Q9NYV4 1490 aaPredicted RBP31.74■■■□□ 2.67
RAB40C-204ENST00000538492 DDX19BQ9UMR2 479 aa31.73■■■□□ 2.67
RAB40C-204ENST00000538492 NUTM2FA1L443 756 aa31.73■■■□□ 2.67
RAB40C-204ENST00000538492 AATKQ6ZMQ8 1374 aa31.73■■■□□ 2.67
RAB40C-204ENST00000538492 TMEM57Q8N5G2 664 aa31.72■■■□□ 2.67
RAB40C-204ENST00000538492 ITSN1Q15811 1721 aa31.72■■■□□ 2.67
RAB40C-204ENST00000538492 ADAMTS13Q76LX8 1427 aa31.72■■■□□ 2.67
RAB40C-204ENST00000538492 LTKP29376 864 aa31.71■■■□□ 2.67
RAB40C-204ENST00000538492 CEBPAP49715 358 aaPredicted RBP31.71■■■□□ 2.67
RAB40C-204ENST00000538492 USP19O94966 1318 aa31.71■■■□□ 2.67
RAB40C-204ENST00000538492 AKAP12Q02952 1782 aa31.71■■■□□ 2.67
RAB40C-204ENST00000538492 KIF16BQ96L93 1317 aa31.7■■■□□ 2.67
RAB40C-204ENST00000538492 C3P01024 1663 aa31.69■■■□□ 2.66
RAB40C-204ENST00000538492 ZNF692Q9BU19 519 aaPredicted RBP31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms