RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 PANK3Q9H999 370 aa17.56■□□□□ 0.4
CDK2AP1-204ENST00000538446 COL16A1Q07092 1604 aaPredicted RBP17.56■□□□□ 0.4
CDK2AP1-204ENST00000538446 MYOM1P52179 1685 aa17.55■□□□□ 0.4
CDK2AP1-204ENST00000538446 TTC21BQ7Z4L5 1316 aa17.55■□□□□ 0.4
CDK2AP1-204ENST00000538446 SSH2Q76I76 1423 aa17.55■□□□□ 0.4
CDK2AP1-204ENST00000538446 ARHGEF10O15013 1369 aa17.54■□□□□ 0.4
CDK2AP1-204ENST00000538446 TTC21AQ8NDW8 1320 aa17.54■□□□□ 0.4
CDK2AP1-204ENST00000538446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.54■□□□□ 0.4
CDK2AP1-204ENST00000538446 JCADQ9P266 1359 aa17.53■□□□□ 0.4
CDK2AP1-204ENST00000538446 ILDR1Q86SU0 546 aaPredicted RBP17.53■□□□□ 0.4
CDK2AP1-204ENST00000538446 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
CDK2AP1-204ENST00000538446 CARD14Q9BXL6 1004 aa17.52■□□□□ 0.4
CDK2AP1-204ENST00000538446 NSD3Q9BZ95 1437 aa17.52■□□□□ 0.4
CDK2AP1-204ENST00000538446 PNPLA6Q8IY17 1366 aa17.52■□□□□ 0.39
CDK2AP1-204ENST00000538446 NUTM2GQ5VZR2 741 aa17.5■□□□□ 0.39
CDK2AP1-204ENST00000538446 KNSTRNQ9Y448 316 aa17.5■□□□□ 0.39
CDK2AP1-204ENST00000538446 AKAP12Q02952 1782 aa17.5■□□□□ 0.39
CDK2AP1-204ENST00000538446 TRPM3Q9HCF6 1732 aaPredicted RBP17.5■□□□□ 0.39
CDK2AP1-204ENST00000538446 CGNL1Q0VF96 1302 aa17.49■□□□□ 0.39
CDK2AP1-204ENST00000538446 NLRP13Q86W25 1043 aa17.49■□□□□ 0.39
CDK2AP1-204ENST00000538446 NME9Q86XW9 330 aa17.49■□□□□ 0.39
CDK2AP1-204ENST00000538446 MON2Q7Z3U7 1717 aa17.49■□□□□ 0.39
CDK2AP1-204ENST00000538446 NRKQ7Z2Y5 1582 aa17.49■□□□□ 0.39
CDK2AP1-204ENST00000538446 NLRP6P59044 892 aa17.48■□□□□ 0.39
CDK2AP1-204ENST00000538446 SPATA31A6Q5VVP1 1343 aa17.47■□□□□ 0.39
CDK2AP1-204ENST00000538446 PLEKHG5O94827 1062 aa17.47■□□□□ 0.39
CDK2AP1-204ENST00000538446 HAP1P54257 671 aaPredicted RBP17.47■□□□□ 0.39
CDK2AP1-204ENST00000538446 DDX10Q13206 875 aaKnown RBP17.47■□□□□ 0.39
CDK2AP1-204ENST00000538446 FYB1O15117 783 aa17.45■□□□□ 0.38
CDK2AP1-204ENST00000538446 COG3Q96JB2 828 aa17.45■□□□□ 0.38
CDK2AP1-204ENST00000538446 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
CDK2AP1-204ENST00000538446 ALS2Q96Q42 1657 aa17.45■□□□□ 0.38
CDK2AP1-204ENST00000538446 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
CDK2AP1-204ENST00000538446 PER1O15534 1290 aaPredicted RBP17.44■□□□□ 0.38
CDK2AP1-204ENST00000538446 CABLES1Q8TDN4 633 aa17.44■□□□□ 0.38
CDK2AP1-204ENST00000538446 GGNBP2Q9H3C7 697 aa17.44■□□□□ 0.38
CDK2AP1-204ENST00000538446 USP19O94966 1318 aa17.44■□□□□ 0.38
CDK2AP1-204ENST00000538446 SHPRHQ149N8 1683 aa17.43■□□□□ 0.38
CDK2AP1-204ENST00000538446 NUTM2BA6NNL0 878 aaPredicted RBP17.43■□□□□ 0.38
CDK2AP1-204ENST00000538446 NUTM2EB1AL46 878 aaPredicted RBP17.43■□□□□ 0.38
CDK2AP1-204ENST00000538446 NUTM2AQ8IVF1 878 aaPredicted RBP17.43■□□□□ 0.38
CDK2AP1-204ENST00000538446 ZRANB1Q9UGI0 708 aa17.43■□□□□ 0.38
CDK2AP1-204ENST00000538446 MED1Q15648 1581 aaPredicted RBP17.43■□□□□ 0.38
CDK2AP1-204ENST00000538446 NSD2O96028 1365 aa17.42■□□□□ 0.38
CDK2AP1-204ENST00000538446 COL22A1Q8NFW1 1626 aaPredicted RBP17.42■□□□□ 0.38
CDK2AP1-204ENST00000538446 PIK3C2AO00443 1686 aa17.42■□□□□ 0.38
CDK2AP1-204ENST00000538446 OVOS2A0A0J9YW53 1432 aa17.41■□□□□ 0.38
CDK2AP1-204ENST00000538446 OVOS2Q6IE36 1432 aa17.41■□□□□ 0.38
CDK2AP1-204ENST00000538446 KCNH5Q8NCM2 988 aa17.41■□□□□ 0.38
CDK2AP1-204ENST00000538446 GCP02774 474 aa17.4■□□□□ 0.38
CDK2AP1-204ENST00000538446 AMER1Q5JTC6 1135 aaPredicted RBP17.4■□□□□ 0.38
CDK2AP1-204ENST00000538446 NPC1L1Q9UHC9 1359 aa17.39■□□□□ 0.37
CDK2AP1-204ENST00000538446 SOX12O15370 315 aa17.38■□□□□ 0.37
CDK2AP1-204ENST00000538446 ADAMTS2O95450 1211 aa17.38■□□□□ 0.37
CDK2AP1-204ENST00000538446 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
CDK2AP1-204ENST00000538446 SLIT3O75094 1523 aa17.37■□□□□ 0.37
CDK2AP1-204ENST00000538446 MEX3CQ5U5Q3 659 aaKnown RBP17.37■□□□□ 0.37
CDK2AP1-204ENST00000538446 MORC1Q86VD1 984 aa17.37■□□□□ 0.37
CDK2AP1-204ENST00000538446 LRP6O75581 1613 aa17.36■□□□□ 0.37
CDK2AP1-204ENST00000538446 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
CDK2AP1-204ENST00000538446 CNGB1Q14028 1251 aaPredicted RBP17.35■□□□□ 0.37
CDK2AP1-204ENST00000538446 PRDM11Q9NQV5 511 aa17.35■□□□□ 0.37
CDK2AP1-204ENST00000538446 CPDO75976 1380 aa17.34■□□□□ 0.37
CDK2AP1-204ENST00000538446 USP54Q70EL1 1684 aa17.34■□□□□ 0.37
CDK2AP1-204ENST00000538446 KIF20BQ96Q89 1820 aa17.33■□□□□ 0.37
CDK2AP1-204ENST00000538446 KIAA0232Q92628 1395 aa17.33■□□□□ 0.36
CDK2AP1-204ENST00000538446 ZBTB7CA1YPR0 619 aa17.33■□□□□ 0.36
CDK2AP1-204ENST00000538446 PHRF1Q9P1Y6 1649 aaKnown RBP17.32■□□□□ 0.36
CDK2AP1-204ENST00000538446 TNNT2P45379 298 aaPredicted RBP17.32■□□□□ 0.36
CDK2AP1-204ENST00000538446 C8orf37Q96NL8 207 aa17.32■□□□□ 0.36
CDK2AP1-204ENST00000538446 CRYBG1Q9Y4K1 1723 aa17.32■□□□□ 0.36
CDK2AP1-204ENST00000538446 NFAT5O94916 1531 aa17.31■□□□□ 0.36
CDK2AP1-204ENST00000538446 ABCA3Q99758 1704 aa17.31■□□□□ 0.36
CDK2AP1-204ENST00000538446 ARHGEF25Q86VW2 580 aa17.31■□□□□ 0.36
CDK2AP1-204ENST00000538446 NGLY1Q96IV0 654 aa17.31■□□□□ 0.36
CDK2AP1-204ENST00000538446 AATKQ6ZMQ8 1374 aa17.3■□□□□ 0.36
CDK2AP1-204ENST00000538446 FAM83GA6ND36 823 aa17.3■□□□□ 0.36
CDK2AP1-204ENST00000538446 CHRNA2Q15822 529 aa17.3■□□□□ 0.36
CDK2AP1-204ENST00000538446 MARF1Q9Y4F3 1742 aaKnown RBP17.3■□□□□ 0.36
CDK2AP1-204ENST00000538446 MAP3K19Q56UN5 1328 aa17.29■□□□□ 0.36
CDK2AP1-204ENST00000538446 FBLN1P23142 703 aa17.29■□□□□ 0.36
CDK2AP1-204ENST00000538446 RRS1Q15050 365 aaKnown RBP17.29■□□□□ 0.36
CDK2AP1-204ENST00000538446 AMPHP49418 695 aa17.28■□□□□ 0.36
CDK2AP1-204ENST00000538446 ANKRD26Q9UPS8 1709 aa17.27■□□□□ 0.35
CDK2AP1-204ENST00000538446 RTL1A6NKG5 1358 aa17.27■□□□□ 0.35
CDK2AP1-204ENST00000538446 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
CDK2AP1-204ENST00000538446 RALBP1Q15311 655 aa17.26■□□□□ 0.35
CDK2AP1-204ENST00000538446 BTG4Q9NY30 223 aa17.26■□□□□ 0.35
CDK2AP1-204ENST00000538446 POLKQ9UBT6 870 aa17.26■□□□□ 0.35
CDK2AP1-204ENST00000538446 EMILIN1Q9Y6C2 1016 aa17.26■□□□□ 0.35
CDK2AP1-204ENST00000538446 KIF24Q5T7B8 1368 aa17.26■□□□□ 0.35
CDK2AP1-204ENST00000538446 PARD3Q8TEW0 1356 aa17.26■□□□□ 0.35
CDK2AP1-204ENST00000538446 AFF2P51816 1311 aa17.25■□□□□ 0.35
CDK2AP1-204ENST00000538446 FNBP4Q8N3X1 1017 aaPredicted RBP17.25■□□□□ 0.35
CDK2AP1-204ENST00000538446 HOXC9P31274 260 aa17.24■□□□□ 0.35
CDK2AP1-204ENST00000538446 IP6K1Q92551 441 aa17.24■□□□□ 0.35
CDK2AP1-204ENST00000538446 SLIT2O94813 1529 aa17.24■□□□□ 0.35
CDK2AP1-204ENST00000538446 FLT4P35916 1363 aa17.24■□□□□ 0.35
CDK2AP1-204ENST00000538446 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
CDK2AP1-204ENST00000538446 ABCC6O95255 1503 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms