RNA–Protein interactions for RNA: ENST00000538307.1

SH2B3-202, Transcript of SH2B adaptor protein 3, humanhuman

TSL 2 BASIC

Gene SH2B3, Length 2,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-202ENST00000538307 PRAM1Q96QH2 718 aa21.62■■□□□ 1.05
SH2B3-202ENST00000538307 BCL2L13Q9BXK5 485 aa21.62■■□□□ 1.05
SH2B3-202ENST00000538307 MED14O60244 1454 aa21.62■■□□□ 1.05
SH2B3-202ENST00000538307 MINK1Q8N4C8 1332 aaPredicted RBP21.62■■□□□ 1.05
SH2B3-202ENST00000538307 PLEKHF1Q96S99 279 aa21.62■■□□□ 1.05
SH2B3-202ENST00000538307 TERF2IPQ9NYB0 399 aa21.62■■□□□ 1.05
SH2B3-202ENST00000538307 CD163L1Q9NR16 1453 aa21.61■■□□□ 1.05
SH2B3-202ENST00000538307 DAXXQ9UER7 740 aaPredicted RBP21.61■■□□□ 1.05
SH2B3-202ENST00000538307 STAG3Q9UJ98 1225 aa21.61■■□□□ 1.05
SH2B3-202ENST00000538307 FYB1O15117 783 aa21.6■■□□□ 1.05
SH2B3-202ENST00000538307 PCDHB15Q9Y5E8 787 aa21.6■■□□□ 1.05
SH2B3-202ENST00000538307 SPATA31D1Q6ZQQ2 1576 aa21.6■■□□□ 1.05
SH2B3-202ENST00000538307 VIRMAQ69YN4 1812 aaKnown RBP21.6■■□□□ 1.05
SH2B3-202ENST00000538307 NLRP1Q9C000 1473 aa21.6■■□□□ 1.05
SH2B3-202ENST00000538307 POGKQ9P215 609 aa21.59■■□□□ 1.05
SH2B3-202ENST00000538307 ANKRD26Q9UPS8 1709 aa21.59■■□□□ 1.05
SH2B3-202ENST00000538307 CT47B1P0C2W7 299 aaPredicted RBP21.59■■□□□ 1.05
SH2B3-202ENST00000538307 U2SURPO15042 1029 aaKnown RBP21.58■■□□□ 1.05
SH2B3-202ENST00000538307 TNRQ92752 1358 aa21.58■■□□□ 1.04
SH2B3-202ENST00000538307 ALKQ9UM73 1620 aa21.57■■□□□ 1.04
SH2B3-202ENST00000538307 TMPOP42166 694 aaKnown RBP21.57■■□□□ 1.04
SH2B3-202ENST00000538307 USP19O94966 1318 aa21.56■■□□□ 1.04
SH2B3-202ENST00000538307 TRIM35Q9UPQ4 493 aa21.56■■□□□ 1.04
SH2B3-202ENST00000538307 C3P01024 1663 aa21.55■■□□□ 1.04
SH2B3-202ENST00000538307 ZKSCAN2Q63HK3 967 aa21.55■■□□□ 1.04
SH2B3-202ENST00000538307 TSR2Q969E8 191 aaKnown RBP21.55■■□□□ 1.04
SH2B3-202ENST00000538307 RIMS1Q86UR5 1692 aaKnown RBP21.54■■□□□ 1.04
SH2B3-202ENST00000538307 MVPQ14764 893 aaKnown RBP21.54■■□□□ 1.04
SH2B3-202ENST00000538307 CDK19Q9BWU1 502 aa21.54■■□□□ 1.04
SH2B3-202ENST00000538307 HDGFL2Q7Z4V5 671 aaPredicted RBP21.54■■□□□ 1.04
SH2B3-202ENST00000538307 ADAMTSL3P82987 1691 aa21.53■■□□□ 1.04
SH2B3-202ENST00000538307 PNPLA6Q8IY17 1366 aa21.53■■□□□ 1.04
SH2B3-202ENST00000538307 EXOSC9Q06265 439 aaKnown RBP21.52■■□□□ 1.04
SH2B3-202ENST00000538307 NFKBIBQ15653 356 aa21.52■■□□□ 1.04
SH2B3-202ENST00000538307 RWDD1Q9H446 243 aaPredicted RBP21.52■■□□□ 1.04
SH2B3-202ENST00000538307 IL16Q14005 1332 aa21.52■■□□□ 1.03
SH2B3-202ENST00000538307 SEC24BO95487 1268 aa21.51■■□□□ 1.03
SH2B3-202ENST00000538307 DZIP1LQ8IYY4 767 aaKnown RBP21.51■■□□□ 1.03
SH2B3-202ENST00000538307 PDZRN3Q9UPQ7 1066 aa21.51■■□□□ 1.03
SH2B3-202ENST00000538307 DIAPH1O60610 1272 aaKnown RBP21.51■■□□□ 1.03
SH2B3-202ENST00000538307 CABP1Q9NZU7 370 aa21.51■■□□□ 1.03
SH2B3-202ENST00000538307 SMC4Q9NTJ3 1288 aa21.49■■□□□ 1.03
SH2B3-202ENST00000538307 FTSJ3Q8IY81 847 aaKnown RBP21.49■■□□□ 1.03
SH2B3-202ENST00000538307 RIPK4P57078 832 aa21.48■■□□□ 1.03
SH2B3-202ENST00000538307 PNNQ9H307 717 aaKnown RBP21.48■■□□□ 1.03
SH2B3-202ENST00000538307 KIF20BQ96Q89 1820 aa21.47■■□□□ 1.03
SH2B3-202ENST00000538307 SSH1Q8WYL5 1049 aa21.47■■□□□ 1.03
SH2B3-202ENST00000538307 DLC1Q96QB1 1528 aa21.47■■□□□ 1.03
SH2B3-202ENST00000538307 TRIM27P14373 513 aa21.46■■□□□ 1.03
SH2B3-202ENST00000538307 CDC42BPGQ6DT37 1551 aa21.45■■□□□ 1.02
SH2B3-202ENST00000538307 A2ML1A8K2U0 1454 aa21.45■■□□□ 1.02
SH2B3-202ENST00000538307 FCHSD2O94868 740 aa21.44■■□□□ 1.02
SH2B3-202ENST00000538307 ATF7IPQ6VMQ6 1270 aa21.44■■□□□ 1.02
SH2B3-202ENST00000538307 ATP7BP35670 1465 aa21.43■■□□□ 1.02
SH2B3-202ENST00000538307 WAPLQ7Z5K2 1190 aa21.43■■□□□ 1.02
SH2B3-202ENST00000538307 NOB1Q9ULX3 412 aaKnown RBP21.42■■□□□ 1.02
SH2B3-202ENST00000538307 DDX19BQ9UMR2 479 aa21.42■■□□□ 1.02
SH2B3-202ENST00000538307 POLKQ9UBT6 870 aa21.41■■□□□ 1.02
SH2B3-202ENST00000538307 RIMS2Q9UQ26 1411 aa21.41■■□□□ 1.02
SH2B3-202ENST00000538307 HDGFP51858 240 aaKnown RBP21.41■■□□□ 1.02
SH2B3-202ENST00000538307 HDAC1Q13547 482 aaPredicted RBP21.41■■□□□ 1.02
SH2B3-202ENST00000538307 LRRC7Q96NW7 1537 aa21.41■■□□□ 1.02
SH2B3-202ENST00000538307 SETD1AO15047 1707 aaKnown RBP21.4■■□□□ 1.02
SH2B3-202ENST00000538307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.4■■□□□ 1.02
SH2B3-202ENST00000538307 ITPRIPQ8IWB1 547 aa21.4■■□□□ 1.02
SH2B3-202ENST00000538307 RSPH6AQ9H0K4 717 aa21.4■■□□□ 1.02
SH2B3-202ENST00000538307 FAM135BQ49AJ0 1406 aa21.39■■□□□ 1.02
SH2B3-202ENST00000538307 GSE1Q14687 1217 aa21.39■■□□□ 1.01
SH2B3-202ENST00000538307 BECN1Q14457 450 aa21.38■■□□□ 1.01
SH2B3-202ENST00000538307 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.38■■□□□ 1.01
SH2B3-202ENST00000538307 UPF2Q9HAU5 1272 aaKnown RBP21.38■■□□□ 1.01
SH2B3-202ENST00000538307 KIF16BQ96L93 1317 aa21.38■■□□□ 1.01
SH2B3-202ENST00000538307 PRKAR2BP31323 418 aa21.38■■□□□ 1.01
SH2B3-202ENST00000538307 TBC1D32Q96NH3 1257 aa21.38■■□□□ 1.01
SH2B3-202ENST00000538307 FBLN1P23142 703 aa21.37■■□□□ 1.01
SH2B3-202ENST00000538307 ALDH1L2Q3SY69 923 aa21.37■■□□□ 1.01
SH2B3-202ENST00000538307 IPO8O15397 1037 aaKnown RBP21.36■■□□□ 1.01
SH2B3-202ENST00000538307 THEMISQ8N1K5 641 aaPredicted RBP21.36■■□□□ 1.01
SH2B3-202ENST00000538307 TMEM57Q8N5G2 664 aa21.36■■□□□ 1.01
SH2B3-202ENST00000538307 UBR1Q8IWV7 1749 aa21.36■■□□□ 1.01
SH2B3-202ENST00000538307 FRAT2O75474 233 aaPredicted RBP21.36■■□□□ 1.01
SH2B3-202ENST00000538307 CPSF1Q10570 1443 aaKnown RBP21.35■■□□□ 1.01
SH2B3-202ENST00000538307 ZBTB40Q9NUA8 1239 aa21.35■■□□□ 1.01
SH2B3-202ENST00000538307 SMC5Q8IY18 1101 aa21.34■■□□□ 1.01
SH2B3-202ENST00000538307 TMEM2Q9UHN6 1383 aa21.34■■□□□ 1.01
SH2B3-202ENST00000538307 PPIP5K1Q6PFW1 1433 aa21.34■■□□□ 1.01
SH2B3-202ENST00000538307 EDC4Q6P2E9 1401 aaKnown RBP21.33■■□□□ 1.01
SH2B3-202ENST00000538307 WASLO00401 505 aaPredicted RBP21.33■■□□□ 1
SH2B3-202ENST00000538307 NFE2L2Q16236 605 aa21.33■■□□□ 1
SH2B3-202ENST00000538307 SETD1BQ9UPS6 1966 aaKnown RBP21.33■■□□□ 1
SH2B3-202ENST00000538307 BRPF1P55201 1214 aaPredicted RBP21.32■■□□□ 1
SH2B3-202ENST00000538307 ZNF428Q96B54 188 aa21.32■■□□□ 1
SH2B3-202ENST00000538307 PHACTR3Q96KR7 559 aa21.32■■□□□ 1
SH2B3-202ENST00000538307 EID1Q9Y6B2 187 aa21.32■■□□□ 1
SH2B3-202ENST00000538307 NRXN3Q9Y4C0 1643 aa21.32■■□□□ 1
SH2B3-202ENST00000538307 MAP2P11137 1827 aaKnown RBP21.31■■□□□ 1
SH2B3-202ENST00000538307 KDM4FA0A1W2PPD8 638 aa21.3■■□□□ 1
SH2B3-202ENST00000538307 HMOX1P09601 288 aa21.3■■□□□ 1
SH2B3-202ENST00000538307 IL13P35225 146 aa21.3■■□□□ 1
SH2B3-202ENST00000538307 TXNDC2Q86VQ3 553 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms