RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 FAM83GA6ND36 823 aa11.11□□□□□ -0.63
UBE3B-208ENST00000538070 SEC24BO95487 1268 aa11.11□□□□□ -0.63
UBE3B-208ENST00000538070 COG3Q96JB2 828 aa11.11□□□□□ -0.63
UBE3B-208ENST00000538070 C8orf34Q49A92 452 aa11.11□□□□□ -0.63
UBE3B-208ENST00000538070 DDRGK1Q96HY6 314 aa11.11□□□□□ -0.63
UBE3B-208ENST00000538070 ARXQ96QS3 562 aa11.11□□□□□ -0.63
UBE3B-208ENST00000538070 POLKQ9UBT6 870 aa11.11□□□□□ -0.63
UBE3B-208ENST00000538070 ATAD2Q6PL18 1390 aa11.11□□□□□ -0.63
UBE3B-208ENST00000538070 TRIM35Q9UPQ4 493 aa11.1□□□□□ -0.63
UBE3B-208ENST00000538070 APBB1O00213 710 aa11.1□□□□□ -0.63
UBE3B-208ENST00000538070 RWDD1Q9H446 243 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-208ENST00000538070 QRICH2Q9H0J4 1663 aa11.09□□□□□ -0.63
UBE3B-208ENST00000538070 ADGRB1O14514 1584 aa11.09□□□□□ -0.63
UBE3B-208ENST00000538070 GLI2P10070 1586 aa11.09□□□□□ -0.63
UBE3B-208ENST00000538070 DIP2CQ9Y2E4 1556 aa11.09□□□□□ -0.63
UBE3B-208ENST00000538070 INSRP06213 1382 aa11.09□□□□□ -0.63
UBE3B-208ENST00000538070 TULP4Q9NRJ4 1543 aa11.09□□□□□ -0.63
UBE3B-208ENST00000538070 WASLO00401 505 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-208ENST00000538070 TRIM27P14373 513 aa11.09□□□□□ -0.63
UBE3B-208ENST00000538070 LMTK2Q8IWU2 1503 aa11.09□□□□□ -0.63
UBE3B-208ENST00000538070 TMEM57Q8N5G2 664 aa11.08□□□□□ -0.63
UBE3B-208ENST00000538070 NGEFQ8N5V2 710 aa11.08□□□□□ -0.63
UBE3B-208ENST00000538070 LTV1Q96GA3 475 aaPredicted RBP11.08□□□□□ -0.63
UBE3B-208ENST00000538070 NRXN1Q9ULB1 1477 aa11.08□□□□□ -0.64
UBE3B-208ENST00000538070 RIMS2Q9UQ26 1411 aa11.08□□□□□ -0.64
UBE3B-208ENST00000538070 MFAP1P55081 439 aaKnown RBP11.08□□□□□ -0.64
UBE3B-208ENST00000538070 MVPQ14764 893 aaKnown RBP11.07□□□□□ -0.64
UBE3B-208ENST00000538070 CAMSAP1Q5T5Y3 1602 aa11.07□□□□□ -0.64
UBE3B-208ENST00000538070 UPF2Q9HAU5 1272 aaKnown RBP11.07□□□□□ -0.64
UBE3B-208ENST00000538070 SIGLEC1Q9BZZ2 1709 aa11.07□□□□□ -0.64
UBE3B-208ENST00000538070 AEBP1Q8IUX7 1158 aa11.07□□□□□ -0.64
UBE3B-208ENST00000538070 TSPYL6Q8N831 410 aa11.07□□□□□ -0.64
UBE3B-208ENST00000538070 LNPKQ9C0E8 428 aa11.07□□□□□ -0.64
UBE3B-208ENST00000538070 MIS18AQ9NYP9 233 aa11.07□□□□□ -0.64
UBE3B-208ENST00000538070 METP08581 1390 aa11.07□□□□□ -0.64
UBE3B-208ENST00000538070 SULT6B1Q6IMI4 303 aa11.06□□□□□ -0.64
UBE3B-208ENST00000538070 NGDNQ8NEJ9 315 aaKnown RBP11.06□□□□□ -0.64
UBE3B-208ENST00000538070 NEXMIFQ5QGS0 1516 aa11.06□□□□□ -0.64
UBE3B-208ENST00000538070 ABCC11Q96J66 1382 aa11.06□□□□□ -0.64
UBE3B-208ENST00000538070 PLEKHF1Q96S99 279 aa11.06□□□□□ -0.64
UBE3B-208ENST00000538070 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
UBE3B-208ENST00000538070 CCDC61Q9Y6R9 512 aa11.06□□□□□ -0.64
UBE3B-208ENST00000538070 CFAP74Q9C0B2 1584 aa11.05□□□□□ -0.64
UBE3B-208ENST00000538070 ZMYM3Q14202 1370 aa11.05□□□□□ -0.64
UBE3B-208ENST00000538070 HDGFP51858 240 aaKnown RBP11.05□□□□□ -0.64
UBE3B-208ENST00000538070 ATF7IPQ6VMQ6 1270 aa11.05□□□□□ -0.64
UBE3B-208ENST00000538070 PNNQ9H307 717 aaKnown RBP11.05□□□□□ -0.64
UBE3B-208ENST00000538070 KRT24Q2M2I5 525 aa11.05□□□□□ -0.64
UBE3B-208ENST00000538070 NECTIN2Q92692 538 aa11.05□□□□□ -0.64
UBE3B-208ENST00000538070 PPLO60437 1756 aa11.05□□□□□ -0.64
UBE3B-208ENST00000538070 MCM10Q7L590 875 aa11.04□□□□□ -0.64
UBE3B-208ENST00000538070 PIK3C2BO00750 1634 aa11.04□□□□□ -0.64
UBE3B-208ENST00000538070 KIAA1210Q9ULL0 1709 aa11.04□□□□□ -0.64
UBE3B-208ENST00000538070 FCHSD2O94868 740 aa11.04□□□□□ -0.64
UBE3B-208ENST00000538070 LMOD2Q6P5Q4 547 aa11.04□□□□□ -0.64
UBE3B-208ENST00000538070 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.04□□□□□ -0.64
UBE3B-208ENST00000538070 PPIP5K1Q6PFW1 1433 aa11.04□□□□□ -0.64
UBE3B-208ENST00000538070 IPO8O15397 1037 aaKnown RBP11.03□□□□□ -0.64
UBE3B-208ENST00000538070 LTKP29376 864 aa11.03□□□□□ -0.64
UBE3B-208ENST00000538070 NSD2O96028 1365 aa11.03□□□□□ -0.64
UBE3B-208ENST00000538070 HSP90AB2PQ58FF8 381 aa11.03□□□□□ -0.64
UBE3B-208ENST00000538070 ANKRD45Q5TZF3 282 aa11.03□□□□□ -0.64
UBE3B-208ENST00000538070 NFE2L2Q16236 605 aa11.02□□□□□ -0.64
UBE3B-208ENST00000538070 CCDC27Q2M243 656 aa11.02□□□□□ -0.64
UBE3B-208ENST00000538070 RSPH6AQ9H0K4 717 aa11.02□□□□□ -0.64
UBE3B-208ENST00000538070 DDX19BQ9UMR2 479 aa11.02□□□□□ -0.64
UBE3B-208ENST00000538070 EID1Q9Y6B2 187 aa11.02□□□□□ -0.64
UBE3B-208ENST00000538070 SETBP1Q9Y6X0 1596 aa11.02□□□□□ -0.65
UBE3B-208ENST00000538070 NFKBIBQ15653 356 aa11.02□□□□□ -0.65
UBE3B-208ENST00000538070 MYO5BQ9ULV0 1848 aa11.02□□□□□ -0.65
UBE3B-208ENST00000538070 FRAT2O75474 233 aaPredicted RBP11.01□□□□□ -0.65
UBE3B-208ENST00000538070 PUS7Q96PZ0 661 aaKnown RBP11.01□□□□□ -0.65
UBE3B-208ENST00000538070 ACEP12821 1306 aa11.01□□□□□ -0.65
UBE3B-208ENST00000538070 AMPHP49418 695 aa11.01□□□□□ -0.65
UBE3B-208ENST00000538070 TWISTNBQ3B726 338 aaPredicted RBP11.01□□□□□ -0.65
UBE3B-208ENST00000538070 SLC4A10Q6U841 1118 aa11.01□□□□□ -0.65
UBE3B-208ENST00000538070 C8orf58Q8NAV2 365 aa11.01□□□□□ -0.65
UBE3B-208ENST00000538070 PHF23Q9BUL5 403 aaPredicted RBP11.01□□□□□ -0.65
UBE3B-208ENST00000538070 MBIPQ9NS73 344 aa11.01□□□□□ -0.65
UBE3B-208ENST00000538070 ARHGAP31Q2M1Z3 1444 aa11.01□□□□□ -0.65
UBE3B-208ENST00000538070 PTPRMP28827 1452 aa11.01□□□□□ -0.65
UBE3B-208ENST00000538070 IFT172Q9UG01 1749 aa11□□□□□ -0.65
UBE3B-208ENST00000538070 AMOTL2Q9Y2J4 779 aa11□□□□□ -0.65
UBE3B-208ENST00000538070 FOXO3O43524 673 aa10.99□□□□□ -0.65
UBE3B-208ENST00000538070 FOXD4L1Q9NU39 408 aa10.99□□□□□ -0.65
UBE3B-208ENST00000538070 PRR36Q9H6K5 1346 aa10.99□□□□□ -0.65
UBE3B-208ENST00000538070 ALKQ9UM73 1620 aa10.99□□□□□ -0.65
UBE3B-208ENST00000538070 TNRQ92752 1358 aa10.99□□□□□ -0.65
UBE3B-208ENST00000538070 IL13P35225 146 aa10.98□□□□□ -0.65
UBE3B-208ENST00000538070 GNAI1P63096 354 aa10.98□□□□□ -0.65
UBE3B-208ENST00000538070 BECN1Q14457 450 aa10.98□□□□□ -0.65
UBE3B-208ENST00000538070 A2ML1A8K2U0 1454 aa10.98□□□□□ -0.65
UBE3B-208ENST00000538070 NLRP6P59044 892 aa10.98□□□□□ -0.65
UBE3B-208ENST00000538070 EIF4A2Q14240 407 aaKnown RBP10.97□□□□□ -0.65
UBE3B-208ENST00000538070 KIF16BQ96L93 1317 aa10.97□□□□□ -0.65
UBE3B-208ENST00000538070 ARHGEF28Q8N1W1 1705 aaKnown RBP10.97□□□□□ -0.65
UBE3B-208ENST00000538070 ZNF428Q96B54 188 aa10.97□□□□□ -0.65
UBE3B-208ENST00000538070 NINLQ9Y2I6 1382 aa10.97□□□□□ -0.65
UBE3B-208ENST00000538070 VAMP4O75379 141 aa10.97□□□□□ -0.65
UBE3B-208ENST00000538070 XPCQ01831 940 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms