RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 UPF2Q9HAU5 1272 aaKnown RBP17.87■□□□□ 0.45
CLPB-209ENST00000538039 ZBTB40Q9NUA8 1239 aa17.87■□□□□ 0.45
CLPB-209ENST00000538039 MCM4P33991 863 aa17.87■□□□□ 0.45
CLPB-209ENST00000538039 NEXMIFQ5QGS0 1516 aa17.86■□□□□ 0.45
CLPB-209ENST00000538039 MINK1Q8N4C8 1332 aaPredicted RBP17.86■□□□□ 0.45
CLPB-209ENST00000538039 RIPK4P57078 832 aa17.86■□□□□ 0.45
CLPB-209ENST00000538039 HDAC1Q13547 482 aaPredicted RBP17.86■□□□□ 0.45
CLPB-209ENST00000538039 CD163L1Q9NR16 1453 aa17.86■□□□□ 0.45
CLPB-209ENST00000538039 SRPK2P78362 688 aaKnown RBP17.86■□□□□ 0.45
CLPB-209ENST00000538039 FAM43AQ8N2R8 423 aa17.86■□□□□ 0.45
CLPB-209ENST00000538039 THUMPD2Q9BTF0 503 aaKnown RBP17.86■□□□□ 0.45
CLPB-209ENST00000538039 ABCC3O15438 1527 aa17.86■□□□□ 0.45
CLPB-209ENST00000538039 AAMPQ13685 434 aa17.85■□□□□ 0.45
CLPB-209ENST00000538039 SMC5Q8IY18 1101 aa17.85■□□□□ 0.45
CLPB-209ENST00000538039 ABCC11Q96J66 1382 aa17.85■□□□□ 0.45
CLPB-209ENST00000538039 LNPKQ9C0E8 428 aa17.85■□□□□ 0.45
CLPB-209ENST00000538039 C1orf115Q9H7X2 142 aa17.84■□□□□ 0.45
CLPB-209ENST00000538039 ZMYM3Q14202 1370 aa17.84■□□□□ 0.45
CLPB-209ENST00000538039 EIF5BO60841 1220 aaKnown RBP17.83■□□□□ 0.45
CLPB-209ENST00000538039 CD2BP2O95400 341 aaKnown RBP17.83■□□□□ 0.45
CLPB-209ENST00000538039 HECW2Q9P2P5 1572 aa17.83■□□□□ 0.44
CLPB-209ENST00000538039 FSD2A1L4K1 749 aa17.82■□□□□ 0.44
CLPB-209ENST00000538039 MYO5BQ9ULV0 1848 aa17.82■□□□□ 0.44
CLPB-209ENST00000538039 PHACTR3Q96KR7 559 aa17.82■□□□□ 0.44
CLPB-209ENST00000538039 POGZQ7Z3K3 1410 aa17.81■□□□□ 0.44
CLPB-209ENST00000538039 RPGRIP1LQ68CZ1 1315 aa17.81■□□□□ 0.44
CLPB-209ENST00000538039 TSPYL6Q8N831 410 aa17.81■□□□□ 0.44
CLPB-209ENST00000538039 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
CLPB-209ENST00000538039 DDX19BQ9UMR2 479 aa17.81■□□□□ 0.44
CLPB-209ENST00000538039 KIF2CQ99661 725 aa17.81■□□□□ 0.44
CLPB-209ENST00000538039 DDIT3P35638 169 aa17.8■□□□□ 0.44
CLPB-209ENST00000538039 VGFO15240 615 aaPredicted RBP17.8■□□□□ 0.44
CLPB-209ENST00000538039 PIK3C2BO00750 1634 aa17.8■□□□□ 0.44
CLPB-209ENST00000538039 NSD2O96028 1365 aa17.79■□□□□ 0.44
CLPB-209ENST00000538039 NUCB1Q02818 461 aa17.79■□□□□ 0.44
CLPB-209ENST00000538039 ELL2O00472 640 aaPredicted RBP17.79■□□□□ 0.44
CLPB-209ENST00000538039 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
CLPB-209ENST00000538039 TRAK2O60296 914 aa17.78■□□□□ 0.44
CLPB-209ENST00000538039 PTPRMP28827 1452 aa17.78■□□□□ 0.44
CLPB-209ENST00000538039 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
CLPB-209ENST00000538039 SIRT2Q8IXJ6 389 aa17.78■□□□□ 0.44
CLPB-209ENST00000538039 FOXD4L1Q9NU39 408 aa17.78■□□□□ 0.44
CLPB-209ENST00000538039 CABP1Q9NZU7 370 aa17.78■□□□□ 0.44
CLPB-209ENST00000538039 PUS7Q96PZ0 661 aaKnown RBP17.78■□□□□ 0.44
CLPB-209ENST00000538039 HMOX1P09601 288 aa17.77■□□□□ 0.44
CLPB-209ENST00000538039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.77■□□□□ 0.44
CLPB-209ENST00000538039 CHMP5Q9NZZ3 219 aa17.77■□□□□ 0.43
CLPB-209ENST00000538039 MLH3Q9UHC1 1453 aa17.77■□□□□ 0.43
CLPB-209ENST00000538039 PPIP5K1Q6PFW1 1433 aa17.76■□□□□ 0.43
CLPB-209ENST00000538039 ATAD2Q6PL18 1390 aa17.76■□□□□ 0.43
CLPB-209ENST00000538039 DIAPH1O60610 1272 aaKnown RBP17.76■□□□□ 0.43
CLPB-209ENST00000538039 CT47B1P0C2W7 299 aaPredicted RBP17.76■□□□□ 0.43
CLPB-209ENST00000538039 PRKAR2BP31323 418 aa17.76■□□□□ 0.43
CLPB-209ENST00000538039 FBXO31Q5XUX0 539 aaPredicted RBP17.75■□□□□ 0.43
CLPB-209ENST00000538039 CHD1LQ86WJ1 897 aa17.75■□□□□ 0.43
CLPB-209ENST00000538039 ZRANB1Q9UGI0 708 aa17.75■□□□□ 0.43
CLPB-209ENST00000538039 PNPLA6Q8IY17 1366 aa17.75■□□□□ 0.43
CLPB-209ENST00000538039 ZBTB7BO15156 539 aaPredicted RBP17.75■□□□□ 0.43
CLPB-209ENST00000538039 GAS2L3Q86XJ1 694 aa17.74■□□□□ 0.43
CLPB-209ENST00000538039 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
CLPB-209ENST00000538039 LRRC7Q96NW7 1537 aa17.74■□□□□ 0.43
CLPB-209ENST00000538039 GOLGA6L3A6NEY3 463 aa17.74■□□□□ 0.43
CLPB-209ENST00000538039 CDK19Q9BWU1 502 aa17.74■□□□□ 0.43
CLPB-209ENST00000538039 POLKQ9UBT6 870 aa17.74■□□□□ 0.43
CLPB-209ENST00000538039 NCOA3Q9Y6Q9 1424 aa17.74■□□□□ 0.43
CLPB-209ENST00000538039 RBM25P49756 843 aaKnown RBP17.73■□□□□ 0.43
CLPB-209ENST00000538039 VAMP4O75379 141 aa17.73■□□□□ 0.43
CLPB-209ENST00000538039 ANKRD45Q5TZF3 282 aa17.73■□□□□ 0.43
CLPB-209ENST00000538039 WAPLQ7Z5K2 1190 aa17.73■□□□□ 0.43
CLPB-209ENST00000538039 TNPO1Q92973 898 aaKnown RBP17.73■□□□□ 0.43
CLPB-209ENST00000538039 IL16Q14005 1332 aa17.72■□□□□ 0.43
CLPB-209ENST00000538039 L1TD1Q5T7N2 865 aaKnown RBP17.71■□□□□ 0.43
CLPB-209ENST00000538039 EMILIN1Q9Y6C2 1016 aa17.71■□□□□ 0.43
CLPB-209ENST00000538039 HSCBQ8IWL3 235 aa17.7■□□□□ 0.42
CLPB-209ENST00000538039 MRPL50Q8N5N7 158 aaKnown RBP17.7■□□□□ 0.42
CLPB-209ENST00000538039 FAM83GA6ND36 823 aa17.7■□□□□ 0.42
CLPB-209ENST00000538039 ANKRD26Q9UPS8 1709 aa17.7■□□□□ 0.42
CLPB-209ENST00000538039 ERBB4Q15303 1308 aa17.7■□□□□ 0.42
CLPB-209ENST00000538039 NCKAP5LQ9HCH0 1330 aa17.7■□□□□ 0.42
CLPB-209ENST00000538039 YTHDC2Q9H6S0 1430 aaKnown RBP17.69■□□□□ 0.42
CLPB-209ENST00000538039 YEATS2Q9ULM3 1422 aa17.69■□□□□ 0.42
CLPB-209ENST00000538039 MED14O60244 1454 aa17.69■□□□□ 0.42
CLPB-209ENST00000538039 TBC1D9Q6ZT07 1266 aa17.69■□□□□ 0.42
CLPB-209ENST00000538039 TERF2IPQ9NYB0 399 aa17.69■□□□□ 0.42
CLPB-209ENST00000538039 KIF16BQ96L93 1317 aa17.68■□□□□ 0.42
CLPB-209ENST00000538039 FAM135BQ49AJ0 1406 aa17.68■□□□□ 0.42
CLPB-209ENST00000538039 AK9Q5TCS8 1911 aa17.68■□□□□ 0.42
CLPB-209ENST00000538039 DCTN1Q14203 1278 aa17.68■□□□□ 0.42
CLPB-209ENST00000538039 C8orf58Q8NAV2 365 aa17.68■□□□□ 0.42
CLPB-209ENST00000538039 MBIPQ9NS73 344 aa17.68■□□□□ 0.42
CLPB-209ENST00000538039 ALDH1L2Q3SY69 923 aa17.67■□□□□ 0.42
CLPB-209ENST00000538039 DIP2CQ9Y2E4 1556 aa17.67■□□□□ 0.42
CLPB-209ENST00000538039 FCHSD2O94868 740 aa17.67■□□□□ 0.42
CLPB-209ENST00000538039 C16orf71Q8IYS4 520 aaPredicted RBP17.67■□□□□ 0.42
CLPB-209ENST00000538039 ARHGEF40Q8TER5 1519 aa17.67■□□□□ 0.42
CLPB-209ENST00000538039 TMEM131LA2VDJ0 1609 aa17.67■□□□□ 0.42
CLPB-209ENST00000538039 MAP2P11137 1827 aaKnown RBP17.66■□□□□ 0.42
CLPB-209ENST00000538039 SNX21Q969T3 373 aa17.66■□□□□ 0.42
CLPB-209ENST00000538039 IPO8O15397 1037 aaKnown RBP17.66■□□□□ 0.42
CLPB-209ENST00000538039 GSPT1P15170 499 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms