RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 PRPF40AO75400 957 aaKnown RBP10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 PWP2Q15269 919 aaKnown RBP10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 KIF18AQ8NI77 898 aa10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 GOLGA6L6A8MZA4 724 aa10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 HAP1P54257 671 aaPredicted RBP10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 SYAP1Q96A49 352 aaPredicted RBP10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 ZBTB9Q96C00 473 aa10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 CHMP4CQ96CF2 233 aa10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 BRMS1Q9HCU9 246 aa10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 NCAPGQ9BPX3 1015 aa10.36□□□□□ -0.75
SRGAP1-202ENST00000537556 EIF4G3O43432 1585 aaKnown RBP10.36□□□□□ -0.75
SRGAP1-202ENST00000537556 PHF14O94880 888 aa10.36□□□□□ -0.75
SRGAP1-202ENST00000537556 RAD51AP2Q09MP3 1159 aa10.36□□□□□ -0.75
SRGAP1-202ENST00000537556 GPT2Q8TD30 523 aa10.36□□□□□ -0.75
SRGAP1-202ENST00000537556 SMC4Q9NTJ3 1288 aa10.36□□□□□ -0.75
SRGAP1-202ENST00000537556 PATL2C9JE40 543 aaKnown RBP10.35□□□□□ -0.75
SRGAP1-202ENST00000537556 CDCA8Q53HL2 280 aa10.35□□□□□ -0.75
SRGAP1-202ENST00000537556 GAS2L2Q8NHY3 880 aa10.35□□□□□ -0.75
SRGAP1-202ENST00000537556 TTC12Q9H892 705 aaPredicted RBP10.35□□□□□ -0.75
SRGAP1-202ENST00000537556 TMEM63CQ9P1W3 806 aa10.35□□□□□ -0.75
SRGAP1-202ENST00000537556 RBM27Q9P2N5 1060 aaKnown RBP10.35□□□□□ -0.75
SRGAP1-202ENST00000537556 NOP2P46087 812 aaKnown RBP10.35□□□□□ -0.75
SRGAP1-202ENST00000537556 HNRNPH2P55795 449 aaKnown RBP10.35□□□□□ -0.75
SRGAP1-202ENST00000537556 CNKSR2Q8WXI2 1034 aa10.35□□□□□ -0.75
SRGAP1-202ENST00000537556 CWC22Q9HCG8 908 aaKnown RBP10.35□□□□□ -0.75
SRGAP1-202ENST00000537556 ICE2Q659A1 982 aa10.35□□□□□ -0.75
SRGAP1-202ENST00000537556 TRERF1Q96PN7 1200 aa10.35□□□□□ -0.75
SRGAP1-202ENST00000537556 SLC26A8Q96RN1 970 aa10.35□□□□□ -0.75
SRGAP1-202ENST00000537556 DHX16O60231 1041 aaKnown RBP10.34□□□□□ -0.75
SRGAP1-202ENST00000537556 CYP2C19P33261 490 aa10.34□□□□□ -0.75
SRGAP1-202ENST00000537556 BANK1Q8NDB2 785 aa10.34□□□□□ -0.75
SRGAP1-202ENST00000537556 KIAA1524Q8TCG1 905 aa10.34□□□□□ -0.75
SRGAP1-202ENST00000537556 CYP2E1P05181 493 aaPredicted RBP10.34□□□□□ -0.75
SRGAP1-202ENST00000537556 POLA1P09884 1462 aaPredicted RBP10.34□□□□□ -0.75
SRGAP1-202ENST00000537556 BRPF1P55201 1214 aaPredicted RBP10.33□□□□□ -0.76
SRGAP1-202ENST00000537556 CAMSAP2Q08AD1 1489 aa10.33□□□□□ -0.76
SRGAP1-202ENST00000537556 EHBP1L1Q8N3D4 1523 aa10.33□□□□□ -0.76
SRGAP1-202ENST00000537556 SMTNL1A8MU46 457 aa10.33□□□□□ -0.76
SRGAP1-202ENST00000537556 REC8O95072 547 aa10.33□□□□□ -0.76
SRGAP1-202ENST00000537556 C17orf53Q8N3J3 647 aaPredicted RBP10.33□□□□□ -0.76
SRGAP1-202ENST00000537556 CEP120Q8N960 986 aa10.33□□□□□ -0.76
SRGAP1-202ENST00000537556 ROCK1Q13464 1354 aa10.32□□□□□ -0.76
SRGAP1-202ENST00000537556 GOLGA6L1Q8N7Z2 621 aa10.32□□□□□ -0.76
SRGAP1-202ENST00000537556 ZNF397Q8NF99 534 aaPredicted RBP10.32□□□□□ -0.76
SRGAP1-202ENST00000537556 CARD10Q9BWT7 1032 aa10.32□□□□□ -0.76
SRGAP1-202ENST00000537556 KIF2CQ99661 725 aa10.32□□□□□ -0.76
SRGAP1-202ENST00000537556 NOL10Q9BSC4 688 aaKnown RBP10.32□□□□□ -0.76
SRGAP1-202ENST00000537556 CEP83Q9Y592 693 aa10.32□□□□□ -0.76
SRGAP1-202ENST00000537556 PLXNC1O60486 1568 aa10.32□□□□□ -0.76
SRGAP1-202ENST00000537556 UGGT2Q9NYU1 1516 aa10.32□□□□□ -0.76
SRGAP1-202ENST00000537556 SPINK5Q9NQ38 1064 aaPredicted RBP10.32□□□□□ -0.76
SRGAP1-202ENST00000537556 PAXBP1Q9Y5B6 917 aa10.32□□□□□ -0.76
SRGAP1-202ENST00000537556 CD2BP2O95400 341 aaKnown RBP10.31□□□□□ -0.76
SRGAP1-202ENST00000537556 SIRT1Q96EB6 747 aa10.31□□□□□ -0.76
SRGAP1-202ENST00000537556 FAM53CQ9NYF3 392 aa10.31□□□□□ -0.76
SRGAP1-202ENST00000537556 ADCY5O95622 1261 aa10.31□□□□□ -0.76
SRGAP1-202ENST00000537556 GUCY2CP25092 1073 aa10.31□□□□□ -0.76
SRGAP1-202ENST00000537556 MUM1L1Q5H9M0 696 aa10.31□□□□□ -0.76
SRGAP1-202ENST00000537556 CCDC172P0C7W6 258 aa10.3□□□□□ -0.76
SRGAP1-202ENST00000537556 CASQ1P31415 396 aa10.3□□□□□ -0.76
SRGAP1-202ENST00000537556 GRIPAP1Q4V328 841 aa10.3□□□□□ -0.76
SRGAP1-202ENST00000537556 TEX35Q5T0J7 233 aa10.3□□□□□ -0.76
SRGAP1-202ENST00000537556 TXLNBQ8N3L3 684 aa10.3□□□□□ -0.76
SRGAP1-202ENST00000537556 USP25Q9UHP3 1055 aa10.3□□□□□ -0.76
SRGAP1-202ENST00000537556 HDAC1Q13547 482 aaPredicted RBP10.29□□□□□ -0.76
SRGAP1-202ENST00000537556 MPNDQ8N594 471 aa10.29□□□□□ -0.76
SRGAP1-202ENST00000537556 CCDC112Q8NEF3 446 aa10.29□□□□□ -0.76
SRGAP1-202ENST00000537556 RAD50Q92878 1312 aa10.29□□□□□ -0.76
SRGAP1-202ENST00000537556 SNAPC4Q5SXM2 1469 aa10.29□□□□□ -0.76
SRGAP1-202ENST00000537556 ARHGEF12Q9NZN5 1544 aa10.29□□□□□ -0.76
SRGAP1-202ENST00000537556 CWC15Q9P013 229 aaKnown RBP10.29□□□□□ -0.76
SRGAP1-202ENST00000537556 APAF1O14727 1248 aa10.29□□□□□ -0.76
SRGAP1-202ENST00000537556 RABEP1Q15276 862 aa10.29□□□□□ -0.76
SRGAP1-202ENST00000537556 ANKRD36BQ8N2N9 1353 aa10.28□□□□□ -0.76
SRGAP1-202ENST00000537556 ARHGEF11O15085 1522 aa10.28□□□□□ -0.76
SRGAP1-202ENST00000537556 PPP2R1AP30153 589 aa10.28□□□□□ -0.76
SRGAP1-202ENST00000537556 KIF1BPQ96EK5 621 aa10.28□□□□□ -0.76
SRGAP1-202ENST00000537556 PRR29P0C7W0 189 aa10.28□□□□□ -0.76
SRGAP1-202ENST00000537556 BMS1Q14692 1282 aaKnown RBP10.28□□□□□ -0.76
SRGAP1-202ENST00000537556 UHRF1BP1LA0JNW5 1464 aa10.28□□□□□ -0.76
SRGAP1-202ENST00000537556 SHROOM2Q13796 1616 aa10.28□□□□□ -0.76
SRGAP1-202ENST00000537556 HTATSF1O43719 755 aaKnown RBP10.27□□□□□ -0.76
SRGAP1-202ENST00000537556 RARSP54136 660 aaKnown RBP10.27□□□□□ -0.76
SRGAP1-202ENST00000537556 MVPQ14764 893 aaKnown RBP10.27□□□□□ -0.76
SRGAP1-202ENST00000537556 FAM135AQ9P2D6 1515 aa10.27□□□□□ -0.77
SRGAP1-202ENST00000537556 NOM1Q5C9Z4 860 aaKnown RBP10.27□□□□□ -0.77
SRGAP1-202ENST00000537556 BMP2KLQ5H9B9 411 aa10.27□□□□□ -0.77
SRGAP1-202ENST00000537556 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.27□□□□□ -0.77
SRGAP1-202ENST00000537556 SLFNL1Q499Z3 407 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 SAMD9Q5K651 1589 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 MYO1CO00159 1063 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 KDM4AO75164 1064 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 RLBP1P12271 317 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 SATB1Q01826 763 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 GPS2Q13227 327 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 MLECQ14165 292 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 CT47A1Q5JQC4 288 aaPredicted RBP10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 C10orf67Q8IYJ2 551 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 OSCARQ8IYS5 282 aa10.26□□□□□ -0.77
SRGAP1-202ENST00000537556 CFAP44Q96MT7 982 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms