RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 CCDC27Q2M243 656 aa16.62■□□□□ 0.25
TRIM25-202ENST00000537230 TSR2Q969E8 191 aaKnown RBP16.62■□□□□ 0.25
TRIM25-202ENST00000537230 ADGRB2O60241 1585 aa16.62■□□□□ 0.25
TRIM25-202ENST00000537230 ANKRD26Q9UPS8 1709 aa16.62■□□□□ 0.25
TRIM25-202ENST00000537230 PDE3AQ14432 1141 aa16.62■□□□□ 0.25
TRIM25-202ENST00000537230 USP35Q9P2H5 1018 aa16.62■□□□□ 0.25
TRIM25-202ENST00000537230 SLC4A3P48751 1232 aa16.61■□□□□ 0.25
TRIM25-202ENST00000537230 RTN4Q9NQC3 1192 aaKnown RBP16.61■□□□□ 0.25
TRIM25-202ENST00000537230 KIF13AQ9H1H9 1805 aa16.61■□□□□ 0.25
TRIM25-202ENST00000537230 PPM1GO15355 546 aaPredicted RBP16.6■□□□□ 0.25
TRIM25-202ENST00000537230 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
TRIM25-202ENST00000537230 HDGFL2Q7Z4V5 671 aaPredicted RBP16.6■□□□□ 0.25
TRIM25-202ENST00000537230 CLUAP1Q96AJ1 413 aa16.6■□□□□ 0.25
TRIM25-202ENST00000537230 METP08581 1390 aa16.6■□□□□ 0.25
TRIM25-202ENST00000537230 NRXN3Q9Y4C0 1643 aa16.59■□□□□ 0.25
TRIM25-202ENST00000537230 NCKAP5LQ9HCH0 1330 aa16.59■□□□□ 0.25
TRIM25-202ENST00000537230 TRIM35Q9UPQ4 493 aa16.59■□□□□ 0.25
TRIM25-202ENST00000537230 TMPOP42166 694 aaKnown RBP16.59■□□□□ 0.25
TRIM25-202ENST00000537230 C8orf34Q49A92 452 aa16.58■□□□□ 0.24
TRIM25-202ENST00000537230 KIF20BQ96Q89 1820 aa16.58■□□□□ 0.24
TRIM25-202ENST00000537230 TXNDC2Q86VQ3 553 aa16.58■□□□□ 0.24
TRIM25-202ENST00000537230 MED14O60244 1454 aa16.58■□□□□ 0.24
TRIM25-202ENST00000537230 ZMYM3Q14202 1370 aa16.57■□□□□ 0.24
TRIM25-202ENST00000537230 DDRGK1Q96HY6 314 aa16.57■□□□□ 0.24
TRIM25-202ENST00000537230 DIAPH1O60610 1272 aaKnown RBP16.56■□□□□ 0.24
TRIM25-202ENST00000537230 MYH16Q9H6N6 1097 aa16.56■□□□□ 0.24
TRIM25-202ENST00000537230 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
TRIM25-202ENST00000537230 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
TRIM25-202ENST00000537230 PNPLA6Q8IY17 1366 aa16.55■□□□□ 0.24
TRIM25-202ENST00000537230 PCDHB15Q9Y5E8 787 aa16.55■□□□□ 0.24
TRIM25-202ENST00000537230 EXOSC9Q06265 439 aaKnown RBP16.54■□□□□ 0.24
TRIM25-202ENST00000537230 POLKQ9UBT6 870 aa16.54■□□□□ 0.24
TRIM25-202ENST00000537230 MAP2P11137 1827 aaKnown RBP16.54■□□□□ 0.24
TRIM25-202ENST00000537230 MAPK8IP3Q9UPT6 1336 aa16.54■□□□□ 0.24
TRIM25-202ENST00000537230 FAM161AQ3B820 660 aa16.53■□□□□ 0.24
TRIM25-202ENST00000537230 RIPK4P57078 832 aa16.53■□□□□ 0.24
TRIM25-202ENST00000537230 ESF1Q9H501 851 aaKnown RBP16.53■□□□□ 0.24
TRIM25-202ENST00000537230 WASLO00401 505 aaPredicted RBP16.52■□□□□ 0.24
TRIM25-202ENST00000537230 NFKBIBQ15653 356 aa16.52■□□□□ 0.24
TRIM25-202ENST00000537230 NME9Q86XW9 330 aa16.52■□□□□ 0.24
TRIM25-202ENST00000537230 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.24
TRIM25-202ENST00000537230 PPIP5K1Q6PFW1 1433 aa16.51■□□□□ 0.23
TRIM25-202ENST00000537230 NCBP3Q53F19 620 aaKnown RBP16.51■□□□□ 0.23
TRIM25-202ENST00000537230 ATP7BP35670 1465 aa16.51■□□□□ 0.23
TRIM25-202ENST00000537230 LRRC7Q96NW7 1537 aa16.51■□□□□ 0.23
TRIM25-202ENST00000537230 HMOX1P09601 288 aa16.5■□□□□ 0.23
TRIM25-202ENST00000537230 SSH1Q8WYL5 1049 aa16.49■□□□□ 0.23
TRIM25-202ENST00000537230 CPSF1Q10570 1443 aaKnown RBP16.49■□□□□ 0.23
TRIM25-202ENST00000537230 PRKAR2BP31323 418 aa16.49■□□□□ 0.23
TRIM25-202ENST00000537230 NUDT16Q96DE0 195 aaKnown RBP16.49■□□□□ 0.23
TRIM25-202ENST00000537230 PHACTR3Q96KR7 559 aa16.49■□□□□ 0.23
TRIM25-202ENST00000537230 DAXXQ9UER7 740 aaPredicted RBP16.49■□□□□ 0.23
TRIM25-202ENST00000537230 RSPH6AQ9H0K4 717 aa16.48■□□□□ 0.23
TRIM25-202ENST00000537230 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
TRIM25-202ENST00000537230 CPS1P31327 1500 aa16.48■□□□□ 0.23
TRIM25-202ENST00000537230 GSE1Q14687 1217 aa16.47■□□□□ 0.23
TRIM25-202ENST00000537230 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRIM25-202ENST00000537230 TNRQ92752 1358 aa16.47■□□□□ 0.23
TRIM25-202ENST00000537230 THUMPD2Q9BTF0 503 aaKnown RBP16.47■□□□□ 0.23
TRIM25-202ENST00000537230 PRR36Q9H6K5 1346 aa16.47■□□□□ 0.23
TRIM25-202ENST00000537230 TRIM27P14373 513 aa16.46■□□□□ 0.23
TRIM25-202ENST00000537230 ZKSCAN2Q63HK3 967 aa16.46■□□□□ 0.23
TRIM25-202ENST00000537230 FCHSD2O94868 740 aa16.46■□□□□ 0.23
TRIM25-202ENST00000537230 MVPQ14764 893 aaKnown RBP16.46■□□□□ 0.23
TRIM25-202ENST00000537230 RRS1Q15050 365 aaKnown RBP16.46■□□□□ 0.23
TRIM25-202ENST00000537230 BRPF3Q9ULD4 1205 aa16.46■□□□□ 0.23
TRIM25-202ENST00000537230 CEBPAP49715 358 aaPredicted RBP16.46■□□□□ 0.22
TRIM25-202ENST00000537230 EDC4Q6P2E9 1401 aaKnown RBP16.45■□□□□ 0.22
TRIM25-202ENST00000537230 NUTM2FA1L443 756 aa16.45■□□□□ 0.22
TRIM25-202ENST00000537230 SEC24BO95487 1268 aa16.45■□□□□ 0.22
TRIM25-202ENST00000537230 FAM135BQ49AJ0 1406 aa16.45■□□□□ 0.22
TRIM25-202ENST00000537230 DZIP1LQ8IYY4 767 aaKnown RBP16.45■□□□□ 0.22
TRIM25-202ENST00000537230 UBE2Q2Q8WVN8 375 aa16.45■□□□□ 0.22
TRIM25-202ENST00000537230 ROBO2Q9HCK4 1378 aa16.45■□□□□ 0.22
TRIM25-202ENST00000537230 UBR1Q8IWV7 1749 aa16.45■□□□□ 0.22
TRIM25-202ENST00000537230 CDC42BPGQ6DT37 1551 aa16.45■□□□□ 0.22
TRIM25-202ENST00000537230 TMEM2Q9UHN6 1383 aa16.45■□□□□ 0.22
TRIM25-202ENST00000537230 FTSJ3Q8IY81 847 aaKnown RBP16.45■□□□□ 0.22
TRIM25-202ENST00000537230 LTKP29376 864 aa16.44■□□□□ 0.22
TRIM25-202ENST00000537230 CCDC61Q9Y6R9 512 aa16.44■□□□□ 0.22
TRIM25-202ENST00000537230 NOB1Q9ULX3 412 aaKnown RBP16.43■□□□□ 0.22
TRIM25-202ENST00000537230 IL16Q14005 1332 aa16.43■□□□□ 0.22
TRIM25-202ENST00000537230 IL13P35225 146 aa16.43■□□□□ 0.22
TRIM25-202ENST00000537230 TECPR2O15040 1411 aa16.43■□□□□ 0.22
TRIM25-202ENST00000537230 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
TRIM25-202ENST00000537230 VIRMAQ69YN4 1812 aaKnown RBP16.42■□□□□ 0.22
TRIM25-202ENST00000537230 CT47B1P0C2W7 299 aaPredicted RBP16.42■□□□□ 0.22
TRIM25-202ENST00000537230 PMFBP1Q8TBY8 1022 aa16.42■□□□□ 0.22
TRIM25-202ENST00000537230 PDZRN3Q9UPQ7 1066 aa16.42■□□□□ 0.22
TRIM25-202ENST00000537230 ADAMTS13Q76LX8 1427 aa16.42■□□□□ 0.22
TRIM25-202ENST00000537230 KNDC1Q76NI1 1749 aa16.42■□□□□ 0.22
TRIM25-202ENST00000537230 USP19O94966 1318 aa16.41■□□□□ 0.22
TRIM25-202ENST00000537230 MON2Q7Z3U7 1717 aa16.41■□□□□ 0.22
TRIM25-202ENST00000537230 ATF7IPQ6VMQ6 1270 aa16.41■□□□□ 0.22
TRIM25-202ENST00000537230 FRAT2O75474 233 aaPredicted RBP16.4■□□□□ 0.22
TRIM25-202ENST00000537230 ITPRIPQ8IWB1 547 aa16.4■□□□□ 0.22
TRIM25-202ENST00000537230 SLC26A8Q96RN1 970 aa16.4■□□□□ 0.22
TRIM25-202ENST00000537230 COG3Q96JB2 828 aa16.4■□□□□ 0.22
TRIM25-202ENST00000537230 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.4■□□□□ 0.22
TRIM25-202ENST00000537230 PNNQ9H307 717 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms