RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 CD109Q6YHK3 1445 aa15.27■□□□□ 0.03
PTCD2-211ENST00000536805 TRAK2O60296 914 aa15.25■□□□□ 0.03
PTCD2-211ENST00000536805 ATF7IPQ6VMQ6 1270 aa15.25■□□□□ 0.03
PTCD2-211ENST00000536805 PIK3C2BO00750 1634 aa15.25■□□□□ 0.03
PTCD2-211ENST00000536805 MED14O60244 1454 aa15.25■□□□□ 0.03
PTCD2-211ENST00000536805 RBM25P49756 843 aaKnown RBP15.25■□□□□ 0.03
PTCD2-211ENST00000536805 MRE11P49959 708 aa15.25■□□□□ 0.03
PTCD2-211ENST00000536805 SNX21Q969T3 373 aa15.25■□□□□ 0.03
PTCD2-211ENST00000536805 PLEKHF1Q96S99 279 aa15.25■□□□□ 0.03
PTCD2-211ENST00000536805 ZNF692Q9BU19 519 aaPredicted RBP15.25■□□□□ 0.03
PTCD2-211ENST00000536805 CAMSAP1Q5T5Y3 1602 aa15.24■□□□□ 0.03
PTCD2-211ENST00000536805 DDIT3P35638 169 aa15.24■□□□□ 0.03
PTCD2-211ENST00000536805 EXOSC9Q06265 439 aaKnown RBP15.24■□□□□ 0.03
PTCD2-211ENST00000536805 KIF16BQ96L93 1317 aa15.24■□□□□ 0.03
PTCD2-211ENST00000536805 CFAP74Q9C0B2 1584 aa15.24■□□□□ 0.03
PTCD2-211ENST00000536805 TMPOP42166 694 aaKnown RBP15.23■□□□□ 0.03
PTCD2-211ENST00000536805 ITPRIPQ8IWB1 547 aa15.23■□□□□ 0.03
PTCD2-211ENST00000536805 SSH1Q8WYL5 1049 aa15.23■□□□□ 0.03
PTCD2-211ENST00000536805 FRMPD1Q5SYB0 1578 aa15.23■□□□□ 0.03
PTCD2-211ENST00000536805 CLCN1P35523 988 aa15.23■□□□□ 0.03
PTCD2-211ENST00000536805 TSR2Q969E8 191 aaKnown RBP15.23■□□□□ 0.03
PTCD2-211ENST00000536805 CIZ1Q9ULV3 898 aaPredicted RBP15.23■□□□□ 0.03
PTCD2-211ENST00000536805 NEXMIFQ5QGS0 1516 aa15.22■□□□□ 0.03
PTCD2-211ENST00000536805 CHGAP10645 457 aaKnown RBP15.22■□□□□ 0.03
PTCD2-211ENST00000536805 ZBTB40Q9NUA8 1239 aa15.22■□□□□ 0.03
PTCD2-211ENST00000536805 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
PTCD2-211ENST00000536805 ABCC3O15438 1527 aa15.22■□□□□ 0.03
PTCD2-211ENST00000536805 IPO8O15397 1037 aaKnown RBP15.21■□□□□ 0.03
PTCD2-211ENST00000536805 CYB5RLQ6IPT4 315 aa15.21■□□□□ 0.03
PTCD2-211ENST00000536805 SPRYD3Q8NCJ5 442 aa15.21■□□□□ 0.03
PTCD2-211ENST00000536805 TMEM132EQ6IEE7 984 aa15.21■□□□□ 0.02
PTCD2-211ENST00000536805 CDC42BPGQ6DT37 1551 aa15.21■□□□□ 0.02
PTCD2-211ENST00000536805 REREQ9P2R6 1566 aa15.21■□□□□ 0.02
PTCD2-211ENST00000536805 PTMSP20962 102 aa15.2■□□□□ 0.02
PTCD2-211ENST00000536805 NUCB1Q02818 461 aa15.2■□□□□ 0.02
PTCD2-211ENST00000536805 ALDH1L2Q3SY69 923 aa15.2■□□□□ 0.02
PTCD2-211ENST00000536805 CLTCQ00610 1675 aaKnown RBP15.2■□□□□ 0.02
PTCD2-211ENST00000536805 MLH3Q9UHC1 1453 aa15.19■□□□□ 0.02
PTCD2-211ENST00000536805 A0A1W2PP64 1363 aa15.19■□□□□ 0.02
PTCD2-211ENST00000536805 TMEM57Q8N5G2 664 aa15.19■□□□□ 0.02
PTCD2-211ENST00000536805 NOB1Q9ULX3 412 aaKnown RBP15.19■□□□□ 0.02
PTCD2-211ENST00000536805 PANK2Q9BZ23 570 aa15.19■□□□□ 0.02
PTCD2-211ENST00000536805 GZF1Q9H116 711 aaPredicted RBP15.19■□□□□ 0.02
PTCD2-211ENST00000536805 PNNQ9H307 717 aaKnown RBP15.18■□□□□ 0.02
PTCD2-211ENST00000536805 GRPEL1Q9HAV7 217 aa15.18■□□□□ 0.02
PTCD2-211ENST00000536805 ZFYVE9O95405 1425 aa15.18■□□□□ 0.02
PTCD2-211ENST00000536805 PPIP5K1Q6PFW1 1433 aa15.18■□□□□ 0.02
PTCD2-211ENST00000536805 POGZQ7Z3K3 1410 aa15.18■□□□□ 0.02
PTCD2-211ENST00000536805 BRPF1P55201 1214 aaPredicted RBP15.17■□□□□ 0.02
PTCD2-211ENST00000536805 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
PTCD2-211ENST00000536805 SIGLEC1Q9BZZ2 1709 aa15.17■□□□□ 0.02
PTCD2-211ENST00000536805 ASXL2Q76L83 1435 aa15.17■□□□□ 0.02
PTCD2-211ENST00000536805 ATAD2Q6PL18 1390 aa15.17■□□□□ 0.02
PTCD2-211ENST00000536805 VGFO15240 615 aaPredicted RBP15.17■□□□□ 0.02
PTCD2-211ENST00000536805 BMP2KLQ5H9B9 411 aa15.17■□□□□ 0.02
PTCD2-211ENST00000536805 GBP4Q96PP9 640 aa15.17■□□□□ 0.02
PTCD2-211ENST00000536805 CFAP65Q6ZU64 1925 aaKnown RBP15.16■□□□□ 0.02
PTCD2-211ENST00000536805 U2SURPO15042 1029 aaKnown RBP15.16■□□□□ 0.02
PTCD2-211ENST00000536805 CHMP4BQ9H444 224 aaKnown RBP15.16■□□□□ 0.02
PTCD2-211ENST00000536805 PNPLA6Q8IY17 1366 aa15.16■□□□□ 0.02
PTCD2-211ENST00000536805 SKOR2Q2VWA4 1001 aaPredicted RBP15.15■□□□□ 0.02
PTCD2-211ENST00000536805 CHD1LQ86WJ1 897 aa15.15■□□□□ 0.02
PTCD2-211ENST00000536805 PIK3R4Q99570 1358 aa15.15■□□□□ 0.02
PTCD2-211ENST00000536805 RAB3GAP1Q15042 981 aa15.15■□□□□ 0.02
PTCD2-211ENST00000536805 CABP2Q9NPB3 220 aa15.15■□□□□ 0.02
PTCD2-211ENST00000536805 KIF20BQ96Q89 1820 aa15.15■□□□□ 0.02
PTCD2-211ENST00000536805 TNPO1Q92973 898 aaKnown RBP15.14■□□□□ 0.01
PTCD2-211ENST00000536805 ARXQ96QS3 562 aa15.14■□□□□ 0.01
PTCD2-211ENST00000536805 PTCH1Q13635 1447 aa15.14■□□□□ 0.01
PTCD2-211ENST00000536805 RIPK4P57078 832 aa15.13■□□□□ 0.01
PTCD2-211ENST00000536805 GCC1Q96CN9 775 aa15.13■□□□□ 0.01
PTCD2-211ENST00000536805 CD163L1Q9NR16 1453 aa15.13■□□□□ 0.01
PTCD2-211ENST00000536805 LRRC7Q96NW7 1537 aa15.13■□□□□ 0.01
PTCD2-211ENST00000536805 HSP90AB1P08238 724 aaKnown RBP15.13■□□□□ 0.01
PTCD2-211ENST00000536805 LNPKQ9C0E8 428 aa15.12■□□□□ 0.01
PTCD2-211ENST00000536805 TERF2IPQ9NYB0 399 aa15.12■□□□□ 0.01
PTCD2-211ENST00000536805 PTPRMP28827 1452 aa15.12■□□□□ 0.01
PTCD2-211ENST00000536805 ARHGAP31Q2M1Z3 1444 aa15.12■□□□□ 0.01
PTCD2-211ENST00000536805 DIAPH1O60610 1272 aaKnown RBP15.11■□□□□ 0.01
PTCD2-211ENST00000536805 GGNBP2Q9H3C7 697 aa15.11■□□□□ 0.01
PTCD2-211ENST00000536805 FAM135BQ49AJ0 1406 aa15.11■□□□□ 0.01
PTCD2-211ENST00000536805 ARHGAP45Q92619 1136 aa15.11■□□□□ 0.01
PTCD2-211ENST00000536805 KIF2CQ99661 725 aa15.11■□□□□ 0.01
PTCD2-211ENST00000536805 FYB1O15117 783 aa15.1■□□□□ 0.01
PTCD2-211ENST00000536805 NAP1L5Q96NT1 182 aaPredicted RBP15.1■□□□□ 0.01
PTCD2-211ENST00000536805 ESPNB1AK53 854 aa15.09■□□□□ 0.01
PTCD2-211ENST00000536805 FCHSD2O94868 740 aa15.09■□□□□ 0.01
PTCD2-211ENST00000536805 K7ELQ4 463 aaPredicted RBP15.09■□□□□ 0.01
PTCD2-211ENST00000536805 SRPK2P78362 688 aaKnown RBP15.09■□□□□ 0.01
PTCD2-211ENST00000536805 GGT6Q6P531 493 aa15.09■□□□□ 0.01
PTCD2-211ENST00000536805 CLEC17AQ6ZS10 378 aa15.09■□□□□ 0.01
PTCD2-211ENST00000536805 IBTKQ9P2D0 1353 aaPredicted RBP15.08■□□□□ 0.01
PTCD2-211ENST00000536805 ZBTB7BO15156 539 aaPredicted RBP15.07■□□□□ 0
PTCD2-211ENST00000536805 CALD1Q05682 793 aaKnown RBP15.07■□□□□ 0
PTCD2-211ENST00000536805 CFAP44Q96MT7 982 aa15.07■□□□□ 0
PTCD2-211ENST00000536805 TBC1D9Q6ZT07 1266 aa15.06■□□□□ 0
PTCD2-211ENST00000536805 MRPL50Q8N5N7 158 aaKnown RBP15.06■□□□□ 0
PTCD2-211ENST00000536805 ABCC4O15439 1325 aa15.06■□□□□ 0
PTCD2-211ENST00000536805 ANKRD45Q5TZF3 282 aa15.05■□□□□ 0
PTCD2-211ENST00000536805 HDGFL2Q7Z4V5 671 aaPredicted RBP15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms