RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 PER1O15534 1290 aaPredicted RBP21.4■■□□□ 1.02
CNN1-202ENST00000535659 TTC21BQ7Z4L5 1316 aa21.4■■□□□ 1.02
CNN1-202ENST00000535659 AHDC1Q5TGY3 1603 aaPredicted RBP21.4■■□□□ 1.02
CNN1-202ENST00000535659 SSH2Q76I76 1423 aa21.39■■□□□ 1.02
CNN1-202ENST00000535659 MON2Q7Z3U7 1717 aa21.39■■□□□ 1.02
CNN1-202ENST00000535659 PXDNQ92626 1479 aa21.39■■□□□ 1.02
CNN1-202ENST00000535659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.39■■□□□ 1.01
CNN1-202ENST00000535659 KNSTRNQ9Y448 316 aa21.39■■□□□ 1.01
CNN1-202ENST00000535659 EDC4Q6P2E9 1401 aaKnown RBP21.38■■□□□ 1.01
CNN1-202ENST00000535659 LRRC59Q96AG4 307 aaKnown RBP21.38■■□□□ 1.01
CNN1-202ENST00000535659 SBNO1A3KN83 1393 aa21.37■■□□□ 1.01
CNN1-202ENST00000535659 NSD3Q9BZ95 1437 aa21.37■■□□□ 1.01
CNN1-202ENST00000535659 TTC21AQ8NDW8 1320 aa21.37■■□□□ 1.01
CNN1-202ENST00000535659 NRKQ7Z2Y5 1582 aa21.36■■□□□ 1.01
CNN1-202ENST00000535659 SPATA31A3Q5VYP0 1347 aa21.36■■□□□ 1.01
CNN1-202ENST00000535659 ABTB2Q8N961 1025 aa21.35■■□□□ 1.01
CNN1-202ENST00000535659 PHLPP1O60346 1717 aa21.35■■□□□ 1.01
CNN1-202ENST00000535659 LMOD2Q6P5Q4 547 aa21.34■■□□□ 1.01
CNN1-202ENST00000535659 TRPM3Q9HCF6 1732 aaPredicted RBP21.34■■□□□ 1.01
CNN1-202ENST00000535659 FYB1O15117 783 aa21.34■■□□□ 1.01
CNN1-202ENST00000535659 CGNL1Q0VF96 1302 aa21.34■■□□□ 1.01
CNN1-202ENST00000535659 NME9Q86XW9 330 aa21.33■■□□□ 1
CNN1-202ENST00000535659 COL16A1Q07092 1604 aaPredicted RBP21.32■■□□□ 1
CNN1-202ENST00000535659 TNS3Q68CZ2 1445 aa21.31■■□□□ 1
CNN1-202ENST00000535659 AMER1Q5JTC6 1135 aaPredicted RBP21.31■■□□□ 1
CNN1-202ENST00000535659 NLRP6P59044 892 aa21.3■■□□□ 1
CNN1-202ENST00000535659 NUTM2GQ5VZR2 741 aa21.3■■□□□ 1
CNN1-202ENST00000535659 NLRP13Q86W25 1043 aa21.3■■□□□ 1
CNN1-202ENST00000535659 PHF23Q9BUL5 403 aaPredicted RBP21.3■■□□□ 1
CNN1-202ENST00000535659 GGNBP2Q9H3C7 697 aa21.29■■□□□ 1
CNN1-202ENST00000535659 ZRANB1Q9UGI0 708 aa21.29■■□□□ 1
CNN1-202ENST00000535659 ARHGEF10O15013 1369 aa21.29■■□□□ 1
CNN1-202ENST00000535659 ALS2Q96Q42 1657 aa21.28■■□□□ 1
CNN1-202ENST00000535659 PIK3C2AO00443 1686 aa21.28■■□□□ 1
CNN1-202ENST00000535659 USP31Q70CQ4 1352 aa21.27■■□□□ 1
CNN1-202ENST00000535659 COG3Q96JB2 828 aa21.27■■□□□ 1
CNN1-202ENST00000535659 CC2D1BQ5T0F9 858 aaKnown RBP21.26■□□□□ 0.99
CNN1-202ENST00000535659 NPC1L1Q9UHC9 1359 aa21.26■□□□□ 0.99
CNN1-202ENST00000535659 KIF20BQ96Q89 1820 aa21.24■□□□□ 0.99
CNN1-202ENST00000535659 NSD2O96028 1365 aa21.24■□□□□ 0.99
CNN1-202ENST00000535659 PLEKHG5O94827 1062 aa21.24■□□□□ 0.99
CNN1-202ENST00000535659 CNGB1Q14028 1251 aaPredicted RBP21.24■□□□□ 0.99
CNN1-202ENST00000535659 MORC1Q86VD1 984 aa21.23■□□□□ 0.99
CNN1-202ENST00000535659 CABLES1Q8TDN4 633 aa21.23■□□□□ 0.99
CNN1-202ENST00000535659 PNPLA6Q8IY17 1366 aa21.23■□□□□ 0.99
CNN1-202ENST00000535659 JCADQ9P266 1359 aa21.23■□□□□ 0.99
CNN1-202ENST00000535659 OVOS2A0A0J9YW53 1432 aa21.21■□□□□ 0.99
CNN1-202ENST00000535659 OVOS2Q6IE36 1432 aa21.21■□□□□ 0.99
CNN1-202ENST00000535659 GCP02774 474 aa21.2■□□□□ 0.98
CNN1-202ENST00000535659 KCNH5Q8NCM2 988 aa21.2■□□□□ 0.98
CNN1-202ENST00000535659 USP19O94966 1318 aa21.2■□□□□ 0.98
CNN1-202ENST00000535659 USP54Q70EL1 1684 aa21.19■□□□□ 0.98
CNN1-202ENST00000535659 MARF1Q9Y4F3 1742 aaKnown RBP21.18■□□□□ 0.98
CNN1-202ENST00000535659 COL22A1Q8NFW1 1626 aaPredicted RBP21.18■□□□□ 0.98
CNN1-202ENST00000535659 SHPRHQ149N8 1683 aa21.18■□□□□ 0.98
CNN1-202ENST00000535659 HAP1P54257 671 aaPredicted RBP21.18■□□□□ 0.98
CNN1-202ENST00000535659 DIEXFQ68CQ4 756 aaKnown RBP21.17■□□□□ 0.98
CNN1-202ENST00000535659 ANKRD26Q9UPS8 1709 aa21.17■□□□□ 0.98
CNN1-202ENST00000535659 SOX12O15370 315 aa21.16■□□□□ 0.98
CNN1-202ENST00000535659 TNNT2P45379 298 aaPredicted RBP21.16■□□□□ 0.98
CNN1-202ENST00000535659 FBLN1P23142 703 aa21.15■□□□□ 0.98
CNN1-202ENST00000535659 RALBP1Q15311 655 aa21.15■□□□□ 0.98
CNN1-202ENST00000535659 SLIT3O75094 1523 aa21.15■□□□□ 0.98
CNN1-202ENST00000535659 SPATA31A6Q5VVP1 1343 aa21.15■□□□□ 0.98
CNN1-202ENST00000535659 PHRF1Q9P1Y6 1649 aaKnown RBP21.15■□□□□ 0.98
CNN1-202ENST00000535659 CRYBG1Q9Y4K1 1723 aa21.15■□□□□ 0.98
CNN1-202ENST00000535659 NUTM2BA6NNL0 878 aaPredicted RBP21.14■□□□□ 0.98
CNN1-202ENST00000535659 NUTM2EB1AL46 878 aaPredicted RBP21.14■□□□□ 0.98
CNN1-202ENST00000535659 NUTM2AQ8IVF1 878 aaPredicted RBP21.14■□□□□ 0.98
CNN1-202ENST00000535659 ANP32CO43423 234 aa21.14■□□□□ 0.97
CNN1-202ENST00000535659 PRKRIP1Q9H875 184 aaPredicted RBP21.14■□□□□ 0.97
CNN1-202ENST00000535659 ZC3H6P61129 1189 aaKnown RBP21.13■□□□□ 0.97
CNN1-202ENST00000535659 ABCA3Q99758 1704 aa21.12■□□□□ 0.97
CNN1-202ENST00000535659 RGS17Q9UGC6 210 aaPredicted RBP21.12■□□□□ 0.97
CNN1-202ENST00000535659 AATKQ6ZMQ8 1374 aa21.11■□□□□ 0.97
CNN1-202ENST00000535659 PARD3Q8TEW0 1356 aa21.11■□□□□ 0.97
CNN1-202ENST00000535659 ARHGEF25Q86VW2 580 aa21.1■□□□□ 0.97
CNN1-202ENST00000535659 NFAT5O94916 1531 aa21.1■□□□□ 0.97
CNN1-202ENST00000535659 RRS1Q15050 365 aaKnown RBP21.09■□□□□ 0.97
CNN1-202ENST00000535659 POLKQ9UBT6 870 aa21.09■□□□□ 0.97
CNN1-202ENST00000535659 ADAMTS2O95450 1211 aa21.09■□□□□ 0.97
CNN1-202ENST00000535659 PPP2R1AP30153 589 aa21.09■□□□□ 0.97
CNN1-202ENST00000535659 CPDO75976 1380 aa21.07■□□□□ 0.96
CNN1-202ENST00000535659 MAP3K19Q56UN5 1328 aa21.07■□□□□ 0.96
CNN1-202ENST00000535659 ZBTB7CA1YPR0 619 aa21.07■□□□□ 0.96
CNN1-202ENST00000535659 FAM83GA6ND36 823 aa21.07■□□□□ 0.96
CNN1-202ENST00000535659 KIAA0232Q92628 1395 aa21.06■□□□□ 0.96
CNN1-202ENST00000535659 AMPHP49418 695 aa21.06■□□□□ 0.96
CNN1-202ENST00000535659 PRDM11Q9NQV5 511 aa21.06■□□□□ 0.96
CNN1-202ENST00000535659 EMILIN1Q9Y6C2 1016 aa21.06■□□□□ 0.96
CNN1-202ENST00000535659 PPM1GO15355 546 aaPredicted RBP21.05■□□□□ 0.96
CNN1-202ENST00000535659 MTHFSP49914 203 aa21.05■□□□□ 0.96
CNN1-202ENST00000535659 CHRNA2Q15822 529 aa21.04■□□□□ 0.96
CNN1-202ENST00000535659 MYBBP1AQ9BQG0 1328 aaKnown RBP21.04■□□□□ 0.96
CNN1-202ENST00000535659 LRP6O75581 1613 aa21.04■□□□□ 0.96
CNN1-202ENST00000535659 IP6K1Q92551 441 aa21.04■□□□□ 0.96
CNN1-202ENST00000535659 HOXC9P31274 260 aa21.02■□□□□ 0.96
CNN1-202ENST00000535659 MEX3CQ5U5Q3 659 aaKnown RBP21.02■□□□□ 0.96
CNN1-202ENST00000535659 KIF24Q5T7B8 1368 aa21.02■□□□□ 0.96
CNN1-202ENST00000535659 AXIN2Q9Y2T1 843 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms