RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 SCAPERQ9BY12 1400 aa11.38□□□□□ -0.59
TNC-210ENST00000535648 TAF3Q5VWG9 929 aa11.38□□□□□ -0.59
TNC-210ENST00000535648 GAS2L2Q8NHY3 880 aa11.38□□□□□ -0.59
TNC-210ENST00000535648 MAGEC2Q9UBF1 373 aaPredicted RBP11.38□□□□□ -0.59
TNC-210ENST00000535648 CWC15Q9P013 229 aaKnown RBP11.38□□□□□ -0.59
TNC-210ENST00000535648 ZNF396Q96N95 335 aaPredicted RBP11.38□□□□□ -0.59
TNC-210ENST00000535648 RUSC2Q8N2Y8 1516 aa11.38□□□□□ -0.59
TNC-210ENST00000535648 BACH2Q9BYV9 841 aa11.37□□□□□ -0.59
TNC-210ENST00000535648 CDK5RAP3Q96JB5 506 aa11.37□□□□□ -0.59
TNC-210ENST00000535648 CALRP27797 417 aaKnown RBP11.37□□□□□ -0.59
TNC-210ENST00000535648 IKQ13123 557 aaPredicted RBP11.37□□□□□ -0.59
TNC-210ENST00000535648 TSPY26PQ9H489 355 aa11.37□□□□□ -0.59
TNC-210ENST00000535648 NLRP2Q9NX02 1062 aa11.36□□□□□ -0.59
TNC-210ENST00000535648 TRIM5Q9C035 493 aa11.36□□□□□ -0.59
TNC-210ENST00000535648 CABP2Q9NPB3 220 aa11.36□□□□□ -0.59
TNC-210ENST00000535648 FGD5Q6ZNL6 1462 aa11.36□□□□□ -0.59
TNC-210ENST00000535648 SMC2O95347 1197 aa11.36□□□□□ -0.59
TNC-210ENST00000535648 GGNBP2Q9H3C7 697 aa11.36□□□□□ -0.59
TNC-210ENST00000535648 GPRASP1Q5JY77 1395 aa11.36□□□□□ -0.59
TNC-210ENST00000535648 PIP4K2AP48426 406 aaPredicted RBP11.36□□□□□ -0.59
TNC-210ENST00000535648 HMGN5P82970 282 aaKnown RBP11.36□□□□□ -0.59
TNC-210ENST00000535648 CCDC66A2RUB6 948 aa11.35□□□□□ -0.59
TNC-210ENST00000535648 DHX8Q14562 1220 aaKnown RBP11.35□□□□□ -0.59
TNC-210ENST00000535648 WWC2Q6AWC2 1192 aa11.35□□□□□ -0.59
TNC-210ENST00000535648 LRRC9Q6ZRR7 1453 aa11.35□□□□□ -0.59
TNC-210ENST00000535648 RABEP1Q15276 862 aa11.35□□□□□ -0.59
TNC-210ENST00000535648 GCC1Q96CN9 775 aa11.35□□□□□ -0.59
TNC-210ENST00000535648 ANKRD50Q9ULJ7 1429 aa11.35□□□□□ -0.59
TNC-210ENST00000535648 CYB5RLQ6IPT4 315 aa11.35□□□□□ -0.59
TNC-210ENST00000535648 SURF6O75683 361 aaKnown RBP11.35□□□□□ -0.59
TNC-210ENST00000535648 DNAJC2Q99543 621 aaKnown RBP11.35□□□□□ -0.59
TNC-210ENST00000535648 TRAK2O60296 914 aa11.34□□□□□ -0.59
TNC-210ENST00000535648 PLEKHO1Q53GL0 409 aaPredicted RBP11.34□□□□□ -0.59
TNC-210ENST00000535648 CCDC191Q8NCU4 936 aa11.34□□□□□ -0.59
TNC-210ENST00000535648 GNAI2P04899 355 aa11.34□□□□□ -0.59
TNC-210ENST00000535648 SYCP1Q15431 976 aa11.34□□□□□ -0.59
TNC-210ENST00000535648 CAVIN1Q6NZI2 390 aaKnown RBP11.34□□□□□ -0.59
TNC-210ENST00000535648 CCAR1Q8IX12 1150 aaKnown RBP11.34□□□□□ -0.59
TNC-210ENST00000535648 TTC39AQ5SRH9 613 aa11.34□□□□□ -0.59
TNC-210ENST00000535648 TTLL5Q6EMB2 1281 aa11.34□□□□□ -0.59
TNC-210ENST00000535648 OSCARQ8IYS5 282 aa11.34□□□□□ -0.59
TNC-210ENST00000535648 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.34□□□□□ -0.59
TNC-210ENST00000535648 MTHFSP49914 203 aa11.33□□□□□ -0.6
TNC-210ENST00000535648 NLRP6P59044 892 aa11.33□□□□□ -0.6
TNC-210ENST00000535648 ANKRD1Q15327 319 aa11.33□□□□□ -0.6
TNC-210ENST00000535648 MTMR7Q9Y216 660 aa11.33□□□□□ -0.6
TNC-210ENST00000535648 JMYQ8N9B5 988 aa11.33□□□□□ -0.6
TNC-210ENST00000535648 GNL3LQ9NVN8 582 aaKnown RBP11.33□□□□□ -0.6
TNC-210ENST00000535648 TMEM132AQ24JP5 1023 aa11.33□□□□□ -0.6
TNC-210ENST00000535648 CCDC158Q5M9N0 1113 aa11.33□□□□□ -0.6
TNC-210ENST00000535648 NEK4P51957 841 aa11.33□□□□□ -0.6
TNC-210ENST00000535648 ADAMTS8Q9UP79 889 aa11.32□□□□□ -0.6
TNC-210ENST00000535648 NUTM2GQ5VZR2 741 aa11.32□□□□□ -0.6
TNC-210ENST00000535648 ABTB2Q8N961 1025 aa11.32□□□□□ -0.6
TNC-210ENST00000535648 AEBP1Q8IUX7 1158 aa11.32□□□□□ -0.6
TNC-210ENST00000535648 RNF214Q8ND24 703 aa11.32□□□□□ -0.6
TNC-210ENST00000535648 PDCL3Q9H2J4 239 aa11.32□□□□□ -0.6
TNC-210ENST00000535648 H0YHG0 523 aa11.32□□□□□ -0.6
TNC-210ENST00000535648 DACH1Q9UI36 760 aa11.32□□□□□ -0.6
TNC-210ENST00000535648 ERLIN2O94905 339 aa11.32□□□□□ -0.6
TNC-210ENST00000535648 KDM4AO75164 1064 aa11.31□□□□□ -0.6
TNC-210ENST00000535648 ZNHIT6Q9NWK9 470 aaKnown RBP11.31□□□□□ -0.6
TNC-210ENST00000535648 C11orf95C9JLR9 678 aaPredicted RBP11.31□□□□□ -0.6
TNC-210ENST00000535648 NCOA2Q15596 1464 aa11.31□□□□□ -0.6
TNC-210ENST00000535648 KRT18P05783 430 aaKnown RBP11.31□□□□□ -0.6
TNC-210ENST00000535648 TXLNBQ8N3L3 684 aa11.31□□□□□ -0.6
TNC-210ENST00000535648 FAM69CQ0P6D2 419 aa11.31□□□□□ -0.6
TNC-210ENST00000535648 STK38Q15208 465 aa11.31□□□□□ -0.6
TNC-210ENST00000535648 LUC7LQ9NQ29 371 aaKnown RBP11.31□□□□□ -0.6
TNC-210ENST00000535648 TCP11L2Q8N4U5 519 aa11.31□□□□□ -0.6
TNC-210ENST00000535648 CNNM1Q9NRU3 951 aa11.31□□□□□ -0.6
TNC-210ENST00000535648 CCT4P50991 539 aaKnown RBP11.3□□□□□ -0.6
TNC-210ENST00000535648 PRPF40AO75400 957 aaKnown RBP11.3□□□□□ -0.6
TNC-210ENST00000535648 TWISTNBQ3B726 338 aaPredicted RBP11.3□□□□□ -0.6
TNC-210ENST00000535648 STIM1Q13586 685 aa11.3□□□□□ -0.6
TNC-210ENST00000535648 CASKIN1Q8WXD9 1431 aa11.3□□□□□ -0.6
TNC-210ENST00000535648 PDE3AQ14432 1141 aa11.3□□□□□ -0.6
TNC-210ENST00000535648 BCL11BQ9C0K0 894 aaPredicted RBP11.3□□□□□ -0.6
TNC-210ENST00000535648 CYP46A1Q9Y6A2 500 aa11.3□□□□□ -0.6
TNC-210ENST00000535648 BRPF1P55201 1214 aaPredicted RBP11.29□□□□□ -0.6
TNC-210ENST00000535648 ZRSR2Q15696 482 aaKnown RBP11.29□□□□□ -0.6
TNC-210ENST00000535648 NOB1Q9ULX3 412 aaKnown RBP11.29□□□□□ -0.6
TNC-210ENST00000535648 PPP2R1AP30153 589 aa11.29□□□□□ -0.6
TNC-210ENST00000535648 PDZRN3Q9UPQ7 1066 aa11.29□□□□□ -0.6
TNC-210ENST00000535648 ESPNB1AK53 854 aa11.29□□□□□ -0.6
TNC-210ENST00000535648 CCDC192P0DO97 292 aa11.29□□□□□ -0.6
TNC-210ENST00000535648 PRKAR2BP31323 418 aa11.29□□□□□ -0.6
TNC-210ENST00000535648 TMEM132EQ6IEE7 984 aa11.29□□□□□ -0.6
TNC-210ENST00000535648 LEKR1Q6ZMV7 388 aa11.29□□□□□ -0.6
TNC-210ENST00000535648 TRIM22Q8IYM9 498 aa11.29□□□□□ -0.6
TNC-210ENST00000535648 LRRCC1Q9C099 1032 aa11.29□□□□□ -0.6
TNC-210ENST00000535648 ATP2B1P20020 1258 aa11.28□□□□□ -0.6
TNC-210ENST00000535648 NACAP1Q9BZK3 213 aa11.28□□□□□ -0.6
TNC-210ENST00000535648 GOLGA6L10A6NI86 522 aa11.28□□□□□ -0.6
TNC-210ENST00000535648 SERPINC1P01008 464 aa11.28□□□□□ -0.6
TNC-210ENST00000535648 CT47B1P0C2W7 299 aaPredicted RBP11.28□□□□□ -0.6
TNC-210ENST00000535648 PNISRQ8TF01 805 aaKnown RBP11.28□□□□□ -0.6
TNC-210ENST00000535648 SUPT6HQ7KZ85 1726 aaKnown RBP11.28□□□□□ -0.6
TNC-210ENST00000535648 CCDC69A6NI79 296 aa11.28□□□□□ -0.6
TNC-210ENST00000535648 ZSCAN25Q6NSZ9 544 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms