RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 AMER1Q5JTC6 1135 aaPredicted RBP16.77■□□□□ 0.27
SCARB1-204ENST00000535005 TTC21BQ7Z4L5 1316 aa16.76■□□□□ 0.27
SCARB1-204ENST00000535005 TTC21AQ8NDW8 1320 aa16.76■□□□□ 0.27
SCARB1-204ENST00000535005 KRT28Q7Z3Y7 464 aa16.75■□□□□ 0.27
SCARB1-204ENST00000535005 CGNL1Q0VF96 1302 aa16.75■□□□□ 0.27
SCARB1-204ENST00000535005 NRKQ7Z2Y5 1582 aa16.75■□□□□ 0.27
SCARB1-204ENST00000535005 NSD2O96028 1365 aa16.74■□□□□ 0.27
SCARB1-204ENST00000535005 SOS2Q07890 1332 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-204ENST00000535005 ROBO1Q9Y6N7 1651 aa16.74■□□□□ 0.27
SCARB1-204ENST00000535005 PXDNQ92626 1479 aa16.73■□□□□ 0.27
SCARB1-204ENST00000535005 SBNO1A3KN83 1393 aa16.73■□□□□ 0.27
SCARB1-204ENST00000535005 FYB1O15117 783 aa16.73■□□□□ 0.27
SCARB1-204ENST00000535005 NHSL1Q5SYE7 1610 aa16.73■□□□□ 0.27
SCARB1-204ENST00000535005 AHDC1Q5TGY3 1603 aaPredicted RBP16.72■□□□□ 0.27
SCARB1-204ENST00000535005 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.72■□□□□ 0.272e-8■□□□□ 8.6
SCARB1-204ENST00000535005 DDX17Q92841 729 aaKnown RBP16.72■□□□□ 0.27
SCARB1-204ENST00000535005 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.27
SCARB1-204ENST00000535005 TRPM3Q9HCF6 1732 aaPredicted RBP16.71■□□□□ 0.27
SCARB1-204ENST00000535005 USP31Q70CQ4 1352 aa16.71■□□□□ 0.27
SCARB1-204ENST00000535005 PIP4K2BP78356 416 aa16.7■□□□□ 0.26
SCARB1-204ENST00000535005 XPCQ01831 940 aaPredicted RBP16.7■□□□□ 0.26
SCARB1-204ENST00000535005 NME9Q86XW9 330 aa16.7■□□□□ 0.26
SCARB1-204ENST00000535005 SPATA31A3Q5VYP0 1347 aa16.69■□□□□ 0.26
SCARB1-204ENST00000535005 PAK3O75914 559 aaPredicted RBP16.68■□□□□ 0.26
SCARB1-204ENST00000535005 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
SCARB1-204ENST00000535005 GGNBP2Q9H3C7 697 aa16.68■□□□□ 0.26
SCARB1-204ENST00000535005 TNS3Q68CZ2 1445 aa16.67■□□□□ 0.26
SCARB1-204ENST00000535005 ANP32CO43423 234 aa16.67■□□□□ 0.26
SCARB1-204ENST00000535005 RALBP1Q15311 655 aa16.67■□□□□ 0.26
SCARB1-204ENST00000535005 ABTB2Q8N961 1025 aa16.67■□□□□ 0.26
SCARB1-204ENST00000535005 PRKRIP1Q9H875 184 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-204ENST00000535005 PARD3Q8TEW0 1356 aa16.67■□□□□ 0.26
SCARB1-204ENST00000535005 KIF20BQ96Q89 1820 aa16.67■□□□□ 0.26
SCARB1-204ENST00000535005 OVOS2A0A0J9YW53 1432 aa16.66■□□□□ 0.26
SCARB1-204ENST00000535005 OVOS2Q6IE36 1432 aa16.66■□□□□ 0.26
SCARB1-204ENST00000535005 PIK3C2AO00443 1686 aa16.66■□□□□ 0.26
SCARB1-204ENST00000535005 USP54Q70EL1 1684 aa16.66■□□□□ 0.26
SCARB1-204ENST00000535005 ALS2Q96Q42 1657 aa16.66■□□□□ 0.26
SCARB1-204ENST00000535005 COG3Q96JB2 828 aa16.66■□□□□ 0.26
SCARB1-204ENST00000535005 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
SCARB1-204ENST00000535005 ARHGEF10O15013 1369 aa16.65■□□□□ 0.26
SCARB1-204ENST00000535005 NLRP6P59044 892 aa16.65■□□□□ 0.26
SCARB1-204ENST00000535005 MORC1Q86VD1 984 aa16.65■□□□□ 0.26
SCARB1-204ENST00000535005 NLRP13Q86W25 1043 aa16.65■□□□□ 0.26
SCARB1-204ENST00000535005 LRRC59Q96AG4 307 aaKnown RBP16.65■□□□□ 0.26
SCARB1-204ENST00000535005 ANKRD26Q9UPS8 1709 aa16.64■□□□□ 0.25
SCARB1-204ENST00000535005 COL16A1Q07092 1604 aaPredicted RBP16.62■□□□□ 0.25
SCARB1-204ENST00000535005 USP19O94966 1318 aa16.62■□□□□ 0.25
SCARB1-204ENST00000535005 PHLPP1O60346 1717 aa16.62■□□□□ 0.25
SCARB1-204ENST00000535005 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
SCARB1-204ENST00000535005 LMOD2Q6P5Q4 547 aa16.61■□□□□ 0.25
SCARB1-204ENST00000535005 AATKQ6ZMQ8 1374 aa16.6■□□□□ 0.25
SCARB1-204ENST00000535005 MARF1Q9Y4F3 1742 aaKnown RBP16.6■□□□□ 0.25
SCARB1-204ENST00000535005 NUTM2GQ5VZR2 741 aa16.6■□□□□ 0.25
SCARB1-204ENST00000535005 MED1Q15648 1581 aaPredicted RBP16.6■□□□□ 0.25
SCARB1-204ENST00000535005 SLIT3O75094 1523 aa16.59■□□□□ 0.25
SCARB1-204ENST00000535005 ANP32EQ9BTT0 268 aa16.59■□□□□ 0.25
SCARB1-204ENST00000535005 KCNH5Q8NCM2 988 aa16.59■□□□□ 0.25
SCARB1-204ENST00000535005 MYBBP1AQ9BQG0 1328 aaKnown RBP16.58■□□□□ 0.25
SCARB1-204ENST00000535005 PPP2R1AP30153 589 aa16.58■□□□□ 0.24
SCARB1-204ENST00000535005 PNPLA6Q8IY17 1366 aa16.57■□□□□ 0.24
SCARB1-204ENST00000535005 GCP02774 474 aa16.56■□□□□ 0.24
SCARB1-204ENST00000535005 TSHZ2Q9NRE2 1034 aa16.56■□□□□ 0.24
SCARB1-204ENST00000535005 COL22A1Q8NFW1 1626 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-204ENST00000535005 HSPA1LP34931 641 aa16.55■□□□□ 0.24
SCARB1-204ENST00000535005 TNNT2P45379 298 aaPredicted RBP16.55■□□□□ 0.24
SCARB1-204ENST00000535005 NFAT5O94916 1531 aa16.55■□□□□ 0.24
SCARB1-204ENST00000535005 CRYBG1Q9Y4K1 1723 aa16.54■□□□□ 0.24
SCARB1-204ENST00000535005 FBXO41Q8TF61 875 aa16.54■□□□□ 0.24
SCARB1-204ENST00000535005 JCADQ9P266 1359 aa16.54■□□□□ 0.24
SCARB1-204ENST00000535005 CCER2I3L3R5 266 aa16.54■□□□□ 0.24
SCARB1-204ENST00000535005 POLKQ9UBT6 870 aa16.54■□□□□ 0.24
SCARB1-204ENST00000535005 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
SCARB1-204ENST00000535005 FBLN1P23142 703 aa16.53■□□□□ 0.24
SCARB1-204ENST00000535005 CABLES1Q8TDN4 633 aa16.53■□□□□ 0.24
SCARB1-204ENST00000535005 PHRF1Q9P1Y6 1649 aaKnown RBP16.53■□□□□ 0.24
SCARB1-204ENST00000535005 KIF24Q5T7B8 1368 aa16.53■□□□□ 0.24
SCARB1-204ENST00000535005 MTHFSP49914 203 aa16.52■□□□□ 0.24
SCARB1-204ENST00000535005 ARHGEF25Q86VW2 580 aa16.52■□□□□ 0.23
SCARB1-204ENST00000535005 CPDO75976 1380 aa16.51■□□□□ 0.23
SCARB1-204ENST00000535005 SHPRHQ149N8 1683 aa16.51■□□□□ 0.23
SCARB1-204ENST00000535005 MAP3K19Q56UN5 1328 aa16.51■□□□□ 0.23
SCARB1-204ENST00000535005 INSRP06213 1382 aa16.51■□□□□ 0.23
SCARB1-204ENST00000535005 SOX12O15370 315 aa16.5■□□□□ 0.23
SCARB1-204ENST00000535005 RRS1Q15050 365 aaKnown RBP16.5■□□□□ 0.23
SCARB1-204ENST00000535005 EMILIN1Q9Y6C2 1016 aa16.49■□□□□ 0.23
SCARB1-204ENST00000535005 ABCA3Q99758 1704 aa16.49■□□□□ 0.23
SCARB1-204ENST00000535005 MAP2P11137 1827 aaKnown RBP16.49■□□□□ 0.23
SCARB1-204ENST00000535005 RTL1A6NKG5 1358 aa16.48■□□□□ 0.23
SCARB1-204ENST00000535005 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
SCARB1-204ENST00000535005 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
SCARB1-204ENST00000535005 SPATA31A6Q5VVP1 1343 aa16.47■□□□□ 0.23
SCARB1-204ENST00000535005 FLT4P35916 1363 aa16.47■□□□□ 0.23
SCARB1-204ENST00000535005 HAP1P54257 671 aaPredicted RBP16.47■□□□□ 0.23
SCARB1-204ENST00000535005 ZC3H6P61129 1189 aaKnown RBP16.47■□□□□ 0.23
SCARB1-204ENST00000535005 CCDC184Q52MB2 194 aa16.47■□□□□ 0.23
SCARB1-204ENST00000535005 IP6K1Q92551 441 aa16.47■□□□□ 0.23
SCARB1-204ENST00000535005 CFAP53Q96M91 514 aa16.47■□□□□ 0.23
SCARB1-204ENST00000535005 KIAA0232Q92628 1395 aa16.46■□□□□ 0.23
SCARB1-204ENST00000535005 ABCC6O95255 1503 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms