RNA–Protein interactions for RNA: ENST00000534484.1

LMO1-204, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LMO1, Length 770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-204ENST00000534484 NALCNQ8IZF0 1738 aa17.87■□□□□ 0.45
LMO1-204ENST00000534484 NPHP4O75161 1426 aaPredicted RBP17.87■□□□□ 0.45
LMO1-204ENST00000534484 RGPD8O14715 1765 aaPredicted RBP17.86■□□□□ 0.45
LMO1-204ENST00000534484 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
LMO1-204ENST00000534484 USP6P35125 1406 aa17.85■□□□□ 0.45
LMO1-204ENST00000534484 TRMT2AQ8IZ69 625 aaKnown RBP17.85■□□□□ 0.45
LMO1-204ENST00000534484 USP54Q70EL1 1684 aa17.84■□□□□ 0.45
LMO1-204ENST00000534484 KCNA6P17658 529 aa17.84■□□□□ 0.45
LMO1-204ENST00000534484 RUNDC1Q96C34 613 aa17.84■□□□□ 0.45
LMO1-204ENST00000534484 CDK12Q9NYV4 1490 aaPredicted RBP17.83■□□□□ 0.45
LMO1-204ENST00000534484 NCKAP5LQ9HCH0 1330 aa17.83■□□□□ 0.44
LMO1-204ENST00000534484 APAF1O14727 1248 aa17.83■□□□□ 0.44
LMO1-204ENST00000534484 CDCA7LQ96GN5 454 aa17.83■□□□□ 0.44
LMO1-204ENST00000534484 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.44
LMO1-204ENST00000534484 ACEP12821 1306 aa17.82■□□□□ 0.44
LMO1-204ENST00000534484 OVOS2A0A0J9YW53 1432 aa17.81■□□□□ 0.44
LMO1-204ENST00000534484 OVOS2Q6IE36 1432 aa17.81■□□□□ 0.44
LMO1-204ENST00000534484 TTC21BQ7Z4L5 1316 aa17.81■□□□□ 0.44
LMO1-204ENST00000534484 SENP3-EIF4A1A0A087X0R7 540 aa17.81■□□□□ 0.44
LMO1-204ENST00000534484 GOLGA2Q08379 1002 aa17.81■□□□□ 0.44
LMO1-204ENST00000534484 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
LMO1-204ENST00000534484 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.81■□□□□ 0.44
LMO1-204ENST00000534484 CCDC146Q8IYE0 955 aa17.81■□□□□ 0.44
LMO1-204ENST00000534484 SALL2Q9Y467 1007 aaPredicted RBP17.81■□□□□ 0.44
LMO1-204ENST00000534484 LRRC7Q96NW7 1537 aa17.81■□□□□ 0.44
LMO1-204ENST00000534484 SLFN5Q08AF3 891 aa17.8■□□□□ 0.44
LMO1-204ENST00000534484 DUSP27Q5VZP5 1158 aa17.8■□□□□ 0.44
LMO1-204ENST00000534484 POLKQ9UBT6 870 aa17.8■□□□□ 0.44
LMO1-204ENST00000534484 RCAN3Q9UKA8 241 aa17.8■□□□□ 0.44
LMO1-204ENST00000534484 TTC21AQ8NDW8 1320 aa17.79■□□□□ 0.44
LMO1-204ENST00000534484 NME9Q86XW9 330 aa17.79■□□□□ 0.44
LMO1-204ENST00000534484 ADGRL3Q9HAR2 1447 aa17.79■□□□□ 0.44
LMO1-204ENST00000534484 USP31Q70CQ4 1352 aa17.79■□□□□ 0.44
LMO1-204ENST00000534484 DIAPH1O60610 1272 aaKnown RBP17.77■□□□□ 0.44
LMO1-204ENST00000534484 COG3Q96JB2 828 aa17.77■□□□□ 0.44
LMO1-204ENST00000534484 PPP4R2Q9NY27 417 aa17.77■□□□□ 0.44
LMO1-204ENST00000534484 PLEKHF1Q96S99 279 aa17.76■□□□□ 0.43
LMO1-204ENST00000534484 E9PSI1 815 aa17.75■□□□□ 0.43
LMO1-204ENST00000534484 RRP1P56182 461 aaKnown RBP17.75■□□□□ 0.43
LMO1-204ENST00000534484 WWC1Q8IX03 1113 aa17.75■□□□□ 0.43
LMO1-204ENST00000534484 TCP11L2Q8N4U5 519 aa17.75■□□□□ 0.43
LMO1-204ENST00000534484 PIK3C2AO00443 1686 aa17.74■□□□□ 0.43
LMO1-204ENST00000534484 U2AF1L5P0DN76 240 aaPredicted RBP17.74■□□□□ 0.43
LMO1-204ENST00000534484 U2AF1Q01081 240 aaKnown RBP eCLIP17.74■□□□□ 0.43
LMO1-204ENST00000534484 WDR63Q8IWG1 891 aa17.74■□□□□ 0.43
LMO1-204ENST00000534484 PNNQ9H307 717 aaKnown RBP17.74■□□□□ 0.43
LMO1-204ENST00000534484 MARF1Q9Y4F3 1742 aaKnown RBP17.74■□□□□ 0.43
LMO1-204ENST00000534484 IRX6P78412 446 aaPredicted RBP17.73■□□□□ 0.43
LMO1-204ENST00000534484 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
LMO1-204ENST00000534484 ZRANB1Q9UGI0 708 aa17.73■□□□□ 0.43
LMO1-204ENST00000534484 FCHSD2O94868 740 aa17.71■□□□□ 0.43
LMO1-204ENST00000534484 IL13P35225 146 aa17.7■□□□□ 0.42
LMO1-204ENST00000534484 SPINK5Q9NQ38 1064 aaPredicted RBP17.7■□□□□ 0.42
LMO1-204ENST00000534484 RGPD1P0DJD0 1748 aa17.69■□□□□ 0.42
LMO1-204ENST00000534484 PEAK1Q9H792 1746 aa17.69■□□□□ 0.42
LMO1-204ENST00000534484 NUTM2FA1L443 756 aa17.69■□□□□ 0.42
LMO1-204ENST00000534484 EMILIN1Q9Y6C2 1016 aa17.69■□□□□ 0.42
LMO1-204ENST00000534484 NCOA3Q9Y6Q9 1424 aa17.69■□□□□ 0.42
LMO1-204ENST00000534484 NGDNQ8NEJ9 315 aaKnown RBP17.68■□□□□ 0.42
LMO1-204ENST00000534484 U2SURPO15042 1029 aaKnown RBP17.67■□□□□ 0.42
LMO1-204ENST00000534484 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
LMO1-204ENST00000534484 RSPH6AQ9H0K4 717 aa17.67■□□□□ 0.42
LMO1-204ENST00000534484 DMRT2Q9Y5R5 561 aa17.67■□□□□ 0.42
LMO1-204ENST00000534484 KIF24Q5T7B8 1368 aa17.66■□□□□ 0.42
LMO1-204ENST00000534484 STRCP1A6NGW2 1772 aa17.66■□□□□ 0.42
LMO1-204ENST00000534484 FBLN1P23142 703 aa17.66■□□□□ 0.42
LMO1-204ENST00000534484 TMPOP42166 694 aaKnown RBP17.66■□□□□ 0.42
LMO1-204ENST00000534484 IL16Q14005 1332 aa17.66■□□□□ 0.42
LMO1-204ENST00000534484 KIF1AQ12756 1690 aa17.64■□□□□ 0.42
LMO1-204ENST00000534484 PHF8Q9UPP1 1060 aa17.64■□□□□ 0.41
LMO1-204ENST00000534484 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
LMO1-204ENST00000534484 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
LMO1-204ENST00000534484 TRIM35Q9UPQ4 493 aa17.63■□□□□ 0.41
LMO1-204ENST00000534484 DCCP43146 1447 aa17.63■□□□□ 0.41
LMO1-204ENST00000534484 RRP7AQ9Y3A4 280 aaKnown RBP17.62■□□□□ 0.41
LMO1-204ENST00000534484 SBNO1A3KN83 1393 aa17.62■□□□□ 0.41
LMO1-204ENST00000534484 PHRF1Q9P1Y6 1649 aaKnown RBP17.61■□□□□ 0.41
LMO1-204ENST00000534484 LMTK3Q96Q04 1460 aa17.61■□□□□ 0.41
LMO1-204ENST00000534484 STRCQ7RTU9 1775 aa17.61■□□□□ 0.41
LMO1-204ENST00000534484 DLG5Q8TDM6 1919 aa17.6■□□□□ 0.41
LMO1-204ENST00000534484 PPM1GO15355 546 aaPredicted RBP17.6■□□□□ 0.41
LMO1-204ENST00000534484 MST1RQ04912 1400 aa17.6■□□□□ 0.41
LMO1-204ENST00000534484 TRPM3Q9HCF6 1732 aaPredicted RBP17.6■□□□□ 0.41
LMO1-204ENST00000534484 FLT4P35916 1363 aa17.59■□□□□ 0.41
LMO1-204ENST00000534484 KDM4FA0A1W2PPD8 638 aa17.59■□□□□ 0.41
LMO1-204ENST00000534484 CT47B1P0C2W7 299 aaPredicted RBP17.59■□□□□ 0.41
LMO1-204ENST00000534484 PRKAR2BP31323 418 aa17.59■□□□□ 0.41
LMO1-204ENST00000534484 NEUROD2Q15784 382 aa17.59■□□□□ 0.41
LMO1-204ENST00000534484 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.59■□□□□ 0.41
LMO1-204ENST00000534484 MYH16Q9H6N6 1097 aa17.59■□□□□ 0.41
LMO1-204ENST00000534484 MAP3K19Q56UN5 1328 aa17.58■□□□□ 0.4
LMO1-204ENST00000534484 EIF4A2Q14240 407 aaKnown RBP17.58■□□□□ 0.4
LMO1-204ENST00000534484 NFE2L2Q16236 605 aa17.58■□□□□ 0.4
LMO1-204ENST00000534484 PROSER2Q86WR7 435 aaPredicted RBP17.58■□□□□ 0.4
LMO1-204ENST00000534484 C19orf44Q9H6X5 657 aa17.57■□□□□ 0.4
LMO1-204ENST00000534484 NFAT5O94916 1531 aa17.57■□□□□ 0.4
LMO1-204ENST00000534484 C1orf167Q5SNV9 1468 aa17.56■□□□□ 0.4
LMO1-204ENST00000534484 RTL1A6NKG5 1358 aa17.56■□□□□ 0.4
LMO1-204ENST00000534484 ARHGEF10O15013 1369 aa17.56■□□□□ 0.4
LMO1-204ENST00000534484 NEFMP07197 916 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms